AT5G06260 : -
Query Information
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AGICode AT5G06260
Description TLD-domain containing nucleolar protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G06260 TLD-domain containing nucleolar protein 1 0.3 -0.34
2 AT3G03720 cationic amino acid transporter 4 cationic amino acid transporter 4 0.86 0.31 -0.3
3 AT3G60130 beta glucosidase 16 beta glucosidase 16 0.86 0.31 -0.33
4 AT1G49300 RAB GTPase homolog G3E ARABIDOPSIS RAB GTPASE HOMOLOG 7,
ARABIDOPSIS RAB GTPASE HOMOLOG
G3E, RAB GTPase homolog G3E		 0.85 0.32 -0.33
5 AT1G76490 hydroxy methylglutaryl CoA reductase 1 AtHMGR1, hydroxy methylglutaryl
CoA reductase 1,
3-HYDROXY-3-METHYLGLUTARYL COA
REDUCTASE 1		 0.85 0.31 -0.31
6 AT3G24200 FAD/NAD(P)-binding oxidoreductase family protein 0.84 0.33 -0.31
7 AT3G46000 actin depolymerizing factor 2 actin depolymerizing factor 2 0.84 0.3 -0.31
8 AT5G54870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27020.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.84 0.31 -0.32
9 AT5G64560 magnesium transporter 9 ATMGT9, magnesium transporter 9,
MRS2-2		 0.84 0.35 -0.32
10 AT5G03660 Family of unknown function (DUF662) 0.83 0.32 -0.32
11 AT4G15940 Fumarylacetoacetate (FAA) hydrolase family 0.83 0.33 -0.34
12 AT5G49890 chloride channel C ATCLC-C, chloride channel C 0.83 0.32 -0.34
13 AT2G24860 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.83 0.31 -0.34
14 AT1G68300 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.83 0.29 -0.31
15 AT3G03890 FMN binding 0.82 0.31 -0.32
16 AT1G76130 alpha-amylase-like 2 alpha-amylase-like 2, ARABIDOPSIS
THALIANA ALPHA-AMYLASE-LIKE 2		 0.82 0.3 -0.32
17 AT3G16190 Isochorismatase family protein 0.82 0.31 -0.33
18 AT1G01710 Acyl-CoA thioesterase family protein 0.82 0.34 -0.31
19 AT4G13360 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.82 0.33 -0.3
20 AT5G12890 UDP-Glycosyltransferase superfamily protein 0.82 0.32 -0.28
21 AT2G31200 actin depolymerizing factor 6 actin depolymerizing factor 6,
ATADF6		 0.82 0.33 -0.33
22 AT1G76390 ARM repeat superfamily protein plant U-box 43 0.82 0.3 -0.33
23 AT3G47810 Calcineurin-like metallo-phosphoesterase superfamily
protein		 ATVPS29, MAIGO 1, VACUOLAR PROTEIN
SORTING 29		 0.82 0.32 -0.3
24 AT4G17830 Peptidase M20/M25/M40 family protein 0.82 0.3 -0.31
25 AT2G39700 expansin A4 ATEXP4, expansin A4, ATHEXP ALPHA
1.6, expansin A4		 -0.82 0.31 -0.32
26 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 0.82 0.32 -0.31
27 AT5G59890 actin depolymerizing factor 4 actin depolymerizing factor 4,
ATADF4		 0.82 0.32 -0.32
28 AT4G35360 Uncharacterised conserved protein (UCP030210) 0.81 0.31 -0.31
29 AT3G21790 UDP-Glycosyltransferase superfamily protein 0.81 0.31 -0.29
30 AT5G55850 RPM1-interacting protein 4 (RIN4) family protein NOI 0.81 0.3 -0.32
31 AT1G65430 IBR domain-containing protein ARIADNE 8, ARABIDOPSIS ARIADNE 8 0.81 0.31 -0.32
32 AT3G16785 phospholipase D P1 PHOSPHOLIPASE D ZETA 1,
phospholipase D P1, PHOSPHOLIPASE
D ZETA1, PLDZETA1		 0.81 0.32 -0.32
33 AT5G56760 serine acetyltransferase 1;1 serine acetyltransferase 1;1,
SERINE ACETYLTRANSFERASE 52,
SERINE ACETYLTRANSFERASE 5, serine
acetyltransferase 1;1		 0.81 0.31 -0.3
34 AT5G48020 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.8 0.32 -0.34
35 AT3G02150 plastid transcription factor 1 plastid transcription factor 1,
TEOSINTE BRANCHED1, CYCLOIDEA AND
PCF TRANSCRIPTION FACTOR 13, TFPD		 0.8 0.33 -0.35
36 AT5G11680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, plasma
membrane; EXPRESSED IN: 26 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
WW-domain-binding protein (InterPro:IPR018826); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.8 0.31 -0.3
37 AT1G10500 chloroplast-localized ISCA-like protein chloroplast-localized ISCA-like
protein, chloroplast-localized
ISCA-like protein		 0.8 0.29 -0.32
38 AT5G43430 electron transfer flavoprotein beta electron transfer flavoprotein
beta		 0.8 0.31 -0.32
39 AT3G55110 ABC-2 type transporter family protein ATP-binding cassette G18 0.79 0.33 -0.3
40 AT1G29850 double-stranded DNA-binding family protein 0.79 0.32 -0.33
41 AT1G02170 metacaspase 1 ARABIDOPSIS THALIANA METACASPASE
1, metacaspase 1b, ARABIDOPSIS
THALIANA METACASPASE 1B, LSD ONE
LIKE 3, metacaspase 1, metacaspase
1b		 0.79 0.31 -0.31
42 AT5G42980 thioredoxin 3 thioredoxin H-type 3, thioredoxin
3, ATTRXH3, thioredoxin 3,
THIOREDOXIN H3		 0.79 0.3 -0.33
43 AT5G11960 Protein of unknown function (DUF803) 0.79 0.31 -0.3
44 AT1G17080 Ribosomal protein L18ae family 0.79 0.34 -0.32
45 AT5G16730 Plant protein of unknown function (DUF827) 0.79 0.3 -0.31
46 AT4G26760 microtubule-associated protein 65-2 microtubule-associated protein
65-2		 -0.78 0.33 -0.31
47 AT3G29350 histidine-containing phosphotransmitter 2 histidine-containing
phosphotransmitter 2		 0.78 0.3 -0.32
48 AT3G11780 MD-2-related lipid recognition domain-containing protein /
ML domain-containing protein		 0.78 0.31 -0.3
49 AT1G01820 peroxin 11c peroxin 11c 0.78 0.29 -0.31
50 AT5G08640 flavonol synthase 1 ATFLS1, FLAVONOL SYNTHASE,
flavonol synthase 1		 -0.78 0.31 -0.31
51 AT2G20920 Protein of unknown function (DUF3353) 0.78 0.31 -0.31
52 AT2G31350 glyoxalase 2-5 glyoxalase 2-5 0.78 0.32 -0.3
53 AT4G29490 Metallopeptidase M24 family protein 0.78 0.32 -0.31
54 AT5G11860 SCP1-like small phosphatase 5 SCP1-like small phosphatase 5 0.77 0.32 -0.33
55 AT2G34810 FAD-binding Berberine family protein 0.77 0.32 -0.3
56 AT2G40200 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.77 0.32 -0.32
57 AT4G36470 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.77 0.32 -0.32
58 AT5G43280 delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
DELTA(3,5),DELTA(2,4)-DIENOYL-COA
ISOMERASE 1		 0.77 0.32 -0.34
59 AT4G29080 phytochrome-associated protein 2 indole-3-acetic acid inducible 27,
phytochrome-associated protein 2		 -0.77 0.31 -0.3
60 AT1G53570 mitogen-activated protein kinase kinase kinase 3 mitogen-activated protein kinase
kinase kinase 3, MAP KINASE KINASE
KINASE 3		 0.77 0.35 -0.33
61 AT1G12140 flavin-monooxygenase glucosinolate S-oxygenase 5 flavin-monooxygenase glucosinolate
S-oxygenase 5		 0.77 0.31 -0.33
62 AT4G33090 aminopeptidase M1 aminopeptidase M1, AMINOPEPTIDASE
M1		 0.77 0.32 -0.3
63 AT5G17650 glycine/proline-rich protein 0.77 0.31 -0.3
64 AT1G75300 NmrA-like negative transcriptional regulator family protein 0.76 0.32 -0.3
65 AT1G12810 proline-rich family protein 0.76 0.3 -0.32
66 AT2G36570 Leucine-rich repeat protein kinase family protein -0.76 0.3 -0.32
67 AT1G01260 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.76 0.31 -0.33
68 AT1G65720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44
proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.76 0.31 -0.32
69 AT4G05160 AMP-dependent synthetase and ligase family protein 0.76 0.32 -0.31
70 AT5G56190 Transducin/WD40 repeat-like superfamily protein 0.76 0.3 -0.33
71 AT5G43940 GroES-like zinc-binding dehydrogenase family protein ALCOHOL DEHYDROGENASE 2, ATGSNOR1,
S-NITROSOGLUTATHIONE REDUCTASE,
sensitive to hot temperatures 5,
PARAQUAT RESISTANT 2		 0.76 0.32 -0.33
72 AT1G06420 unknown protein; Has 1017 Blast hits to 654 proteins in 124
species: Archae - 0; Bacteria - 39; Metazoa - 232; Fungi -
69; Plants - 40; Viruses - 0; Other Eukaryotes - 637
(source: NCBI BLink).		 -0.76 0.32 -0.33
73 AT1G03950 vacuolar protein sorting-associated protein 2.3 vacuolar protein
sorting-associated protein 2.3		 0.76 0.31 -0.29
74 AT5G48800 Phototropic-responsive NPH3 family protein -0.76 0.32 -0.34
75 AT2G42680 multiprotein bridging factor 1A ARABIDOPSIS THALIANA MULTIPROTEIN
BRIDGING FACTOR 1A, multiprotein
bridging factor 1A		 0.76 0.31 -0.32
76 AT3G06100 NOD26-like intrinsic protein 7;1 NOD26-like intrinsic protein 7;1,
NOD26-LIKE MIP 6, NOD26-LIKE MIP 8		 0.76 0.33 -0.31
77 AT3G61200 Thioesterase superfamily protein 0.76 0.32 -0.31
78 AT3G11660 NDR1/HIN1-like 1 NDR1/HIN1-like 1 0.76 0.32 -0.33
79 AT5G62710 Leucine-rich repeat protein kinase family protein -0.75 0.33 -0.31
80 AT5G63810 beta-galactosidase 10 beta-galactosidase 10 -0.75 0.3 -0.29
81 AT3G18630 uracil dna glycosylase uracil dna glycosylase, uracil dna
glycosylase		 -0.74 0.31 -0.33
82 AT5G65700 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 1 -0.74 0.32 -0.3
83 AT5G46700 Tetraspanin family protein TETRASPANIN 1, TORNADO 2 -0.74 0.32 -0.3
84 AT5G19530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ACAULIS 5 -0.74 0.32 -0.33
85 AT5G10800 RNA recognition motif (RRM)-containing protein -0.73 0.32 -0.32
86 AT2G38810 histone H2A 8 histone H2A 8 -0.73 0.31 -0.31
87 AT4G28100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
anchored to plasma membrane, anchored to membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G18050.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.73 0.31 -0.33
88 AT1G28110 serine carboxypeptidase-like 45 serine carboxypeptidase-like 45 -0.73 0.3 -0.33
89 AT1G54200 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits
to 581 proteins in 136 species: Archae - 0; Bacteria - 72;
Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other
Eukaryotes - 620 (source: NCBI BLink).		 -0.72 0.3 -0.32
90 AT3G20010 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 -0.71 0.33 -0.33
91 AT5G55250 IAA carboxylmethyltransferase 1 AtIAMT1, IAA
carboxylmethyltransferase 1		 -0.71 0.33 -0.3
92 AT1G52530 CONTAINS InterPro DOMAIN/s: Hus1-like protein
(InterPro:IPR007150); Has 129 Blast hits to 128 proteins in
49 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi -
10; Plants - 47; Viruses - 0; Other Eukaryotes - 15
(source: NCBI BLink).		 -0.71 0.32 -0.32
93 AT2G33310 auxin-induced protein 13 auxin-induced protein 13 -0.7 0.33 -0.33
94 AT2G27590 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.7 0.35 -0.33
95 AT5G20540 BREVIS RADIX-like 4 BREVIS RADIX-like 4, BRX-LIKE4,
BREVIS RADIX-like 4		 -0.7 0.3 -0.34
96 AT3G08030 Protein of unknown function, DUF642 -0.69 0.32 -0.33
97 AT2G26710 Cytochrome P450 superfamily protein PHYB ACTIVATION TAGGED SUPPRESSOR
1, CYP72B1, CYP734A1		 -0.69 0.33 -0.35
98 AT2G36730 Pentatricopeptide repeat (PPR) superfamily protein -0.69 0.3 -0.29
99 AT1G30510 root FNR 2 root FNR 2, root FNR 2 -0.68 0.31 -0.3
100 AT1G29660 GDSL-like Lipase/Acylhydrolase superfamily protein -0.68 0.31 -0.33
101 AT4G18910 NOD26-like intrinsic protein 1;2 NOD26-LIKE INTRINSIC PROTEIN 2,
NOD26-like intrinsic protein 1;2,
NOD26-LIKE INTRINSIC PROTEIN 2		 -0.68 0.29 -0.32
102 AT1G26330 DNA binding -0.67 0.32 -0.34
103 AT1G64405 unknown protein; Has 13 Blast hits to 13 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.33 -0.31
104 AT5G01700 Protein phosphatase 2C family protein -0.67 0.33 -0.3
105 AT3G27400 Pectin lyase-like superfamily protein -0.66 0.31 -0.31
106 AT5G54670 kinesin 3 kinesin 3, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA C		 -0.66 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
107 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		0.89 0.46 -0.42 C0220
108 C0237 Sinapyl alcohol - Sinapyl-alcohol monolignol glucosides biosynthesis,
phenylpropanoid biosynthesis 		0.87 0.44 -0.44 C0237
109 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		0.79 0.46 -0.45 C0120