AGICode | AT5G03590 |
Description | GDSL-like Lipase/Acylhydrolase superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G03590 | GDSL-like Lipase/Acylhydrolase superfamily protein | 1 | 0.31 | -0.31 | |||
2 | AT5G40750 | FBD / Leucine Rich Repeat domains containing protein | -0.63 | 0.31 | -0.31 | |||
3 | AT2G14570 | transposable element gene | -0.61 | 0.32 | -0.32 | |||
4 | AT3G28520 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.59 | 0.3 | -0.29 | |||
5 | AT1G35880 | unknown protein; Has 251 Blast hits to 234 proteins in 66 species: Archae - 2; Bacteria - 48; Metazoa - 87; Fungi - 9; Plants - 70; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). |
0.58 | 0.3 | -0.32 | |||
6 | AT5G59030 | copper transporter 1 | copper transporter 1 | 0.58 | 0.34 | -0.31 | ||
7 | AT1G12470 | zinc ion binding | -0.57 | 0.32 | -0.32 | |||
8 | AT2G14380 | transposable element gene | 0.57 | 0.3 | -0.32 | |||
9 | AT1G10880 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
0.57 | 0.32 | -0.33 | |||
10 | AT5G66640 | DA1-related protein 3 | DA1-related protein 3 | 0.57 | 0.31 | -0.32 | ||
11 | AT5G45260 | Disease resistance protein (TIR-NBS-LRR class) | ARABIDOPSIS THALIANA WRKY DOMAIN PROTEIN 52, RESISTANT TO RALSTONIA SOLANACEARUM 1, SENSITIVE TO LOW HUMIDITY 1 |
-0.56 | 0.32 | -0.35 | ||
12 | AT5G28860 | transposable element gene | 0.56 | 0.32 | -0.3 | |||
13 | AT2G40790 | C-terminal cysteine residue is changed to a serine 2 | C-terminal cysteine residue is changed to a serine 2, C-terminal cysteine residue is changed to a serine 2 |
0.55 | 0.32 | -0.3 | ||
14 | AT3G32090 | WRKY family transcription factor | 0.55 | 0.31 | -0.32 | |||
15 | AT5G57840 | HXXXD-type acyl-transferase family protein | -0.55 | 0.32 | -0.32 | |||
16 | AT1G08250 | arogenate dehydratase 6 | arogenate dehydratase 6, Arabidopsis thaliana arogenate dehydratase 6 |
-0.55 | 0.34 | -0.31 | ||
17 | AT2G22950 | Cation transporter/ E1-E2 ATPase family protein | auto-regulated Ca2+-ATPase 7 | 0.55 | 0.29 | -0.29 | ||
18 | AT3G57210 | Protein of unknown function (DUF626) | 0.54 | 0.3 | -0.31 | |||
19 | AT3G50160 | Plant protein of unknown function (DUF247) | -0.54 | 0.33 | -0.31 | |||
20 | AT2G26950 | myb domain protein 104 | myb domain protein 104, myb domain protein 104 |
0.54 | 0.33 | -0.3 | ||
21 | AT1G49840 | Protein of unknown function (DUF620) | 0.54 | 0.33 | -0.35 | |||
22 | AT3G59260 | pirin, putative | 0.53 | 0.31 | -0.32 | |||
23 | AT5G40250 | RING/U-box superfamily protein | 0.53 | 0.33 | -0.31 | |||
24 | AT4G19500 | nucleoside-triphosphatases;transmembrane receptors;nucleotide binding;ATP binding |
-0.52 | 0.32 | -0.33 | |||
25 | AT5G44150 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
-0.52 | 0.3 | -0.32 | |||
26 | AT2G44430 | DNA-binding bromodomain-containing protein | -0.52 | 0.32 | -0.32 | |||
27 | AT5G43410 | Integrase-type DNA-binding superfamily protein | -0.52 | 0.3 | -0.3 | |||
28 | AT3G43950 | Protein kinase superfamily protein | 0.52 | 0.33 | -0.29 | |||
29 | AT2G23470 | Protein of unknown function, DUF647 | ROOT UV-B SENSITIVE 4 | 0.52 | 0.3 | -0.3 | ||
30 | AT1G13130 | Cellulase (glycosyl hydrolase family 5) protein | 0.52 | 0.31 | -0.33 | |||
31 | AT4G28460 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 8 Blast hits to 8 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.52 | 0.32 | -0.33 | |||
32 | AT5G44700 | Leucine-rich repeat transmembrane protein kinase | EMBRYO SAC DEVELOPMENT ARREST 23, GASSHO 2 |
0.5 | 0.33 | -0.32 | ||
33 | AT1G43715 | transposable element gene | 0.5 | 0.32 | -0.32 | |||
34 | AT4G11870 | unknown protein; Has 98 Blast hits to 93 proteins in 36 species: Archae - 2; Bacteria - 26; Metazoa - 15; Fungi - 20; Plants - 2; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). |
0.5 | 0.32 | -0.31 | |||
35 | AT3G31380 | transposable element gene | -0.49 | 0.3 | -0.31 | |||
36 | AT1G04540 | Calcium-dependent lipid-binding (CaLB domain) family protein |
0.49 | 0.29 | -0.31 | |||
37 | AT5G38040 | UDP-Glycosyltransferase superfamily protein | -0.49 | 0.34 | -0.32 | |||
38 | AT5G26040 | histone deacetylase 2 | histone deacetylase 2 | 0.49 | 0.32 | -0.35 | ||
39 | AT4G03870 | transposable element gene | 0.48 | 0.31 | -0.32 | |||
40 | AT5G53150 | DNAJ heat shock N-terminal domain-containing protein | -0.48 | 0.33 | -0.31 | |||
41 | AT3G06260 | galacturonosyltransferase-like 4 | galacturonosyltransferase-like 4, galactinol synthase 9 |
-0.48 | 0.31 | -0.32 | ||
42 | ATMG00890 | hypothetical protein | ORF106D | -0.47 | 0.32 | -0.32 | ||
43 | AT5G45260 | Disease resistance protein (TIR-NBS-LRR class) | ARABIDOPSIS THALIANA WRKY DOMAIN PROTEIN 52, RESISTANT TO RALSTONIA SOLANACEARUM 1, SENSITIVE TO LOW HUMIDITY 1 |
-0.47 | 0.32 | -0.31 | ||
44 | AT3G31910 | Domain of unknown function (DUF1985) | -0.47 | 0.33 | -0.32 | |||
45 | AT5G56110 | myb domain protein 103 | myb domain protein 103, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 80, MALE STERILE 188, myb domain protein 103, MYB80 |
-0.46 | 0.32 | -0.32 | ||
46 | AT2G34820 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.45 | 0.33 | -0.31 | |||
47 | AT5G03620 | Subtilisin-like serine endopeptidase family protein | 0.45 | 0.3 | -0.3 | |||
48 | AT1G32660 | F-box and associated interaction domains-containing protein | 0.45 | 0.31 | -0.32 | |||
49 | AT1G73050 | Glucose-methanol-choline (GMC) oxidoreductase family protein |
-0.45 | 0.31 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
50 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
-0.73 | 0.43 | -0.43 | ||
51 | C0030 | 3-Methylsulfinyl-n-propylglucosinolate | - | 3-Methylsulfinylpropyl-glucosinolate | glucosinolate biosynthesis from homomethionine | -0.73 | 0.45 | -0.46 | ||
52 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | -0.7 | 0.43 | -0.45 | ||
53 | C0075 | dGDP | - | dGDP | purine nucleotide metabolism (phosphotransfer and nucleotide modification) | -0.68 | 0.46 | -0.42 | ||
54 | C0094 | Galactosamine | D-Galactosamine | - | - | -0.64 | 0.44 | -0.45 | ||
55 | C0073 | Cysteine | L-Cysteine | L-Cysteine | alanine biosynthesis III, cysteine biosynthesis I, gamma-glutamyl cycle (plant pathway), farnesylcysteine salvage pathway, molybdenum cofactor biosynthesis, thiamine biosynthesis II, cyanide detoxification II, indole glucosinolate breakdown (insect chewing induced), glutathione degradation, glutathione biosynthesis, molybdenum cofactor biosynthesis II (eukaryotes), cyanide degradation, homocysteine and cysteine interconversion, methionine biosynthesis II, tRNA charging, gamma-glutamyl cycle, coenzyme A biosynthesis |
-0.63 | 0.45 | -0.43 | ||
56 | C0149 | Mevalonolactone | D,L-Mevalonolactone | - | terpenoid biosynthesis | -0.63 | 0.44 | -0.45 | ||
57 | C0088 | FAD | - | FAD | cytokinins degradation, lysine degradation II, valine degradation I, isoleucine degradation I, flavin biosynthesis I (bacteria and plants) |
-0.61 | 0.44 | -0.45 | ||
58 | C0262 | UDP-glucuronic acid | - | UDP-D-glucuronate | xylan biosynthesis, UDP-D-glucuronate biosynthesis (from myo-inositol), UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate), UDP-D-apiose biosynthesis (from UDP-D-glucuronate), galactose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis |
-0.6 | 0.45 | -0.44 | ||
59 | C0261 | UDP-glucose | - | UDP-D-glucose | quercetin glucoside biosynthesis (Arabidopsis), abscisic acid glucose ester biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), UDP-glucose biosynthesis (from sucrose), 2,4,6-trinitrotoluene degradation, galactose degradation I (Leloir pathway), cytokinins-O-glucoside biosynthesis, trehalose biosynthesis I, dolichyl-diphosphooligosaccharide biosynthesis, phenolic malonylglucosides biosynthesis, callose biosynthesis, superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside), glucosinolate biosynthesis from hexahomomethionine, coniferin metabolism, glucosinolate biosynthesis from phenylalanine, xyloglucan biosynthesis, glucosinolate biosynthesis from pentahomomethionine, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), glucosinolate biosynthesis from dihomomethionine, cellulose biosynthesis, sinapate ester biosynthesis, superpathway of IAA conjugate biosynthesis, salicylate glucosides biosynthesis IV, sucrose biosynthesis I, glucosinolate biosynthesis from trihomomethionine, tetrahydrofolate biosynthesis II, sucrose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis, coumarin biosynthesis (via 2-coumarate), superpathway of sucrose and starch metabolism I (non-photosynthetic tissue), monolignol glucosides biosynthesis, glucosinolate biosynthesis from homomethionine, kaempferol glucoside biosynthesis (Arabidopsis), salicylate glucosides biosynthesis III, cytokinins 7-N-glucoside biosynthesis, galactose degradation III, cytokinins 9-N-glucoside biosynthesis, glucosinolate biosynthesis from tryptophan, UDP-galactose biosynthesis, salicylate glucosides biosynthesis II, stachyose degradation, superpathway of sucrose and starch metabolism II (photosynthetic tissue), UDP-glucose biosynthesis (from glucose 6-phosphate), sphingolipid biosynthesis (plants), glucosinolate biosynthesis from tetrahomomethionine, galactose degradation II, UDP-L-rhamnose biosynthesis |
-0.6 | 0.45 | -0.46 |