AGICode | AT5G03455 |
Description | Rhodanese/Cell cycle control phosphatase superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G03455 | Rhodanese/Cell cycle control phosphatase superfamily protein |
ARSENATE REDUCTASE 2, ARATH;CDC25, CDC25 |
1 | 0.3 | -0.33 | ||
2 | AT1G04440 | casein kinase like 13 | casein kinase like 13 | 0.76 | 0.32 | -0.33 | ||
3 | AT3G13570 | SC35-like splicing factor 30A | SC35-like splicing factor 30A, SC35-like splicing factor 30A |
-0.76 | 0.31 | -0.32 | ||
4 | AT1G31820 | Amino acid permease family protein | 0.76 | 0.31 | -0.33 | |||
5 | AT1G01490 | Heavy metal transport/detoxification superfamily protein | 0.76 | 0.31 | -0.31 | |||
6 | AT5G64200 | ortholog of human splicing factor SC35 | ortholog of human splicing factor SC35, ARABIDOPSIS THALIANA ORTHOLOG OF HUMAN SPLICING FACTOR SC35, ortholog of human splicing factor SC35 |
-0.75 | 0.29 | -0.31 | ||
7 | AT1G55850 | cellulose synthase like E1 | ATCSLE1, cellulose synthase like E1 |
0.75 | 0.32 | -0.31 | ||
8 | AT5G42850 | Thioredoxin superfamily protein | 0.74 | 0.32 | -0.33 | |||
9 | AT4G36400 | FAD-linked oxidases family protein | D-2-hydroxyglutarate dehydrogenase | 0.74 | 0.32 | -0.32 | ||
10 | AT2G46610 | RNA-binding (RRM/RBD/RNP motifs) family protein | arginine/serine-rich splicing factor 31a, arginine/serine-rich splicing factor 31a |
0.74 | 0.32 | -0.3 | ||
11 | AT4G29820 | homolog of CFIM-25 | ARABIDOPSIS THALIANA HOMOLOG OF CFIM-25, homolog of CFIM-25 |
0.73 | 0.32 | -0.31 | ||
12 | AT5G49650 | xylulose kinase-2 | xylulose kinase-2, XYLULOSE KINASE 2 |
0.73 | 0.32 | -0.28 | ||
13 | AT3G56950 | small and basic intrinsic protein 2;1 | SMALL AND BASIC INTRINSIC PROTEIN 2, small and basic intrinsic protein 2;1 |
0.73 | 0.31 | -0.31 | ||
14 | AT3G28050 | nodulin MtN21 /EamA-like transporter family protein | 0.73 | 0.31 | -0.32 | |||
15 | AT1G15660 | centromere protein C | CENP-C HOMOLOGUE, centromere protein C |
-0.72 | 0.3 | -0.32 | ||
16 | AT2G33630 | NAD(P)-binding Rossmann-fold superfamily protein | 0.72 | 0.31 | -0.36 | |||
17 | AT4G14615 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2346 (InterPro:IPR018625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52825.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.72 | 0.32 | -0.31 | |||
18 | AT1G04240 | AUX/IAA transcriptional regulator family protein | indole-3-acetic acid inducible 3, SHORT HYPOCOTYL 2 |
-0.72 | 0.32 | -0.32 | ||
19 | AT1G27980 | dihydrosphingosine phosphate lyase | ATDPL1, dihydrosphingosine phosphate lyase |
0.71 | 0.31 | -0.33 | ||
20 | AT5G29000 | Homeodomain-like superfamily protein | PHR1-like 1 | 0.7 | 0.31 | -0.33 | ||
21 | AT3G19515 | CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5 (InterPro:IPR008383); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23935.1); Has 546 Blast hits to 394 proteins in 84 species: Archae - 0; Bacteria - 3; Metazoa - 210; Fungi - 15; Plants - 143; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink). |
-0.7 | 0.32 | -0.33 | |||
22 | AT5G04590 | sulfite reductase | sulfite reductase | 0.7 | 0.32 | -0.31 | ||
23 | AT2G35795 | Chaperone DnaJ-domain superfamily protein | 0.69 | 0.31 | -0.29 | |||
24 | AT3G03470 | cytochrome P450, family 87, subfamily A, polypeptide 9 | cytochrome P450, family 87, subfamily A, polypeptide 9 |
0.69 | 0.33 | -0.32 | ||
25 | AT5G25770 | alpha/beta-Hydrolases superfamily protein | 0.69 | 0.32 | -0.31 | |||
26 | AT5G12200 | pyrimidine 2 | pyrimidine 2 | 0.68 | 0.31 | -0.33 | ||
27 | AT3G16230 | Predicted eukaryotic LigT | 0.68 | 0.32 | -0.31 | |||
28 | AT1G80230 | Rubredoxin-like superfamily protein | 0.68 | 0.31 | -0.33 | |||
29 | AT3G06650 | ATP-citrate lyase B-1 | ATP-citrate lyase B-1 | -0.68 | 0.3 | -0.32 | ||
30 | AT4G36860 | LIM domain-containing protein | DA1-RELATED PROTEIN 1 | 0.68 | 0.28 | -0.32 | ||
31 | AT4G35220 | Cyclase family protein | 0.67 | 0.31 | -0.33 | |||
32 | AT3G55005 | tonneau 1b (TON1b) | tonneau 1b | -0.67 | 0.31 | -0.32 | ||
33 | AT5G54250 | cyclic nucleotide-gated cation channel 4 | cyclic nucleotide-gated cation channel 4, cyclic nucleotide-gated cation channel 4, DEFENSE, NO DEATH 2, HLM1 |
0.67 | 0.32 | -0.31 | ||
34 | AT5G26600 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
0.67 | 0.3 | -0.3 | |||
35 | AT2G43980 | inositol 1,3,4-trisphosphate 5/6-kinase 4 | inositol 1,3,4-trisphosphate 5/6-kinase 4, inositol 1,3,4-trisphosphate 5/6-kinase 4 |
0.67 | 0.31 | -0.32 | ||
36 | AT5G53550 | YELLOW STRIPE like 3 | YELLOW STRIPE LIKE 3, YELLOW STRIPE like 3 |
0.67 | 0.3 | -0.33 | ||
37 | AT5G55480 | SHV3-like 1 | Glycerophosphodiester phosphodiesterase (GDPD) like 4, glycerophosphodiesterase-like 1, SHV3-like 1 |
-0.67 | 0.31 | -0.32 | ||
38 | AT1G03030 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.67 | 0.33 | -0.3 | |||
39 | AT3G23740 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14120.1); Has 155 Blast hits to 130 proteins in 48 species: Archae - 0; Bacteria - 16; Metazoa - 19; Fungi - 48; Plants - 47; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). |
-0.66 | 0.32 | -0.32 | |||
40 | AT2G26730 | Leucine-rich repeat protein kinase family protein | -0.66 | 0.35 | -0.31 | |||
41 | AT1G73820 | Ssu72-like family protein | 0.66 | 0.37 | -0.31 | |||
42 | AT5G04850 | SNF7 family protein | VPS60.2 | 0.66 | 0.32 | -0.33 | ||
43 | AT3G18850 | lysophosphatidyl acyltransferase 5 | lysophosphatidyl acyltransferase 5 | -0.66 | 0.31 | -0.31 | ||
44 | AT5G47560 | tonoplast dicarboxylate transporter | ATSDAT, TONOPLAST DICARBOXYLATE TRANSPORTER, tonoplast dicarboxylate transporter |
0.65 | 0.31 | -0.31 | ||
45 | AT4G02010 | Protein kinase superfamily protein | -0.65 | 0.33 | -0.31 | |||
46 | AT5G58490 | NAD(P)-binding Rossmann-fold superfamily protein | 0.65 | 0.33 | -0.3 | |||
47 | AT1G07360 | CCCH-type zinc fingerfamily protein with RNA-binding domain | MOS4-associated complex subunit 5A | -0.65 | 0.32 | -0.34 | ||
48 | AT5G53360 | TRAF-like superfamily protein | 0.65 | 0.3 | -0.3 | |||
49 | AT2G43420 | 3-beta hydroxysteroid dehydrogenase/isomerase family protein |
0.65 | 0.31 | -0.32 | |||
50 | AT2G32520 | alpha/beta-Hydrolases superfamily protein | 0.64 | 0.34 | -0.31 | |||
51 | AT2G36360 | Galactose oxidase/kelch repeat superfamily protein | 0.64 | 0.31 | -0.32 | |||
52 | AT3G11490 | rac GTPase activating protein | -0.64 | 0.31 | -0.3 | |||
53 | AT3G53390 | Transducin/WD40 repeat-like superfamily protein | 0.64 | 0.3 | -0.3 | |||
54 | AT1G52880 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
Arabidopsis NAC domain containing protein 18, ATNAM, NO APICAL MERISTEM, NAC-REGULATED SEED MORPHOLOGY 2 |
0.64 | 0.3 | -0.31 | ||
55 | AT3G27200 | Cupredoxin superfamily protein | -0.64 | 0.33 | -0.31 | |||
56 | AT1G02475 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
0.64 | 0.31 | -0.32 | |||
57 | AT3G15770 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 143 Blast hits to 143 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
0.64 | 0.31 | -0.33 | |||
58 | AT5G56740 | histone acetyltransferase of the GNAT family 2 | HAC07, HAC7, HAG02, histone acetyltransferase of the GNAT family 2 |
-0.64 | 0.3 | -0.29 | ||
59 | AT1G28580 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.64 | 0.31 | -0.33 | |||
60 | AT4G26540 | Leucine-rich repeat receptor-like protein kinase family protein |
-0.64 | 0.3 | -0.31 | |||
61 | AT5G44280 | RING 1A | ARABIDOPSIS THALIANA RING 1A, RING 1A |
-0.63 | 0.3 | -0.31 | ||
62 | AT4G31360 | selenium binding | -0.63 | 0.3 | -0.29 | |||
63 | AT3G57130 | Ankyrin repeat family protein / BTB/POZ domain-containing protein |
BLADE ON PETIOLE 1 | -0.63 | 0.3 | -0.31 | ||
64 | AT3G17830 | Molecular chaperone Hsp40/DnaJ family protein | -0.63 | 0.33 | -0.32 | |||
65 | AT5G62030 | diphthamide synthesis DPH2 family protein | -0.63 | 0.34 | -0.31 | |||
66 | AT2G17560 | high mobility group B4 | high mobility group B4, NFD04, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR D4 |
-0.63 | 0.3 | -0.31 | ||
67 | AT5G12850 | CCCH-type zinc finger protein with ARM repeat domain | -0.63 | 0.32 | -0.3 | |||
68 | AT2G22490 | Cyclin D2;1 | ATCYCD2;1, Cyclin D2;1 | 0.63 | 0.32 | -0.32 | ||
69 | AT2G20280 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.63 | 0.3 | -0.33 | |||
70 | AT4G01510 | Arv1-like protein | ARV2 | 0.63 | 0.32 | -0.31 | ||
71 | AT1G64960 | ARM repeat superfamily protein | hypersensitive to excess boron 1 | -0.63 | 0.34 | -0.32 | ||
72 | AT1G54080 | oligouridylate-binding protein 1A | oligouridylate-binding protein 1A | 0.63 | 0.32 | -0.32 | ||
73 | AT2G04940 | scramblase-related | 0.63 | 0.33 | -0.34 | |||
74 | AT5G52920 | plastidic pyruvate kinase beta subunit 1 | plastidic pyruvate kinase beta subunit 1, PLASTIDIAL PYRUVATE KINASE 1, PLASTIDIAL PYRUVATE KINASE 2 |
-0.62 | 0.32 | -0.32 | ||
75 | AT2G33480 | NAC domain containing protein 41 | NAC domain containing protein 41, NAC domain containing protein 41 |
0.62 | 0.31 | -0.32 | ||
76 | AT3G01360 | Family of unknown function (DUF716) | 0.62 | 0.31 | -0.3 | |||
77 | AT5G63380 | AMP-dependent synthetase and ligase family protein | -0.62 | 0.3 | -0.31 | |||
78 | AT3G17330 | evolutionarily conserved C-terminal region 6 | evolutionarily conserved C-terminal region 6 |
-0.62 | 0.32 | -0.33 | ||
79 | AT3G06450 | HCO3- transporter family | 0.62 | 0.31 | -0.32 | |||
80 | AT5G65120 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.62 | 0.33 | -0.32 | |||
81 | AT1G07790 | Histone superfamily protein | HTB1 | -0.62 | 0.32 | -0.3 | ||
82 | AT4G17160 | RAB GTPase homolog B1A | ATRAB2B, RAB GTPase homolog B1A, RAB GTPase homolog B1A |
-0.62 | 0.29 | -0.32 | ||
83 | AT3G23820 | UDP-D-glucuronate 4-epimerase 6 | UDP-D-glucuronate 4-epimerase 6 | -0.62 | 0.31 | -0.29 | ||
84 | AT5G38780 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.62 | 0.31 | -0.32 | |||
85 | AT5G26230 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
membrane-associated kinase regulator 1 |
-0.62 | 0.34 | -0.33 | ||
86 | AT5G53030 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.61 | 0.31 | -0.32 | |||
87 | AT1G05710 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.61 | 0.32 | -0.32 | |||
88 | AT4G21610 | lsd one like 2 | lsd one like 2 | 0.61 | 0.32 | -0.31 | ||
89 | AT3G63300 | FORKED 1 | FORKED 1 | -0.61 | 0.32 | -0.32 | ||
90 | AT4G38800 | methylthioadenosine nucleosidase 1 | ARABIDOPSIS METHYLTHIOADENOSINE NUCLEOSIDASE 1, ARABIDOPSIS METHYLTHIOADENOSINE NUCLEOSIDASE 1, METHYLTHIOADENOSINE NUCLEOSIDASE 1, methylthioadenosine nucleosidase 1 |
0.61 | 0.31 | -0.32 | ||
91 | AT5G45370 | nodulin MtN21 /EamA-like transporter family protein | 0.61 | 0.31 | -0.32 | |||
92 | AT1G16730 | unknown protein 6 | unknown protein 6 | 0.61 | 0.32 | -0.33 | ||
93 | AT1G44780 | CONTAINS InterPro DOMAIN/s: Histone chaperone domain CHZ (InterPro:IPR019098); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08310.1); Has 18105 Blast hits to 11200 proteins in 808 species: Archae - 37; Bacteria - 1195; Metazoa - 7724; Fungi - 1727; Plants - 674; Viruses - 183; Other Eukaryotes - 6565 (source: NCBI BLink). |
-0.6 | 0.33 | -0.32 | |||
94 | AT2G36400 | growth-regulating factor 3 | growth-regulating factor 3, growth-regulating factor 3 |
-0.6 | 0.32 | -0.32 | ||
95 | AT4G12640 | RNA recognition motif (RRM)-containing protein | -0.6 | 0.33 | -0.32 | |||
96 | AT4G31140 | O-Glycosyl hydrolases family 17 protein | -0.6 | 0.31 | -0.31 | |||
97 | AT4G16515 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 6 | -0.6 | 0.33 | -0.33 | ||
98 | AT2G33570 | Domain of unknown function (DUF23) | -0.6 | 0.3 | -0.33 | |||
99 | AT3G18160 | peroxin 3-1 | peroxin 3-1 | -0.6 | 0.32 | -0.3 | ||
100 | AT1G74390 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.6 | 0.31 | -0.32 | |||
101 | AT5G62350 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
-0.59 | 0.32 | -0.31 | |||
102 | AT2G20240 | Protein of unknown function (DUF3741) | -0.59 | 0.29 | -0.32 | |||
103 | AT1G48120 | hydrolases;protein serine/threonine phosphatases | -0.59 | 0.32 | -0.31 | |||
104 | AT3G19340 | Protein of unknown function (DUF3754) | -0.59 | 0.32 | -0.32 | |||
105 | AT1G78440 | Arabidopsis thaliana gibberellin 2-oxidase 1 | Arabidopsis thaliana gibberellin 2-oxidase 1, gibberellin 2-oxidase 1 |
-0.59 | 0.3 | -0.32 | ||
106 | AT5G40390 | Raffinose synthase family protein | raffinose synthase 5, seed imbibition 1-like |
-0.59 | 0.32 | -0.3 | ||
107 | AT4G19191 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.59 | 0.33 | -0.32 | |||
108 | AT1G18330 | Homeodomain-like superfamily protein | EARLY-PHYTOCHROME-RESPONSIVE1, REVEILLE 7 |
-0.59 | 0.3 | -0.29 | ||
109 | AT1G55690 | Sec14p-like phosphatidylinositol transfer family protein | -0.58 | 0.31 | -0.33 | |||
110 | AT4G33390 | Plant protein of unknown function (DUF827) | -0.58 | 0.31 | -0.33 | |||
111 | AT5G11530 | embryonic flower 1 (EMF1) | embryonic flower 1 | -0.58 | 0.34 | -0.33 | ||
112 | AT1G16330 | cyclin b3;1 | cyclin b3;1 | -0.58 | 0.31 | -0.31 | ||
113 | AT3G55060 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39300.2); Has 61765 Blast hits to 33720 proteins in 2065 species: Archae - 846; Bacteria - 6964; Metazoa - 31967; Fungi - 5247; Plants - 3104; Viruses - 205; Other Eukaryotes - 13432 (source: NCBI BLink). |
-0.58 | 0.32 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
114 | C0252 | Threonic acid | D,L-Threonic acid | L-Threonate | ascorbic acid degradation | -0.81 | 0.48 | -0.48 | ||
115 | C0093 | Galactinol dihydrate | - | Galactinol | galactosylcyclitol biosynthesis, stachyose biosynthesis, ajugose biosynthesis I (galactinol-dependent) |
-0.75 | 0.45 | -0.45 | ||
116 | C0173 | MST_2301.7 | - | - | - | -0.72 | 0.46 | -0.47 | ||
117 | C0248 | Sulfoquinovosyldiacylglycerol-36:3 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | -0.71 | 0.49 | -0.5 | ||
118 | C0251 | Sulfoquinovosyldiacylglycerol-36:6 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | -0.7 | 0.49 | -0.49 | ||
119 | C0250 | Sulfoquinovosyldiacylglycerol-36:5 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | -0.66 | 0.35 | -0.34 | ||
120 | C0249 | Sulfoquinovosyldiacylglycerol-36:4 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | -0.61 | 0.34 | -0.33 | ||
121 | C0206 | Phosphatidylglycerol-34:4 | - | Phosphatidylglycerol-34:4 | cardiolipin biosynthesis II, linoleate biosynthesis I, glycerophosphodiester degradation, glutathione redox reactions I |
-0.6 | 0.34 | -0.33 | ||
122 | C0245 | Sulfoquinovosyldiacylglycerol-34:1 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | -0.59 | 0.32 | -0.34 | ||
123 | C0246 | Sulfoquinovosyldiacylglycerol-34:2 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | -0.59 | 0.34 | -0.36 |