AT5G03200 : -
Query Information
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AGICode AT5G03200
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G03200 RING/U-box superfamily protein 1 0.35 -0.3
2 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family 0.77 0.3 -0.31
3 AT1G59900 pyruvate dehydrogenase complex E1 alpha subunit pyruvate dehydrogenase complex E1
alpha subunit, pyruvate
dehydrogenase complex E1 alpha
subunit		 0.77 0.3 -0.3
4 AT5G35730 EXS (ERD1/XPR1/SYG1) family protein 0.77 0.33 -0.34
5 AT1G77080 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 27, FLOWERING LOCUS
M, MADS AFFECTING FLOWERING 1		 0.74 0.31 -0.33
6 AT4G27050 F-box/RNI-like superfamily protein -0.73 0.3 -0.3
7 AT5G17890 DA1-related protein 4 CHILLING SENSITIVE 3, DA1-related
protein 4		 0.72 0.33 -0.28
8 AT3G53710 ARF-GAP domain 6 ARF-GAP domain 6 0.72 0.32 -0.31
9 AT1G27590 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana
protein match is: phosphatidylinositol 3- and 4-kinase
family protein (TAIR:AT1G27570.1); Has 109 Blast hits to
109 proteins in 38 species: Archae - 0; Bacteria - 0;
Metazoa - 65; Fungi - 4; Plants - 38; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.72 0.32 -0.31
10 AT1G65280 DNAJ heat shock N-terminal domain-containing protein 0.71 0.3 -0.35
11 AT5G39950 thioredoxin 2 Arabidopsis thioredoxin h2,
thioredoxin 2, ATTRXH2,
thioredoxin 2, THIOREDOXIN H2		 0.7 0.32 -0.3
12 AT1G68370 Chaperone DnaJ-domain superfamily protein ALTERED RESPONSE TO GRAVITY 1 0.7 0.3 -0.32
13 AT5G23230 nicotinamidase 2 nicotinamidase 2 0.7 0.32 -0.33
14 AT1G67550 urease urease 0.7 0.32 -0.32
15 AT4G13630 Protein of unknown function, DUF593 0.69 0.3 -0.33
16 AT1G63900 E3 Ubiquitin ligase family protein DIAP1-like protein 1 0.69 0.31 -0.31
17 AT4G13050 Acyl-ACP thioesterase 0.69 0.33 -0.34
18 AT1G62830 LSD1-like 1 ARABIDOPSIS LYSINE-SPECIFIC
HISTONE DEMETHYLASE, ATSWP1,
LSD1-like 1, LYSINE-SPECIFIC
HISTONE DEMETHYLASE, SWP1		 0.68 0.32 -0.34
19 AT1G65290 mitochondrial acyl carrier protein 2 mitochondrial acyl carrier protein
2		 0.68 0.3 -0.31
20 AT4G13460 SU(VAR)3-9 homolog 9 SETDOMAIN GROUP 22, SET22,
SU(VAR)3-9 homolog 9		 0.68 0.34 -0.3
21 AT1G52760 lysophospholipase 2 lysophospholipase 2 0.68 0.34 -0.31
22 AT4G32960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits
to 106 proteins in 39 species: Archae - 0; Bacteria - 0;
Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.68 0.32 -0.31
23 AT1G51440 alpha/beta-Hydrolases superfamily protein 0.68 0.33 -0.3
24 AT5G42280 Cysteine/Histidine-rich C1 domain family protein 0.67 0.33 -0.33
25 AT3G06433 pseudogene of nodulin MtN3 family protein 0.67 0.32 -0.31
26 AT5G05750 DNAJ heat shock N-terminal domain-containing protein 0.67 0.34 -0.29
27 AT4G25100 Fe superoxide dismutase 1 ARABIDOPSIS FE SUPEROXIDE
DISMUTASE 1, Fe superoxide
dismutase 1		 0.67 0.33 -0.33
28 AT1G66540 Cytochrome P450 superfamily protein 0.67 0.33 -0.31
29 AT1G51430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G28370.1); Has 13 Blast hits
to 13 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.29 -0.3
30 AT4G09680 conserved telomere maintenance component 1 ATCTC1, conserved telomere
maintenance component 1		 0.66 0.3 -0.32
31 AT4G12460 OSBP(oxysterol binding protein)-related protein 2B OSBP(oxysterol binding
protein)-related protein 2B		 0.66 0.32 -0.33
32 AT5G37830 oxoprolinase 1 oxoprolinase 1 0.65 0.3 -0.32
33 AT5G35450 Disease resistance protein (CC-NBS-LRR class) family 0.64 0.33 -0.3
34 AT1G69550 disease resistance protein (TIR-NBS-LRR class) 0.64 0.34 -0.3
35 AT3G07610 Transcription factor jumonji (jmjC) domain-containing
protein		 increase in bonsai methylation 1 0.64 0.32 -0.3
36 AT4G29050 Concanavalin A-like lectin protein kinase family protein 0.63 0.32 -0.31
37 AT5G15980 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.31 -0.31
38 AT1G77080 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 27, FLOWERING LOCUS
M, MADS AFFECTING FLOWERING 1		 0.63 0.32 -0.33
39 AT5G25060 RNA recognition motif (RRM)-containing protein 0.63 0.32 -0.32
40 AT1G60710 NAD(P)-linked oxidoreductase superfamily protein ATB2 0.62 0.32 -0.3
41 AT1G61730 DNA-binding storekeeper protein-related transcriptional
regulator		 0.62 0.32 -0.31
42 AT5G39990 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.62 0.32 -0.32
43 AT5G54650 formin homology5 FORMIN HOMOLOGY 5, formin
homology5		 0.62 0.32 -0.32
44 AT1G79000 histone acetyltransferase of the CBP family 1 ARABIDOPSIS HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 1, ARABIDOPSIS THALIANA
P300/CBP ACETYLTRANSFERASE-RELATED
PROTEIN 2, histone
acetyltransferase of the CBP
family 1, P300/CBP
ACETYLTRANSFERASE-RELATED PROTEIN
2		 0.62 0.32 -0.3
45 AT5G16640 Pentatricopeptide repeat (PPR) superfamily protein 0.61 0.29 -0.31
46 AT1G50290 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.32 -0.3
47 AT5G53130 cyclic nucleotide gated channel 1 CYCLIC NUCLEOTIDE-GATED CHANNEL 1,
cyclic nucleotide gated channel 1		 0.61 0.31 -0.3
48 AT5G01810 CBL-interacting protein kinase 15 PROTEIN KINASE 10, CBL-interacting
protein kinase 15, PKS3,
SOS3-INTERACTING PROTEIN 2,
SNF1-RELATED PROTEIN KINASE 3.1		 0.61 0.32 -0.32
49 AT4G19240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43280.1); Has 19 Blast hits
to 17 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.3 -0.3
50 AT5G38210 Protein kinase family protein 0.6 0.33 -0.31
51 AT5G23710 DNA binding;DNA-directed RNA polymerases 0.6 0.28 -0.31
52 AT4G12840 Protein of unknown function (DUF707) 0.6 0.3 -0.32
53 AT1G65370 TRAF-like family protein 0.6 0.32 -0.33
54 AT3G53260 phenylalanine ammonia-lyase 2 ATPAL2, phenylalanine
ammonia-lyase 2		 0.59 0.32 -0.34
55 AT1G63050 MBOAT (membrane bound O-acyl transferase) family protein -0.59 0.32 -0.31
56 AT1G74320 Protein kinase superfamily protein 0.59 0.3 -0.3
57 AT5G10140 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 25, FLC, FLOWERING
LOCUS C, FLOWERING LOCUS F		 0.59 0.3 -0.31
58 AT5G02100 Oxysterol-binding family protein OSBP(OXYSTEROL BINDING
PROTEIN)-RELATED PROTEIN 3A,
UNFERTILIZED EMBRYO SAC 18		 0.59 0.32 -0.34
59 AT1G64270 transposable element gene 0.59 0.33 -0.31
60 AT1G54120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14060.1); Has 23 Blast hits
to 23 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.29 -0.32
61 AT5G28040 DNA-binding storekeeper protein-related transcriptional
regulator		 0.59 0.31 -0.32
62 AT1G64490 DEK, chromatin associated protein 0.59 0.33 -0.31
63 AT5G28290 NIMA-related kinase 3 NIMA-related kinase 3,
NIMA-related kinase 3		 0.58 0.3 -0.33
64 AT1G58270 TRAF-like family protein ZW9 0.58 0.3 -0.34
65 AT5G05890 UDP-Glycosyltransferase superfamily protein 0.58 0.31 -0.32
66 AT5G27110 Tetratricopeptide repeat (TPR)-like superfamily protein 0.58 0.33 -0.29
67 AT1G62850 Class I peptide chain release factor 0.58 0.32 -0.3
68 AT5G05760 syntaxin of plants 31 ATSED5, ATSYP31, T-SNARE SED 5,
syntaxin of plants 31		 0.58 0.34 -0.34
69 AT5G28490 Protein of unknown function (DUF640) LIGHT-DEPENDENT SHORT HYPOCOTYLS
1, ORGAN BOUNDARY 2		 0.57 0.32 -0.32
70 AT4G31570 CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G24460.1); Has 194354 Blast hits to 66887 proteins
in 3244 species: Archae - 3688; Bacteria - 38556; Metazoa -
84828; Fungi - 17265; Plants - 10589; Viruses - 805; Other
Eukaryotes - 38623 (source: NCBI BLink).		 -0.57 0.32 -0.32
71 AT5G15360 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.32 -0.29
72 AT1G68930 pentatricopeptide (PPR) repeat-containing protein 0.56 0.32 -0.3
73 AT5G22510 alkaline/neutral invertase alkaline/neutral invertase E,
Arabidopsis alkaline/neutral
invertase E, alkaline/neutral
invertase E		 0.56 0.3 -0.3
74 AT4G09420 Disease resistance protein (TIR-NBS class) 0.55 0.31 -0.34
75 AT1G49950 telomere repeat binding factor 1 TELOMERE REPEAT BINDING FACTOR 1,
telomere repeat binding factor 1		 0.55 0.32 -0.37
76 AT1G63900 E3 Ubiquitin ligase family protein DIAP1-like protein 1 0.54 0.32 -0.32
77 AT1G44800 nodulin MtN21 /EamA-like transporter family protein 0.54 0.31 -0.31
78 AT1G47270 tubby like protein 6 tubby like protein 6, tubby like
protein 6		 0.54 0.3 -0.3
79 AT4G01910 Cysteine/Histidine-rich C1 domain family protein 0.54 0.31 -0.31
80 AT4G36480 long-chain base1 long-chain base1, EMBRYO DEFECTIVE
2779, FUMONISIN B1 RESISTANT 11,
long-chain base1		 -0.54 0.31 -0.32
81 AT1G70060 SIN3-like 4 SIN3-like 4 0.54 0.3 -0.32
82 AT4G24390 RNI-like superfamily protein auxin signaling F-box 4 0.53 0.34 -0.34
83 AT1G35150 General transcription factor 2-related zinc finger protein 0.53 0.3 -0.32
84 AT4G08110 transposable element gene 0.53 0.3 -0.33
85 AT5G06820 STRUBBELIG-receptor family 2 STRUBBELIG-receptor family 2 -0.53 0.3 -0.31
86 AT4G05050 ubiquitin 11 ubiquitin 11 0.53 0.32 -0.32
87 AT4G22280 F-box/RNI-like superfamily protein -0.53 0.33 -0.31
88 AT5G23460 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.52 0.3 -0.32
89 AT1G64100 pentatricopeptide (PPR) repeat-containing protein -0.52 0.31 -0.33
90 AT1G52770 Phototropic-responsive NPH3 family protein -0.51 0.31 -0.31
91 AT1G54040 epithiospecifier protein epithiospecifier protein,
EPITHIOSPECIFYING SENESCENCE
REGULATOR, TASTY		 -0.51 0.33 -0.31
92 AT4G03050 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 AOP3 -0.49 0.32 -0.32
93 AT5G37130 Protein prenylyltransferase superfamily protein -0.48 0.31 -0.32
94 AT5G03690 Aldolase superfamily protein -0.48 0.31 -0.33
95 AT2G46310 cytokinin response factor 5 cytokinin response factor 5 -0.48 0.32 -0.31
96 AT3G05430 Tudor/PWWP/MBT superfamily protein -0.47 0.31 -0.32
97 AT1G76370 Protein kinase superfamily protein -0.45 0.3 -0.33
98 AT1G18410 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.45 0.31 -0.33
99 AT4G15710 unknown protein; Has 18 Blast hits to 18 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.45 0.31 -0.31
100 AT2G06330 transposable element gene -0.44 0.33 -0.31
101 AT5G05660 sequence-specific DNA binding transcription factors;zinc
ion binding;sequence-specific DNA binding transcription
factors		 Arabidopsis NF-X like 2, EARLY
BIRD, NFX1-like 2		 -0.41 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
102 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.86 0.45 -0.44 C0033
103 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine 0.85 0.49 -0.43 C0038
104 C0178 MST_2446.7 - - - -0.71 0.47 -0.48
105 C0037 5-Methylsulfinyl-n-pentylglucosinolate - 5-Methylsulfinylpentyl glucosinolate glucosinolate biosynthesis from trihomomethionine 0.69 0.32 -0.32 C0037
106 C0244 Sucrose D-Sucrose Sucrose stachyose biosynthesis,
fructan degradation,
stachyose degradation,
galactose degradation III,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
sucrose degradation III,
UDP-glucose biosynthesis (from sucrose),
ajugose biosynthesis II (galactinol-independent),
sucrose biosynthesis I 		0.68 0.32 -0.3 C0244
107 C0034 4-Methylthio-n-butylglucosinolate - 4-Methylthiobutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.65 0.31 -0.31 C0034
108 C0060 Asparagine D,L-Asparagine L-Asparagine asparagine degradation I,
asparagine biosynthesis III (tRNA-dependent),
asparagine biosynthesis I,
tRNA charging,
cyanide detoxification II 		-0.55 0.3 -0.33 C0060
109 C0040 6-Methylsulfinyl-n-hexylglucosinolate - 6-Methylsulfinylhexyl glucosinolate glucosinolate biosynthesis from tetrahomomethionine 0.53 0.32 -0.33 C0040
110 C0101 Glutamic acid D,L-Glutamic acid L-Glutamate; D-Glutamate tyrosine biosynthesis I,
serine biosynthesis,
tyrosine degradation I,
uridine-5'-phosphate biosynthesis,
proline biosynthesis III,
glutamate biosynthesis V,
glycine biosynthesis,
lysine biosynthesis VI,
leucine biosynthesis,
UDP-N-acetyl-D-glucosamine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle (plant pathway),
L-Ndelta-acetylornithine biosynthesis,
tryptophan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
4-hydroxyphenylpyruvate biosynthesis,
proline degradation II,
photorespiration,
5-aminoimidazole ribonucleotide biosynthesis I,
folate polyglutamylation,
ammonia assimilation cycle II,
arginine degradation VI (arginase 2 pathway),
asparagine biosynthesis III (tRNA-dependent),
tetrahydrofolate biosynthesis II,
glutamine biosynthesis III,
valine degradation I,
glucosinolate biosynthesis from dihomomethionine,
phenylalanine biosynthesis II,
citrulline biosynthesis,
gamma-glutamyl cycle,
indole-3-acetyl-amino acid biosynthesis,
purine nucleotides de novo biosynthesis II,
IAA biosynthesis I,
NAD biosynthesis I (from aspartate),
alanine biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
glucosinolate biosynthesis from homomethionine,
phenylalanine degradation III,
ornithine biosynthesis,
glutathione-mediated detoxification II,
pyrimidine ribonucleotides interconversion,
indole glucosinolate breakdown (active in intact plant cell),
aspartate degradation II,
glucosinolate biosynthesis from trihomomethionine,
glucosinolate biosynthesis from tetrahomomethionine,
L-glutamine biosynthesis II (tRNA-dependent),
camalexin biosynthesis,
glutathione biosynthesis,
aspartate biosynthesis,
leucine degradation I,
glutathione degradation,
pyridine nucleotide cycling (plants),
glutamate degradation I,
valine biosynthesis,
glucosinolate biosynthesis from tryptophan,
arginine biosynthesis II (acetyl cycle),
isoleucine biosynthesis I (from threonine),
arginine biosynthesis I,
arginine degradation I (arginase pathway),
glucosinolate biosynthesis from hexahomomethionine,
tetrapyrrole biosynthesis I,
alanine degradation III,
pyridoxal 5'-phosphate biosynthesis II,
glutamate biosynthesis IV,
glutamate degradation IV,
asparagine biosynthesis I,
histidine biosynthesis,
lysine degradation II,
pantothenate biosynthesis,
isoleucine degradation I,
folate polyglutamylation II,
glutamine biosynthesis I,
glucosinolate biosynthesis from phenylalanine,
tyrosine biosynthesis II,
nitrate reduction II (assimilatory),
alanine degradation II (to D-lactate) 		-0.53 0.31 -0.3 C0101