AT3G61630 : cytokinin response factor 6
Query Information
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AGICode AT3G61630
Description cytokinin response factor 6
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G61630 cytokinin response factor 6 cytokinin response factor 6 1 0.32 -0.3
2 AT4G21400 cysteine-rich RLK (RECEPTOR-like protein kinase) 28 cysteine-rich RLK (RECEPTOR-like
protein kinase) 28		 0.71 0.3 -0.3
3 AT1G21910 Integrase-type DNA-binding superfamily protein dehydration response
element-binding protein 26		 0.66 0.32 -0.31
4 AT1G01900 subtilase family protein ATSBT1.1, SBTI1.1 -0.65 0.33 -0.33
5 AT3G27170 chloride channel B ATCLC-B, chloride channel B 0.64 0.31 -0.3
6 AT1G10640 Pectin lyase-like superfamily protein -0.63 0.33 -0.34
7 AT1G17470 developmentally regulated G-protein 1 ATDRG, developmentally regulated
G-protein 1, developmentally
regulated G-protein 1		 0.63 0.32 -0.31
8 AT5G20270 heptahelical transmembrane protein1 heptahelical transmembrane
protein1		 -0.63 0.29 -0.3
9 AT5G64080 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP1, xylogen protein 1 -0.63 0.33 -0.29
10 AT5G65500 U-box domain-containing protein kinase family protein -0.62 0.31 -0.3
11 AT4G30280 xyloglucan endotransglucosylase/hydrolase 18 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 18,
xyloglucan
endotransglucosylase/hydrolase 18		 0.62 0.31 -0.32
12 AT5G10290 leucine-rich repeat transmembrane protein kinase family
protein		 0.62 0.32 -0.31
13 AT2G39660 botrytis-induced kinase1 botrytis-induced kinase1 0.61 0.32 -0.3
14 AT2G38080 Laccase/Diphenol oxidase family protein ARABIDOPSIS LACCASE-LIKE
MULTICOPPER OXIDASE 4, IRREGULAR
XYLEM 12, LACCASE 4, LACCASE-LIKE
MULTICOPPER OXIDASE 4		 -0.61 0.31 -0.32
15 AT4G20840 FAD-binding Berberine family protein 0.61 0.32 -0.32
16 AT2G04850 Auxin-responsive family protein -0.61 0.32 -0.3
17 AT5G20990 molybdopterin biosynthesis CNX1 protein / molybdenum
cofactor biosynthesis enzyme CNX1 (CNX1)		 B73, CHLORATE RESISTANT 6,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE 1,
SIRTINOL 4		 0.6 0.32 -0.28
18 AT3G19790 unknown protein; Has 32 Blast hits to 26 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 2;
Plants - 14; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.6 0.32 -0.3
19 AT5G60590 DHBP synthase RibB-like alpha/beta domain 0.6 0.3 -0.3
20 AT5G60020 laccase 17 ATLAC17, laccase 17 -0.59 0.31 -0.33
21 AT2G42280 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.59 0.31 -0.32
22 AT5G38195 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.59 0.31 -0.34
23 AT4G00440 Protein of unknown function (DUF3741) -0.59 0.32 -0.33
24 AT5G15630 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA-LIKE4, IRREGULAR XYLEM 6 -0.59 0.33 -0.32
25 AT3G31300 transposable element gene 0.59 0.3 -0.31
26 AT1G69850 nitrate transporter 1:2 nitrate transporter 1:2, nitrate
transporter 1:2, NTL1		 0.59 0.34 -0.32
27 AT3G02240 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 7 0.59 0.31 -0.3
28 AT2G41330 Glutaredoxin family protein -0.58 0.3 -0.31
29 AT1G19380 Protein of unknown function (DUF1195) 0.58 0.32 -0.32
30 AT5G23405 HMG-box (high mobility group) DNA-binding family protein 0.58 0.31 -0.3
31 AT3G61970 AP2/B3-like transcriptional factor family protein NGATHA2 -0.58 0.32 -0.29
32 AT5G14800 pyrroline-5- carboxylate (P5C) reductase AT-P5C1, PYRROLINE-5- CARBOXYLATE
(P5C) REDUCTASE, EMBRYO DEFECTIVE
2772, pyrroline-5- carboxylate
(P5C) reductase		 0.58 0.31 -0.32
33 AT5G03690 Aldolase superfamily protein 0.58 0.31 -0.31
34 AT1G20890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G76480.2); Has 33 Blast hits to 33 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.58 0.32 -0.31
35 AT3G52710 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G36220.1); Has 64 Blast
hits to 64 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.32 -0.34
36 AT5G17420 Cellulose synthase family protein ATCESA7, CELLULOSE SYNTHASE
CATALYTIC SUBUNIT 7, IRREGULAR
XYLEM 3, MURUS 10		 -0.57 0.32 -0.29
37 AT5G08335 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ARABIDOPSIS THALIANA ISOPRENYL
CYSTEINE METHYLTRANSFERASE B,
ATSTE14B, ISOPRENYL CYSTEINE
METHYLTRANSFERASE B		 0.57 0.32 -0.29
38 AT3G23160 Protein of unknown function (DUF668) -0.56 0.31 -0.31
39 AT3G13980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits
to 418 proteins in 98 species: Archae - 0; Bacteria - 6;
Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other
Eukaryotes - 1059 (source: NCBI BLink).		 -0.56 0.34 -0.3
40 AT2G42200 squamosa promoter binding protein-like 9 AtSPL9, squamosa promoter binding
protein-like 9		 -0.56 0.32 -0.31
41 AT3G47570 Leucine-rich repeat protein kinase family protein 0.56 0.32 -0.31
42 AT4G18425 Protein of unknown function (DUF679) -0.56 0.29 -0.36
43 AT5G42830 HXXXD-type acyl-transferase family protein 0.55 0.32 -0.33
44 AT2G04630 RNA polymerase Rpb6 NRPB6B, NRPE6B 0.55 0.32 -0.32
45 AT1G51860 Leucine-rich repeat protein kinase family protein 0.55 0.31 -0.33
46 AT4G02380 senescence-associated gene 21 Arabidopsis thaliana late
embryogenensis abundant like 5,
senescence-associated gene 21		 0.55 0.3 -0.32
47 AT1G26290 unknown protein; Has 126 Blast hits to 112 proteins in 36
species: Archae - 0; Bacteria - 6; Metazoa - 14; Fungi - 3;
Plants - 14; Viruses - 0; Other Eukaryotes - 89 (source:
NCBI BLink).		 -0.55 0.29 -0.3
48 AT3G51330 Eukaryotic aspartyl protease family protein 0.55 0.31 -0.31
49 AT1G51730 Ubiquitin-conjugating enzyme family protein 0.55 0.31 -0.31
50 AT5G08360 Protein of unknown function (DUF789) 0.55 0.33 -0.29
51 AT1G74420 fucosyltransferase 3 ATFUT3, fucosyltransferase 3 -0.54 0.3 -0.35
52 AT3G10080 RmlC-like cupins superfamily protein -0.53 0.32 -0.3
53 AT2G31450 DNA glycosylase superfamily protein ATNTH1 -0.53 0.3 -0.31
54 AT3G20070 titan9 TITAN9 -0.53 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
55 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		-0.83 0.47 -0.5 C0109
56 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.75 0.45 -0.46 C0107
57 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.73 0.45 -0.41 C0032
58 C0160 MST_1509.5 - - - 0.72 0.44 -0.43
59 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		-0.71 0.44 -0.45 C0016
60 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		-0.69 0.45 -0.44 C0056
61 C0163 MST_1589.2 - - - 0.66 0.46 -0.47
62 C0161 MST_1566.3 - - - 0.65 0.43 -0.44
63 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis -0.63 0.44 -0.47 C0234
64 C0006 β-Homothreonine L-β-Homothreonine - - -0.6 0.41 -0.43
65 C0116 Hydroxylamine - Hydroxylamine - -0.58 0.45 -0.45 C0116
66 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) -0.57 0.44 -0.46 C0075