AT3G60010 : SKP1-like 13
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G60010
Description SKP1-like 13
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G60010 SKP1-like 13 SKP1-like 13, SKP1-like 13 1 0.32 -0.31
2 AT5G03620 Subtilisin-like serine endopeptidase family protein 0.61 0.32 -0.33
3 AT1G70950 TPX2 (targeting protein for Xklp2) protein family 0.59 0.33 -0.31
4 AT1G80730 zinc-finger protein 1 ARABIDOPSIS THALIANA ZINC-FINGER
PROTEIN 1, zinc-finger protein 1		 0.57 0.34 -0.28
5 AT3G55370 OBF-binding protein 3 OBF-binding protein 3 0.56 0.3 -0.3
6 AT4G14290 alpha/beta-Hydrolases superfamily protein 0.53 0.29 -0.31
7 AT1G70895 CLAVATA3/ESR-RELATED 17 CLAVATA3/ESR-RELATED 17 0.53 0.32 -0.32
8 AT3G50160 Plant protein of unknown function (DUF247) -0.51 0.3 -0.32
9 AT4G17730 syntaxin of plants 23 ATSYP23, syntaxin of plants 23 0.5 0.32 -0.29
10 AT5G16950 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.49 0.31 -0.32
11 AT5G24510 60S acidic ribosomal protein family 0.49 0.34 -0.32
12 AT1G22015 Galactosyltransferase family protein DD46 0.49 0.33 -0.32
13 AT3G29610 transposable element gene 0.49 0.32 -0.29
14 AT3G54240 alpha/beta-Hydrolases superfamily protein 0.47 0.32 -0.33
15 AT2G18630 Protein of unknown function (DUF677) 0.47 0.34 -0.33
16 AT3G61090 Putative endonuclease or glycosyl hydrolase 0.47 0.31 -0.31
17 AT4G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G15990.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.45 0.32 -0.31
18 AT1G73910 actin-related proteins 4A actin-related proteins 4A,
actin-related proteins 4A		 0.45 0.31 -0.29
19 AT4G03290 EF hand calcium-binding protein family 0.44 0.29 -0.32
20 AT3G12190 BEST Arabidopsis thaliana protein match is: Frigida-like
protein (TAIR:AT5G27220.1); Has 43637 Blast hits to 24906
proteins in 1566 species: Archae - 743; Bacteria - 4122;
Metazoa - 22377; Fungi - 2585; Plants - 1803; Viruses -
158; Other Eukaryotes - 11849 (source: NCBI BLink).		 0.43 0.32 -0.32
21 AT4G28580 magnesium transport 5 ARABIDOPSIS THALIANA MAGNESIUM
TRANSPORT 5, magnesium transport
5, MRS2-6		 -0.43 0.32 -0.32
22 AT1G54880 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.43 0.32 -0.32
23 AT3G16710 Pentatricopeptide repeat (PPR) superfamily protein 0.42 0.3 -0.31
24 AT2G41860 calcium-dependent protein kinase 14 calcium-dependent protein kinase
14		 0.42 0.31 -0.29
25 AT3G43310 pseudogene, hypothetical protein, hypothetical protein
At2g15420 - Arabidopsis thaliana, EMBL:AC006920		 -0.42 0.33 -0.3
26 AT5G26070 hydroxyproline-rich glycoprotein family protein 0.41 0.32 -0.33
27 AT1G23250 Caleosin-related family protein 0.41 0.3 -0.33
28 AT4G08820 transposable element gene -0.4 0.3 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
29 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		-0.58 0.48 -0.44 C0186
30 C0102 Glutamine D,L-Glutamine L-Glutamine ammonia assimilation cycle II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
tetrahydrofolate biosynthesis II,
NAD biosynthesis I (from aspartate),
nitrate reduction II (assimilatory),
5-aminoimidazole ribonucleotide biosynthesis I,
citrulline biosynthesis,
pyrimidine ribonucleotides interconversion,
histidine biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
pyridoxal 5'-phosphate biosynthesis II,
arginine biosynthesis I,
UDP-N-acetyl-D-glucosamine biosynthesis II,
pyridine nucleotide cycling (plants),
glutamate biosynthesis IV,
glutamine biosynthesis III,
glutamate biosynthesis V,
asparagine biosynthesis III (tRNA-dependent),
tryptophan biosynthesis,
L-glutamine biosynthesis II (tRNA-dependent),
uridine-5'-phosphate biosynthesis,
tRNA charging,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
asparagine biosynthesis I 		-0.47 0.32 -0.31 C0102
31 C0114 Homocystine L-Homocystine - - -0.45 0.32 -0.32