AT3G56580 : -
Query Information
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AGICode AT3G56580
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G56580 RING/U-box superfamily protein 1 0.3 -0.32
2 AT4G36250 aldehyde dehydrogenase 3F1 aldehyde dehydrogenase 3F1 0.86 0.29 -0.31
3 AT4G24510 HXXXD-type acyl-transferase family protein ECERIFERUM 2, VC-2, VC2 0.79 0.3 -0.33
4 AT3G55360 3-oxo-5-alpha-steroid 4-dehydrogenase family protein ATTSC13, ECERIFERUM 10, ENOYL-COA
REDUCTASE, TSC13		 0.78 0.32 -0.33
5 AT1G29760 Putative adipose-regulatory protein (Seipin) -0.77 0.31 -0.32
6 AT3G23810 S-adenosyl-l-homocysteine (SAH) hydrolase 2 S-ADENOSYL-L-HOMOCYSTEINE (SAH)
HYDROLASE 2,
S-adenosyl-l-homocysteine (SAH)
hydrolase 2		 0.76 0.32 -0.32
7 AT4G25830 Uncharacterised protein family (UPF0497) 0.76 0.32 -0.3
8 AT3G49220 Plant invertase/pectin methylesterase inhibitor superfamily 0.75 0.3 -0.32
9 AT5G22880 histone B2 HISTONE H2B, histone B2 0.75 0.31 -0.31
10 AT2G37640 Barwin-like endoglucanases superfamily protein EXPANSIN 3, ARABIDOPSIS THALIANA
EXPANSIN A3, ATHEXP ALPHA 1.9,
EXP3		 0.75 0.31 -0.29
11 AT4G33220 pectin methylesterase 44 A. THALIANA PECTIN METHYLESTERASE
44, pectin methylesterase 44		 0.74 0.31 -0.33
12 AT4G18060 SH3 domain-containing protein 0.74 0.29 -0.32
13 AT1G27950 glycosylphosphatidylinositol-anchored lipid protein
transfer 1		 glycosylphosphatidylinositol-ancho
red lipid protein transfer 1		 0.74 0.3 -0.31
14 AT1G62640 3-ketoacyl-acyl carrier protein synthase III 3-ketoacyl-acyl carrier protein
synthase III		 0.73 0.32 -0.33
15 AT1G78280 transferases, transferring glycosyl groups -0.73 0.34 -0.31
16 AT3G53700 Pentatricopeptide repeat (PPR) superfamily protein maternal effect embryo arrest 40 0.73 0.32 -0.35
17 AT2G27500 Glycosyl hydrolase superfamily protein -0.72 0.3 -0.33
18 AT2G22300 signal responsive 1 CALMODULIN-BINDING TRANSCRIPTION
ACTIVATOR 3, signal responsive 1		 -0.72 0.3 -0.34
19 AT5G53140 Protein phosphatase 2C family protein 0.71 0.31 -0.31
20 AT5G57760 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.69 0.32 -0.32
21 AT4G15330 cytochrome P450, family 705, subfamily A, polypeptide 1 cytochrome P450, family 705,
subfamily A, polypeptide 1		 -0.68 0.31 -0.31
22 AT1G24440 RING/U-box superfamily protein -0.68 0.29 -0.32
23 AT1G15110 phosphatidyl serine synthase family protein phosphatidylserine synthase 1 -0.68 0.31 -0.32
24 AT2G03240 EXS (ERD1/XPR1/SYG1) family protein -0.67 0.31 -0.31
25 AT1G35350 EXS (ERD1/XPR1/SYG1) family protein -0.67 0.28 -0.32
26 AT4G14350 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 -0.67 0.33 -0.32
27 AT5G55970 RING/U-box superfamily protein -0.66 0.32 -0.31
28 AT3G16860 COBRA-like protein 8 precursor COBRA-like protein 8 precursor -0.66 0.32 -0.3
29 AT4G30350 Double Clp-N motif-containing P-loop nucleoside
triphosphate hydrolases superfamily protein		 -0.66 0.32 -0.29
30 AT3G19190 autophagy 2 ATATG2, AUTOPHAGY 2 -0.65 0.31 -0.32
31 AT2G42760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881); Has 170
Blast hits to 164 proteins in 34 species: Archae - 0;
Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107;
Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).		 -0.65 0.31 -0.33
32 AT3G57530 calcium-dependent protein kinase 32 ATCPK32, CDPK32, calcium-dependent
protein kinase 32		 -0.64 0.33 -0.31
33 AT5G52050 MATE efflux family protein -0.63 0.31 -0.32
34 AT2G17550 unknown protein; Has 264 Blast hits to 258 proteins in 65
species: Archae - 5; Bacteria - 5; Metazoa - 66; Fungi -
16; Plants - 107; Viruses - 0; Other Eukaryotes - 65
(source: NCBI BLink).		 -0.63 0.3 -0.32
35 AT2G23320 WRKY DNA-binding protein 15 WRKY DNA-binding protein 15 -0.63 0.3 -0.29
36 AT1G66160 CYS, MET, PRO, and GLY protein 1 ATCMPG1, CYS, MET, PRO, and GLY
protein 1		 -0.62 0.31 -0.31
37 AT2G41640 Glycosyltransferase family 61 protein -0.61 0.3 -0.32
38 AT4G10930 unknown protein; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.61 0.31 -0.31
39 AT5G59820 C2H2-type zinc finger family protein RESPONSIVE TO HIGH LIGHT 41, ZAT12 -0.6 0.32 -0.3
40 AT3G21260 Glycolipid transfer protein (GLTP) family protein GLYCOLIPID TRANSFER PROTEIN 3 -0.6 0.32 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
41 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.79 0.44 -0.45 C0120
42 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		-0.78 0.45 -0.44 C0220