AT3G53710 : ARF-GAP domain 6
Query Information
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AGICode AT3G53710
Description ARF-GAP domain 6
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G53710 ARF-GAP domain 6 ARF-GAP domain 6 1 0.32 -0.31
2 AT1G59900 pyruvate dehydrogenase complex E1 alpha subunit pyruvate dehydrogenase complex E1
alpha subunit, pyruvate
dehydrogenase complex E1 alpha
subunit		 0.94 0.32 -0.33
3 AT1G68370 Chaperone DnaJ-domain superfamily protein ALTERED RESPONSE TO GRAVITY 1 0.91 0.32 -0.31
4 AT4G13050 Acyl-ACP thioesterase 0.89 0.32 -0.31
5 AT5G05750 DNAJ heat shock N-terminal domain-containing protein 0.88 0.33 -0.29
6 AT5G17890 DA1-related protein 4 CHILLING SENSITIVE 3, DA1-related
protein 4		 0.86 0.33 -0.31
7 AT5G05890 UDP-Glycosyltransferase superfamily protein 0.85 0.32 -0.33
8 AT5G20580 BEST Arabidopsis thaliana protein match is: FRIGIDA
interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast
hits to 167 proteins in 73 species: Archae - 0; Bacteria -
25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0;
Other Eukaryotes - 16 (source: NCBI BLink).		 0.85 0.3 -0.32
9 AT5G17870 plastid-specific 50S ribosomal protein 6 plastid-specific 50S ribosomal
protein 6		 0.84 0.31 -0.34
10 AT1G62850 Class I peptide chain release factor 0.84 0.31 -0.31
11 AT5G23230 nicotinamidase 2 nicotinamidase 2 0.84 0.33 -0.31
12 AT1G65290 mitochondrial acyl carrier protein 2 mitochondrial acyl carrier protein
2		 0.83 0.31 -0.3
13 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family 0.82 0.32 -0.32
14 AT1G58150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: in 9 processes; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.82 0.31 -0.3
15 AT1G47250 20S proteasome alpha subunit F2 20S proteasome alpha subunit F2 0.81 0.33 -0.32
16 AT4G11100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03060.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.81 0.34 -0.33
17 AT5G39990 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.8 0.31 -0.32
18 AT4G11830 phospholipase D gamma 2 phospholipase D gamma 2 0.8 0.32 -0.35
19 AT1G43170 ribosomal protein 1 ribosomal protein 1, embryo
defective 2207, ribosomal protein
1, RPL3A		 0.8 0.32 -0.3
20 AT5G35730 EXS (ERD1/XPR1/SYG1) family protein 0.8 0.32 -0.32
21 AT1G65280 DNAJ heat shock N-terminal domain-containing protein 0.8 0.32 -0.3
22 AT4G13630 Protein of unknown function, DUF593 0.79 0.32 -0.34
23 AT5G17880 disease resistance protein (TIR-NBS-LRR class) constitutive shade-avoidance1 0.79 0.3 -0.32
24 AT1G74320 Protein kinase superfamily protein 0.79 0.32 -0.32
25 AT1G52760 lysophospholipase 2 lysophospholipase 2 0.79 0.31 -0.31
26 AT1G66540 Cytochrome P450 superfamily protein 0.79 0.33 -0.31
27 AT5G39950 thioredoxin 2 Arabidopsis thioredoxin h2,
thioredoxin 2, ATTRXH2,
thioredoxin 2, THIOREDOXIN H2		 0.78 0.33 -0.33
28 AT4G19240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43280.1); Has 19 Blast hits
to 17 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.77 0.33 -0.34
29 AT1G64190 6-phosphogluconate dehydrogenase family protein 0.76 0.32 -0.29
30 AT5G15980 Pentatricopeptide repeat (PPR) superfamily protein 0.76 0.32 -0.31
31 AT5G38630 cytochrome B561-1 cytochrome B561-1, cytochrome
B561-1		 0.75 0.31 -0.32
32 AT5G37290 ARM repeat superfamily protein 0.75 0.33 -0.3
33 AT5G28050 Cytidine/deoxycytidylate deaminase family protein 0.75 0.31 -0.32
34 AT5G26270 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.75 0.32 -0.28
35 AT1G49950 telomere repeat binding factor 1 TELOMERE REPEAT BINDING FACTOR 1,
telomere repeat binding factor 1		 0.75 0.31 -0.33
36 AT1G64270 transposable element gene 0.74 0.31 -0.32
37 AT5G23570 XS domain-containing protein / XS zinc finger
domain-containing protein-related		 SUPPRESSOR OF GENE SILENCING 3,
SUPPRESSOR OF GENE SILENCING 3		 -0.74 0.3 -0.31
38 AT5G23710 DNA binding;DNA-directed RNA polymerases 0.74 0.32 -0.32
39 AT4G27050 F-box/RNI-like superfamily protein -0.74 0.31 -0.36
40 AT1G52100 Mannose-binding lectin superfamily protein 0.73 0.32 -0.32
41 AT1G64300 Protein kinase family protein 0.73 0.31 -0.29
42 AT4G09680 conserved telomere maintenance component 1 ATCTC1, conserved telomere
maintenance component 1		 0.72 0.31 -0.32
43 AT1G65370 TRAF-like family protein 0.72 0.31 -0.3
44 AT5G03200 RING/U-box superfamily protein 0.72 0.31 -0.31
45 AT1G62830 LSD1-like 1 ARABIDOPSIS LYSINE-SPECIFIC
HISTONE DEMETHYLASE, ATSWP1,
LSD1-like 1, LYSINE-SPECIFIC
HISTONE DEMETHYLASE, SWP1		 0.71 0.33 -0.32
46 AT5G37830 oxoprolinase 1 oxoprolinase 1 0.71 0.3 -0.32
47 AT4G01130 GDSL-like Lipase/Acylhydrolase superfamily protein 0.71 0.31 -0.31
48 AT1G79000 histone acetyltransferase of the CBP family 1 ARABIDOPSIS HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 1, ARABIDOPSIS THALIANA
P300/CBP ACETYLTRANSFERASE-RELATED
PROTEIN 2, histone
acetyltransferase of the CBP
family 1, P300/CBP
ACETYLTRANSFERASE-RELATED PROTEIN
2		 0.71 0.33 -0.32
49 AT1G67550 urease urease 0.71 0.32 -0.3
50 AT5G03345 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Magnesium transporter (InterPro:IPR018937); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.7 0.32 -0.31
51 AT1G50290 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.7 0.32 -0.3
52 AT5G10620 methyltransferases 0.7 0.33 -0.31
53 AT5G42280 Cysteine/Histidine-rich C1 domain family protein 0.7 0.32 -0.29
54 AT5G08535 D111/G-patch domain-containing protein 0.7 0.31 -0.32
55 AT3G55170 Ribosomal L29 family protein 0.7 0.31 -0.32
56 AT4G12060 Double Clp-N motif protein 0.69 0.31 -0.31
57 AT1G61790 Oligosaccharyltransferase complex/magnesium transporter
family protein		 0.69 0.35 -0.32
58 AT4G08280 Thioredoxin superfamily protein 0.69 0.33 -0.31
59 AT5G05760 syntaxin of plants 31 ATSED5, ATSYP31, T-SNARE SED 5,
syntaxin of plants 31		 0.69 0.31 -0.3
60 AT4G12840 Protein of unknown function (DUF707) 0.69 0.33 -0.31
61 AT1G71440 tubulin folding cofactor E / Pfifferling (PFI) PFIFFERLING, TUBULIN-FOLDING
COFACTOR E		 0.68 0.33 -0.31
62 AT1G47420 succinate dehydrogenase 5 succinate dehydrogenase 5 0.68 0.3 -0.31
63 AT4G22280 F-box/RNI-like superfamily protein -0.68 0.33 -0.33
64 AT4G32960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits
to 106 proteins in 39 species: Archae - 0; Bacteria - 0;
Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.68 0.33 -0.32
65 AT4G13520 small acidic protein 1 small acidic protein 1 0.68 0.32 -0.3
66 AT5G28030 L-cysteine desulfhydrase 1 L-cysteine desulfhydrase 1 -0.68 0.32 -0.31
67 AT1G64490 DEK, chromatin associated protein 0.68 0.31 -0.34
68 AT5G27270 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 976 0.68 0.32 -0.32
69 AT4G31570 CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G24460.1); Has 194354 Blast hits to 66887 proteins
in 3244 species: Archae - 3688; Bacteria - 38556; Metazoa -
84828; Fungi - 17265; Plants - 10589; Viruses - 805; Other
Eukaryotes - 38623 (source: NCBI BLink).		 -0.68 0.3 -0.34
70 AT1G51440 alpha/beta-Hydrolases superfamily protein 0.68 0.31 -0.32
71 AT1G52260 PDI-like 1-5 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 3, PDI-like
1-5, PROTEIN DISULFIDE ISOMERASE
3, PDI-like 1-5		 0.68 0.32 -0.31
72 AT1G68930 pentatricopeptide (PPR) repeat-containing protein 0.67 0.3 -0.33
73 AT1G51430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G28370.1); Has 13 Blast hits
to 13 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.31 -0.32
74 AT1G60710 NAD(P)-linked oxidoreductase superfamily protein ATB2 0.67 0.31 -0.3
75 AT1G62330 O-fucosyltransferase family protein 0.67 0.33 -0.32
76 AT1G47270 tubby like protein 6 tubby like protein 6, tubby like
protein 6		 0.67 0.31 -0.32
77 AT5G37130 Protein prenylyltransferase superfamily protein -0.66 0.32 -0.32
78 AT1G73200 Putative integral membrane protein conserved region
(DUF2404)		 0.65 0.3 -0.31
79 AT4G02450 HSP20-like chaperones superfamily protein 0.65 0.31 -0.31
80 AT1G69720 heme oxygenase 3 heme oxygenase 3 -0.65 0.3 -0.34
81 AT5G17240 SET domain group 40 SET domain group 40 0.65 0.3 -0.3
82 AT5G27990 Pre-rRNA-processing protein TSR2, conserved region 0.65 0.33 -0.31
83 AT1G63540 hydroxyproline-rich glycoprotein family protein -0.65 0.31 -0.31
84 AT1G51360 dimeric A/B barrel domainS-protein 1 DIMERIC A/B BARREL DOMAINS-PROTEIN
1, dimeric A/B barrel
domainS-protein 1		 0.65 0.32 -0.33
85 AT4G22960 Protein of unknown function (DUF544) -0.64 0.31 -0.32
86 AT1G61730 DNA-binding storekeeper protein-related transcriptional
regulator		 0.64 0.32 -0.31
87 AT1G64100 pentatricopeptide (PPR) repeat-containing protein -0.64 0.33 -0.31
88 AT4G25710 Galactose oxidase/kelch repeat superfamily protein 0.64 0.31 -0.31
89 AT4G05050 ubiquitin 11 ubiquitin 11 0.64 0.3 -0.31
90 AT5G23770 DOMAIN OF UNKNOWN FUNCTION 724 8 DOMAIN OF UNKNOWN FUNCTION 724 8,
DOMAIN OF UNKNOWN FUNCTION 724 8		 -0.64 0.34 -0.3
91 AT3G53370 S1FA-like DNA-binding protein 0.63 0.3 -0.31
92 AT3G15800 Glycosyl hydrolase superfamily protein 0.63 0.31 -0.3
93 AT5G40190 RNA ligase/cyclic nucleotide phosphodiesterase family
protein		 0.63 0.33 -0.33
94 AT5G52070 Agenet domain-containing protein -0.63 0.3 -0.33
95 AT5G38380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: membrane; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF6, transmembrane (InterPro:IPR000620); BEST
Arabidopsis thaliana protein match is: Cation efflux family
protein (TAIR:AT2G04620.1); Has 123 Blast hits to 121
proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa -
69; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes -
9 (source: NCBI BLink).		 0.62 0.32 -0.31
96 AT3G08890 Protein of unknown function, DUF538 0.62 0.3 -0.33
97 AT1G48310 chromatin remodeling factor18 CHA18, chromatin remodeling
factor18		 -0.62 0.32 -0.3
98 AT5G27110 Tetratricopeptide repeat (TPR)-like superfamily protein 0.62 0.32 -0.31
99 AT5G53130 cyclic nucleotide gated channel 1 CYCLIC NUCLEOTIDE-GATED CHANNEL 1,
cyclic nucleotide gated channel 1		 0.62 0.32 -0.32
100 AT1G70060 SIN3-like 4 SIN3-like 4 0.62 0.31 -0.33
101 AT5G40950 ribosomal protein large subunit 27 ribosomal protein large subunit 27 0.61 0.3 -0.32
102 AT5G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.31 -0.31
103 AT3G53260 phenylalanine ammonia-lyase 2 ATPAL2, phenylalanine
ammonia-lyase 2		 0.61 0.34 -0.3
104 AT1G63170 Zinc finger, C3HC4 type (RING finger) family protein 0.61 0.31 -0.33
105 AT5G22510 alkaline/neutral invertase alkaline/neutral invertase E,
Arabidopsis alkaline/neutral
invertase E, alkaline/neutral
invertase E		 0.61 0.32 -0.34
106 AT4G11410 NAD(P)-binding Rossmann-fold superfamily protein 0.61 0.32 -0.31
107 AT1G59960 NAD(P)-linked oxidoreductase superfamily protein 0.61 0.31 -0.34
108 AT5G15360 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.29 -0.34
109 AT4G03050 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 AOP3 -0.6 0.3 -0.3
110 AT1G69550 disease resistance protein (TIR-NBS-LRR class) 0.6 0.31 -0.31
111 AT4G12110 sterol-4alpha-methyl oxidase 1-1 ATSMO1-1, sterol-4alpha-methyl
oxidase 1-1		 0.6 0.33 -0.33
112 AT5G40500 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.6 0.34 -0.33
113 AT5G36890 beta glucosidase 42 beta glucosidase 42 0.6 0.31 -0.33
114 AT4G01790 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.6 0.3 -0.33
115 AT1G77080 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 27, FLOWERING LOCUS
M, MADS AFFECTING FLOWERING 1		 0.6 0.3 -0.29
116 AT4G23840 Leucine-rich repeat (LRR) family protein -0.59 0.31 -0.33
117 AT4G01270 RING/U-box superfamily protein -0.58 0.31 -0.32
118 AT1G71350 eukaryotic translation initiation factor SUI1 family
protein		 -0.58 0.31 -0.32
119 AT1G27590 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana
protein match is: phosphatidylinositol 3- and 4-kinase
family protein (TAIR:AT1G27570.1); Has 109 Blast hits to
109 proteins in 38 species: Archae - 0; Bacteria - 0;
Metazoa - 65; Fungi - 4; Plants - 38; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.56 0.32 -0.3
120 AT4G27820 beta glucosidase 9 beta glucosidase 9 -0.56 0.32 -0.33
121 AT5G26830 Threonyl-tRNA synthetase -0.55 0.3 -0.32
122 AT4G08960 phosphotyrosyl phosphatase activator (PTPA) family protein -0.54 0.31 -0.31
123 AT5G06820 STRUBBELIG-receptor family 2 STRUBBELIG-receptor family 2 -0.54 0.32 -0.3
124 AT1G54040 epithiospecifier protein epithiospecifier protein,
EPITHIOSPECIFYING SENESCENCE
REGULATOR, TASTY		 -0.54 0.33 -0.35
125 AT4G36380 Cytochrome P450 superfamily protein ROTUNDIFOLIA 3 -0.54 0.3 -0.31
126 AT5G24760 GroES-like zinc-binding dehydrogenase family protein -0.53 0.33 -0.31
127 AT3G30180 brassinosteroid-6-oxidase 2 brassinosteroid-6-oxidase 2,
CYP85A2		 -0.51 0.31 -0.3
128 AT4G29770 Target of trans acting-siR480/255. -0.49 0.31 -0.31
129 AT4G32230 unknown protein; Has 14 Blast hits to 14 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.49 0.33 -0.29
130 AT3G19350 maternally expressed pab C-terminal maternally expressed pab
C-terminal		 -0.48 0.28 -0.32
131 AT4G36480 long-chain base1 long-chain base1, EMBRYO DEFECTIVE
2779, FUMONISIN B1 RESISTANT 11,
long-chain base1		 -0.48 0.31 -0.34
132 AT1G80900 magnesium transporter 1 MAGNESIUM TRANSPORTER 1, magnesium
transporter 1, MRS2-10		 -0.47 0.32 -0.32
133 AT1G18410 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.47 0.31 -0.31
134 AT4G11000 Ankyrin repeat family protein -0.46 0.31 -0.31
135 AT3G30640 transposable element gene -0.44 0.33 -0.33
136 AT2G19230 Leucine-rich repeat transmembrane protein kinase protein -0.43 0.32 -0.32
137 AT1G33520 D111/G-patch domain-containing protein modifier of snc1, 2 -0.43 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
138 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.93 0.43 -0.45 C0033
139 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine 0.91 0.48 -0.46 C0038
140 C0183 MST_3033.1 - - - 0.86 0.44 -0.42
141 C0034 4-Methylthio-n-butylglucosinolate - 4-Methylthiobutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.84 0.32 -0.34 C0034
142 C0244 Sucrose D-Sucrose Sucrose stachyose biosynthesis,
fructan degradation,
stachyose degradation,
galactose degradation III,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
sucrose degradation III,
UDP-glucose biosynthesis (from sucrose),
ajugose biosynthesis II (galactinol-independent),
sucrose biosynthesis I 		0.79 0.32 -0.28 C0244
143 C0037 5-Methylsulfinyl-n-pentylglucosinolate - 5-Methylsulfinylpentyl glucosinolate glucosinolate biosynthesis from trihomomethionine 0.75 0.32 -0.34 C0037