AGICode | AT3G53520 |
Description | UDP-glucuronic acid decarboxylase 1 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G53520 | UDP-glucuronic acid decarboxylase 1 | ATUXS1, UDP-glucuronic acid decarboxylase 1 |
1 | 0.32 | -0.32 | ||
2 | AT2G25590 | Plant Tudor-like protein | -0.83 | 0.3 | -0.34 | |||
3 | AT5G57870 | MIF4G domain-containing protein / MA3 domain-containing protein |
eukaryotic translation Initiation Factor isoform 4G1 |
0.82 | 0.31 | -0.32 | ||
4 | AT1G53500 | NAD-dependent epimerase/dehydratase family protein | ARABIDOPSIS THALIANA MUCILAGE-MODIFIED 4, ARABIDOPSIS THALIANA RHAMNOSE BIOSYNTHESIS 2, MUCILAGE-MODIFIED 4, RHAMNOSE BIOSYNTHESIS 2 |
0.82 | 0.3 | -0.34 | ||
5 | AT1G75200 | flavodoxin family protein / radical SAM domain-containing protein |
0.82 | 0.32 | -0.3 | |||
6 | AT1G43860 | sequence-specific DNA binding transcription factors | 0.81 | 0.3 | -0.3 | |||
7 | AT5G58230 | Transducin/WD40 repeat-like superfamily protein | ARABIDOPSIS MULTICOPY SUPRESSOR OF IRA1, MATERNAL EFFECT EMBRYO ARREST 70, MULTICOPY SUPRESSOR OF IRA1 |
0.81 | 0.31 | -0.3 | ||
8 | AT2G36530 | Enolase | ENOLASE 2, LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2 |
0.81 | 0.34 | -0.32 | ||
9 | AT1G76160 | SKU5 similar 5 | SKU5 similar 5 | 0.8 | 0.34 | -0.32 | ||
10 | AT3G18165 | modifier of snc1,4 | Modifier of snc1,4 | 0.79 | 0.31 | -0.33 | ||
11 | AT3G25545 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.79 | 0.3 | -0.31 | |||
12 | AT1G29150 | non-ATPase subunit 9 | non-ATPase subunit 9, REGULATORY PARTICLE NON-ATPASE 6 |
0.79 | 0.32 | -0.35 | ||
13 | AT3G29360 | UDP-glucose 6-dehydrogenase family protein | UDP-glucose dehydrogenase 2 | 0.79 | 0.29 | -0.33 | ||
14 | AT1G01910 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.79 | 0.33 | -0.32 | |||
15 | AT5G49720 | glycosyl hydrolase 9A1 | glycosyl hydrolase 9A1, DEFECTIVE CYTOKINESIS, glycosyl hydrolase 9A1, IRREGULAR XYLEM 2, KORRIGAN, KORRIGAN 1, RADIALLY SWOLLEN 2, TUMOROUS SHOOT DEVELOPMENT 1 |
0.79 | 0.34 | -0.29 | ||
16 | AT4G19120 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
early-responsive to dehydration 3 | 0.79 | 0.33 | -0.32 | ||
17 | AT3G61240 | DEA(D/H)-box RNA helicase family protein | 0.78 | 0.32 | -0.34 | |||
18 | AT1G30580 | GTP binding | 0.78 | 0.33 | -0.31 | |||
19 | AT5G60920 | COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family |
COBRA | 0.78 | 0.34 | -0.32 | ||
20 | AT1G52730 | Transducin/WD40 repeat-like superfamily protein | 0.78 | 0.32 | -0.34 | |||
21 | AT4G39260 | cold, circadian rhythm, and RNA binding 1 | GLYCINE-RICH PROTEIN 8, cold, circadian rhythm, and RNA binding 1, glycine-rich RNA-binding protein 8, GRP8 |
0.78 | 0.31 | -0.33 | ||
22 | AT1G15740 | Leucine-rich repeat family protein | -0.77 | 0.32 | -0.29 | |||
23 | AT2G35790 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1301 (InterPro:IPR009724); Has 116 Blast hits to 116 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 53; Fungi - 6; Plants - 49; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
0.77 | 0.31 | -0.34 | |||
24 | AT1G14830 | DYNAMIN-like 1C | DYNAMIN-like 1C, ARABIDOPSIS DYNAMIN-LIKE PROTEIN 5, DYNAMIN-like 1C, DYNAMIN RELATED PROTEIN 1C |
0.77 | 0.31 | -0.3 | ||
25 | AT1G19520 | pentatricopeptide (PPR) repeat-containing protein | NUCLEAR FUSION DEFECTIVE 5 | 0.77 | 0.3 | -0.32 | ||
26 | AT1G26580 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: ELM2 domain-containing protein (TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.77 | 0.31 | -0.33 | |||
27 | AT1G03260 | SNARE associated Golgi protein family | 0.77 | 0.32 | -0.3 | |||
28 | AT3G05420 | acyl-CoA binding protein 4 | acyl-CoA binding protein 4 | 0.77 | 0.3 | -0.3 | ||
29 | AT1G26850 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.76 | 0.33 | -0.33 | |||
30 | AT3G19630 | Radical SAM superfamily protein | 0.76 | 0.29 | -0.32 | |||
31 | AT5G18280 | apyrase 2 | apyrase 2, apyrase 2 | 0.76 | 0.34 | -0.31 | ||
32 | AT4G34450 | coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative |
0.76 | 0.32 | -0.32 | |||
33 | AT2G18740 | Small nuclear ribonucleoprotein family protein | 0.76 | 0.32 | -0.32 | |||
34 | AT3G55620 | Translation initiation factor IF6 | eukaryotic initiation facor 6A, embryo defective 1624 |
0.76 | 0.32 | -0.33 | ||
35 | AT1G56330 | secretion-associated RAS 1B | SECRETION-ASSOCIATED RAS 1, secretion-associated RAS 1B, ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS 1B, SECRETION-ASSOCIATED RAS 1, secretion-associated RAS 1B |
0.76 | 0.32 | -0.31 | ||
36 | AT2G47970 | Nuclear pore localisation protein NPL4 | 0.76 | 0.31 | -0.3 | |||
37 | AT3G04830 | Protein prenylyltransferase superfamily protein | 0.75 | 0.33 | -0.31 | |||
38 | AT1G22370 | UDP-glucosyl transferase 85A5 | UDP-glucosyl transferase 85A5, UDP-glucosyl transferase 85A5 |
-0.75 | 0.31 | -0.33 | ||
39 | AT3G15000 | cobalt ion binding | 0.75 | 0.33 | -0.31 | |||
40 | AT2G43770 | Transducin/WD40 repeat-like superfamily protein | 0.75 | 0.3 | -0.3 | |||
41 | AT4G32400 | Mitochondrial substrate carrier family protein | ARABIDOPSIS THALIANA BRITTLE 1, EMBRYO DEFECTIVE 104, EMBRYO DEFECTIVE 42, SODIUM HYPERSENSITIVE 1 |
0.75 | 0.32 | -0.35 | ||
42 | AT5G57370 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1777 (InterPro:IPR013957); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.75 | 0.33 | -0.3 | |||
43 | AT3G12130 | KH domain-containing protein / zinc finger (CCCH type) family protein |
0.75 | 0.33 | -0.3 | |||
44 | AT5G24570 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.75 | 0.3 | -0.3 | |||
45 | AT3G52930 | Aldolase superfamily protein | 0.74 | 0.32 | -0.3 | |||
46 | AT4G00740 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
QUASIMODO 3 | 0.74 | 0.34 | -0.34 | ||
47 | AT4G39990 | RAB GTPase homolog A4B | GTP-BINDING PROTEIN 3, ATRAB11G, ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG A 4B, RAB GTPase homolog A4B |
0.74 | 0.33 | -0.32 | ||
48 | AT5G61780 | TUDOR-SN protein 2 | Arabidopsis thaliana TUDOR-SN protein 2, TUDOR-SN protein 2, TUDOR-SN protein 2 |
0.74 | 0.32 | -0.31 | ||
49 | AT3G51050 | FG-GAP repeat-containing protein | 0.74 | 0.29 | -0.32 | |||
50 | AT5G18520 | Lung seven transmembrane receptor family protein | 0.74 | 0.32 | -0.31 | |||
51 | AT1G73920 | alpha/beta-Hydrolases superfamily protein | -0.74 | 0.31 | -0.33 | |||
52 | AT5G10840 | Endomembrane protein 70 protein family | 0.74 | 0.32 | -0.31 | |||
53 | AT3G44110 | DNAJ homologue 3 | ATJ, DNAJ homologue 3, J3 | 0.74 | 0.32 | -0.32 | ||
54 | AT1G43690 | ubiquitin interaction motif-containing protein | 0.74 | 0.31 | -0.36 | |||
55 | AT2G46170 | Reticulon family protein | 0.74 | 0.34 | -0.3 | |||
56 | AT1G11650 | RNA-binding (RRM/RBD/RNP motifs) family protein | ATRBP45B, RBP45B | 0.74 | 0.3 | -0.3 | ||
57 | AT4G39980 | 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 | 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 |
0.74 | 0.31 | -0.3 | ||
58 | AT3G19980 | flower-specific, phytochrome-associated protein phosphatase 3 |
flower-specific, phytochrome-associated protein phosphatase 3, EMBRYO DEFECTIVE 2736, flower-specific, phytochrome-associated protein phosphatase 3, SERINE/THREONINE PROTEIN PHOSPHATASE |
0.74 | 0.32 | -0.33 | ||
59 | AT1G28510 | Optic atrophy 3 protein (OPA3) | 0.73 | 0.32 | -0.33 | |||
60 | AT1G79550 | phosphoglycerate kinase | phosphoglycerate kinase | 0.73 | 0.31 | -0.34 | ||
61 | AT5G05820 | Nucleotide-sugar transporter family protein | 0.73 | 0.35 | -0.31 | |||
62 | AT4G02570 | cullin 1 | cullin 1, AUXIN RESISTANT 6, cullin 1 |
0.73 | 0.31 | -0.31 | ||
63 | AT5G44110 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
ATP-binding cassette A21, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN, ATPOP1, POP1 |
0.73 | 0.31 | -0.31 | ||
64 | AT4G01320 | Peptidase family M48 family protein | ATSTE24, STE24 | 0.73 | 0.31 | -0.29 | ||
65 | AT3G26890 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41110.1); Has 393 Blast hits to 383 proteins in 134 species: Archae - 0; Bacteria - 61; Metazoa - 171; Fungi - 74; Plants - 80; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
-0.73 | 0.3 | -0.32 | |||
66 | AT3G28200 | Peroxidase superfamily protein | 0.73 | 0.33 | -0.3 | |||
67 | AT3G54400 | Eukaryotic aspartyl protease family protein | 0.73 | 0.3 | -0.33 | |||
68 | AT2G34970 | Trimeric LpxA-like enzyme | 0.73 | 0.32 | -0.32 | |||
69 | AT4G38890 | FMN-linked oxidoreductases superfamily protein | 0.73 | 0.34 | -0.33 | |||
70 | AT4G39920 | C-CAP/cofactor C-like domain-containing protein | PORCINO, TUBULIN-FOLDING COFACTOR C |
0.73 | 0.32 | -0.29 | ||
71 | AT2G25430 | epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related |
0.73 | 0.34 | -0.32 | |||
72 | AT2G36310 | uridine-ribohydrolase 1 | nucleoside hydrolase 1, uridine-ribohydrolase 1 |
0.73 | 0.31 | -0.32 | ||
73 | AT3G11800 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.73 | 0.3 | -0.34 | |||
74 | AT1G22730 | MA3 domain-containing protein | 0.72 | 0.32 | -0.33 | |||
75 | AT4G25280 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.72 | 0.33 | -0.32 | |||
76 | AT1G04750 | vesicle-associated membrane protein 721 | AT VAMP7B, ATVAMP721, vesicle-associated membrane protein 721, VESICLE-ASSOCIATED MEMBRANE PROTEIN 7B |
0.72 | 0.32 | -0.32 | ||
77 | AT1G76270 | O-fucosyltransferase family protein | 0.72 | 0.3 | -0.32 | |||
78 | AT2G30260 | U2 small nuclear ribonucleoprotein B | U2 small nuclear ribonucleoprotein B |
0.72 | 0.32 | -0.32 | ||
79 | AT4G31580 | serine/arginine-rich 22 | RS-containing zinc finger protein 22, RS-containing zinc finger protein 22, RS-CONTAINING ZINC FINGER PROTEIN 22, serine/arginine-rich 22, SRZ22 |
0.72 | 0.3 | -0.29 | ||
80 | AT3G16760 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.72 | 0.32 | -0.31 | |||
81 | AT3G52070 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.72 | 0.32 | -0.31 | |||
82 | AT3G02320 | N2,N2-dimethylguanosine tRNA methyltransferase | 0.72 | 0.32 | -0.32 | |||
83 | AT5G19680 | Leucine-rich repeat (LRR) family protein | 0.72 | 0.33 | -0.33 | |||
84 | AT1G62730 | Terpenoid synthases superfamily protein | 0.72 | 0.33 | -0.3 | |||
85 | AT3G51600 | lipid transfer protein 5 | lipid transfer protein 5 | 0.72 | 0.31 | -0.31 | ||
86 | AT3G07170 | Sterile alpha motif (SAM) domain-containing protein | 0.72 | 0.32 | -0.3 | |||
87 | AT4G20890 | tubulin beta-9 chain | tubulin beta-9 chain | 0.72 | 0.31 | -0.32 | ||
88 | AT5G49540 | Rab5-interacting family protein | 0.72 | 0.31 | -0.31 | |||
89 | AT4G01220 | Nucleotide-diphospho-sugar transferase family protein | male gametophyte defective 4 | 0.72 | 0.3 | -0.32 | ||
90 | AT5G52980 | CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly factor, Vma12 (InterPro:IPR021013); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.72 | 0.29 | -0.32 | |||
91 | AT5G05920 | deoxyhypusine synthase | deoxyhypusine synthase, embryo sac development arrest 22 |
0.72 | 0.31 | -0.32 | ||
92 | AT4G31080 | Protein of unknown function (DUF2296) | 0.72 | 0.33 | -0.31 | |||
93 | AT5G16490 | ROP-interactive CRIB motif-containing protein 4 | ROP-interactive CRIB motif-containing protein 4 |
-0.7 | 0.31 | -0.32 | ||
94 | AT1G63740 | Disease resistance protein (TIR-NBS-LRR class) family | -0.7 | 0.32 | -0.3 | |||
95 | AT5G47720 | Thiolase family protein | -0.7 | 0.31 | -0.32 | |||
96 | AT2G15440 | Protein of unknown function (DUF579) | -0.7 | 0.31 | -0.31 | |||
97 | AT4G13810 | receptor like protein 47 | receptor like protein 47, receptor like protein 47 |
-0.68 | 0.32 | -0.35 | ||
98 | AT2G25690 | Protein of unknown function (DUF581) | -0.67 | 0.31 | -0.32 | |||
99 | AT4G01280 | Homeodomain-like superfamily protein | -0.67 | 0.33 | -0.3 | |||
100 | AT5G11780 | unknown protein; Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.66 | 0.32 | -0.34 | |||
101 | AT1G78130 | Major facilitator superfamily protein | unfertilized embryo sac 2 | -0.66 | 0.31 | -0.32 | ||
102 | AT5G49500 | Signal recognition particle, SRP54 subunit protein | -0.65 | 0.31 | -0.3 | |||
103 | AT3G16700 | Fumarylacetoacetate (FAA) hydrolase family | -0.65 | 0.31 | -0.3 | |||
104 | AT3G01320 | SIN3-like 1 | SIN3-like 1 | -0.65 | 0.32 | -0.33 | ||
105 | AT5G42370 | Calcineurin-like metallo-phosphoesterase superfamily protein |
-0.65 | 0.31 | -0.31 | |||
106 | AT3G46910 | Cullin family protein | -0.64 | 0.32 | -0.32 | |||
107 | AT2G02350 | SKP1 interacting partner 3 | Phloem protein 2-B9, SKP1 interacting partner 3 |
-0.64 | 0.31 | -0.3 | ||
108 | AT1G54230 | Winged helix-turn-helix transcription repressor DNA-binding | -0.64 | 0.29 | -0.31 | |||
109 | AT5G58120 | Disease resistance protein (TIR-NBS-LRR class) family | -0.63 | 0.3 | -0.31 | |||
110 | AT5G27950 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.62 | 0.31 | -0.32 | |||
111 | AT5G52460 | FBD, F-box and Leucine Rich Repeat domains containing protein |
embryo sac development arrest 41 | -0.62 | 0.29 | -0.33 | ||
112 | AT4G08160 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
-0.61 | 0.3 | -0.33 | |||
113 | AT3G24010 | RING/FYVE/PHD zinc finger superfamily protein | ARABIDOPSIS THALIANA INHIBITOR OF GROWTH 1, INHIBITOR OF GROWTH 1 |
-0.61 | 0.29 | -0.32 | ||
114 | AT5G52880 | F-box family protein | -0.61 | 0.31 | -0.31 | |||
115 | AT2G22310 | ubiquitin-specific protease 4 | ubiquitin-specific protease 4, ubiquitin-specific protease 4 |
-0.61 | 0.32 | -0.31 | ||
116 | AT1G12730 | GPI transamidase subunit PIG-U | -0.61 | 0.34 | -0.31 | |||
117 | AT5G24750 | UDP-Glycosyltransferase superfamily protein | -0.61 | 0.32 | -0.31 | |||
118 | AT3G57980 | DNA-binding bromodomain-containing protein | -0.6 | 0.31 | -0.32 | |||
119 | AT1G21430 | Flavin-binding monooxygenase family protein | YUC11 | -0.6 | 0.33 | -0.33 | ||
120 | AT3G45420 | Concanavalin A-like lectin protein kinase family protein | -0.59 | 0.33 | -0.33 | |||
121 | AT5G66670 | Protein of unknown function (DUF677) | -0.59 | 0.32 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
122 | C0110 | Guanosine | - | Guanosine | guanosine nucleotides degradation I, guanine and guanosine salvage II, guanosine nucleotides degradation II, guanine and guanosine salvage III |
0.73 | 0.45 | -0.45 | ||
123 | C0097 | Glucosamine-6-phosphate | D-Glucosamine-6-phosphate | D-Glucosamine-6-phosphate | UDP-N-acetyl-D-glucosamine biosynthesis II | -0.66 | 0.31 | -0.32 |