AGICode | AT3G51110 |
Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G51110 | Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | 0.33 | -0.32 | |||
2 | AT3G10020 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 47 Blast hits to 47 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.68 | 0.31 | -0.34 | |||
3 | AT3G62980 | F-box/RNI-like superfamily protein | AtTIR1, TRANSPORT INHIBITOR RESPONSE 1 |
0.67 | 0.33 | -0.31 | ||
4 | AT5G60680 | Protein of unknown function, DUF584 | 0.66 | 0.31 | -0.32 | |||
5 | AT3G19380 | plant U-box 25 | plant U-box 25 | 0.65 | 0.31 | -0.33 | ||
6 | AT4G35770 | Rhodanese/Cell cycle control phosphatase superfamily protein |
ARABIDOPSIS THALIANA SENESCENCE 1, DARK INDUCIBLE 1, SENESCENCE 1, SENESCENCE ASSOCIATED GENE 1 |
0.65 | 0.31 | -0.32 | ||
7 | AT2G15890 | maternal effect embryo arrest 14 | maternal effect embryo arrest 14 | 0.65 | 0.32 | -0.31 | ||
8 | AT1G32700 | PLATZ transcription factor family protein | 0.65 | 0.33 | -0.32 | |||
9 | AT1G03090 | methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) |
MCCA | 0.64 | 0.32 | -0.33 | ||
10 | AT2G21240 | basic pentacysteine 4 | BASIC PENTACYSTEINE 4, BBR, basic pentacysteine 4 |
0.63 | 0.32 | -0.31 | ||
11 | AT2G26430 | arginine-rich cyclin 1 | ARGININE-RICH CYCLIN 1, arginine-rich cyclin 1 |
0.63 | 0.32 | -0.3 | ||
12 | AT3G01700 | arabinogalactan protein 11 | arabinogalactan protein 11, ARABINOGALACTAN PROTEIN 11 |
-0.63 | 0.31 | -0.33 | ||
13 | AT5G10860 | Cystathionine beta-synthase (CBS) family protein | CBS domain containing protein 3 | 0.63 | 0.29 | -0.31 | ||
14 | AT2G35860 | FASCICLIN-like arabinogalactan protein 16 precursor | FASCICLIN-like arabinogalactan protein 16 precursor |
-0.63 | 0.31 | -0.31 | ||
15 | AT4G14270 | Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins. |
0.63 | 0.3 | -0.3 | |||
16 | AT4G13980 | winged-helix DNA-binding transcription factor family protein |
AT-HSFA5, HEAT SHOCK TRANSCRIPTION FACTOR A5 |
0.62 | 0.33 | -0.3 | ||
17 | AT3G20310 | ethylene response factor 7 | ATERF-7, ATERF7, ethylene response factor 7 |
0.62 | 0.33 | -0.31 | ||
18 | AT1G21680 | DPP6 N-terminal domain-like protein | 0.62 | 0.33 | -0.31 | |||
19 | AT1G62960 | ACC synthase 10 | ACC synthase 10 | -0.61 | 0.3 | -0.31 | ||
20 | AT5G14620 | domains rearranged methyltransferase 2 | DMT7, domains rearranged methyltransferase 2 |
0.61 | 0.33 | -0.33 | ||
21 | AT5G24610 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.6 | 0.33 | -0.3 | |||
22 | AT1G72500 | LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: inter-alpha-trypsin inhibitor heavy chain-related (TAIR:AT1G19110.1); Has 1407 Blast hits to 1406 proteins in 307 species: Archae - 6; Bacteria - 522; Metazoa - 484; Fungi - 59; Plants - 110; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink). |
-0.6 | 0.32 | -0.31 | |||
23 | AT1G61930 | Protein of unknown function, DUF584 | -0.59 | 0.3 | -0.29 | |||
24 | AT3G11730 | Ras-related small GTP-binding family protein | ATFP8, ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG D1, RAB GTPASE HOMOLOG D1 |
0.59 | 0.32 | -0.32 | ||
25 | AT5G34790 | transposable element gene | -0.58 | 0.3 | -0.33 | |||
26 | AT5G42320 | Zn-dependent exopeptidases superfamily protein | -0.58 | 0.31 | -0.32 | |||
27 | AT1G04310 | ethylene response sensor 2 | ethylene response sensor 2 | 0.58 | 0.3 | -0.31 | ||
28 | AT1G55910 | zinc transporter 11 precursor | zinc transporter 11 precursor | -0.58 | 0.32 | -0.31 | ||
29 | AT3G47630 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325 Blast hits to 325 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). |
0.58 | 0.34 | -0.32 | |||
30 | AT5G28230 | pseudogene, similar to glucose-6-phosphate/phosphate-translocator precursor, contains similarity to glucose-6-phosphate/phosphate-translocator precursors; blastp match of 78% identity and 1.6e-75 P-value to GP|2997591|gb|AAC08525.1||AF020814 glucose-6-phosphate/phosphate-translocator precursor {Pisum sativum} |
-0.58 | 0.32 | -0.33 | |||
31 | AT2G32400 | glutamate receptor 5 | ATGLR3.7, GLUTAMATE RECEPTOR 3.7, glutamate receptor 5 |
-0.58 | 0.3 | -0.31 | ||
32 | AT3G62130 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
L-cysteine desulfhydrase | 0.58 | 0.33 | -0.32 | ||
33 | AT5G14670 | ADP-ribosylation factor A1B | ADP-ribosylation factor A1B, ADP-ribosylation factor A1B |
-0.57 | 0.33 | -0.29 | ||
34 | AT4G23200 | cysteine-rich RLK (RECEPTOR-like protein kinase) 12 | cysteine-rich RLK (RECEPTOR-like protein kinase) 12 |
-0.57 | 0.31 | -0.33 | ||
35 | AT5G07770 | Actin-binding FH2 protein | -0.57 | 0.32 | -0.32 | |||
36 | AT5G55350 | MBOAT (membrane bound O-acyl transferase) family protein | 0.57 | 0.29 | -0.3 | |||
37 | AT5G63190 | MA3 domain-containing protein | 0.57 | 0.34 | -0.31 | |||
38 | AT5G65140 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
trehalose-6-phosphate phosphatase J |
0.57 | 0.31 | -0.31 | ||
39 | AT3G12120 | fatty acid desaturase 2 | fatty acid desaturase 2 | 0.57 | 0.3 | -0.29 | ||
40 | AT2G04070 | MATE efflux family protein | -0.57 | 0.31 | -0.29 | |||
41 | AT1G64210 | Leucine-rich repeat protein kinase family protein | 0.57 | 0.29 | -0.31 | |||
42 | AT3G52370 | FASCICLIN-like arabinogalactan protein 15 precursor | FASCICLIN-like arabinogalactan protein 15 precursor |
-0.56 | 0.3 | -0.32 | ||
43 | AT1G13450 | Homeodomain-like superfamily protein | GT-1 | 0.56 | 0.3 | -0.31 | ||
44 | AT5G02990 | Galactose oxidase/kelch repeat superfamily protein | -0.56 | 0.33 | -0.3 | |||
45 | AT5G11920 | 6-&1-fructan exohydrolase | 6-&1-fructan exohydrolase, 6-&1-fructan exohydrolase |
-0.56 | 0.3 | -0.29 | ||
46 | AT2G05610 | transposable element gene | -0.56 | 0.3 | -0.33 | |||
47 | AT5G32600 | transposable element gene | -0.55 | 0.32 | -0.32 | |||
48 | AT5G57655 | xylose isomerase family protein | 0.55 | 0.31 | -0.32 | |||
49 | AT5G64110 | Peroxidase superfamily protein | 0.55 | 0.3 | -0.33 | |||
50 | AT2G24450 | FASCICLIN-like arabinogalactan protein 3 precursor | FASCICLIN-like arabinogalactan protein 3 precursor |
-0.54 | 0.31 | -0.33 | ||
51 | AT3G47610 | transcription regulators;zinc ion binding | 0.54 | 0.29 | -0.3 | |||
52 | AT3G57960 | Emsy N Terminus (ENT) domain-containing protein | -0.54 | 0.31 | -0.33 | |||
53 | AT5G16300 | Vps51/Vps67 family (components of vesicular transport) protein |
-0.53 | 0.31 | -0.32 | |||
54 | AT2G33320 | Calcium-dependent lipid-binding (CaLB domain) family protein |
-0.52 | 0.31 | -0.3 | |||
55 | AT5G28820 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.52 | 0.33 | -0.32 | |||
56 | AT1G60630 | Leucine-rich repeat protein kinase family protein | -0.52 | 0.31 | -0.34 | |||
57 | AT5G55090 | mitogen-activated protein kinase kinase kinase 15 | mitogen-activated protein kinase kinase kinase 15 |
-0.52 | 0.33 | -0.3 | ||
58 | AT1G57570 | Mannose-binding lectin superfamily protein | -0.51 | 0.31 | -0.33 | |||
59 | AT1G08960 | cation exchanger 11 | CATION EXCHANGER 11, Arabidopsis thaliana cation calcium exchanger 5, cation exchanger 11, cation calcium exchanger 5 |
-0.51 | 0.32 | -0.34 | ||
60 | AT2G33690 | Late embryogenesis abundant protein, group 6 | -0.51 | 0.32 | -0.3 | |||
61 | AT5G20450 | CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.2); Has 1723 Blast hits to 1458 proteins in 355 species: Archae - 28; Bacteria - 353; Metazoa - 453; Fungi - 121; Plants - 353; Viruses - 3; Other Eukaryotes - 412 (source: NCBI BLink). |
-0.51 | 0.33 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
62 | C0056 | AMP | - | AMP | PRPP biosynthesis I, fatty acid biosynthesis (plant mitochondria), adenine and adenosine salvage VI, biotin-carboxyl carrier protein assembly, molybdenum cofactor biosynthesis II (eukaryotes), gluconeogenesis I, adenine and adenosine salvage II, asparagine biosynthesis I, L-glutamine biosynthesis II (tRNA-dependent), trans-cinnamoyl-CoA biosynthesis, IAA degradation V, ethanol degradation II (cytosol), arginine biosynthesis I, IAA degradation IV, fatty acid activation, selenate reduction, IAA biosynthesis VII, 4-hydroxybenzoate biosynthesis V, tetrapyrrole biosynthesis I, flavonoid biosynthesis, indole-3-acetyl-amino acid biosynthesis, glutamine biosynthesis III, ethanol degradation IV (peroxisomal), glycolysis I, asparagine biosynthesis III (tRNA-dependent), jasmonoyl-amino acid conjugates biosynthesis I, molybdenum cofactor biosynthesis, pyridine nucleotide cycling (plants), scopoletin biosynthesis, jasmonic acid biosynthesis, adenosine nucleotides degradation I, fatty acid beta-oxidation II (core pathway), simple coumarins biosynthesis, sulfate reduction II (assimilatory), pantothenate biosynthesis, sporopollenin precursor biosynthesis, urea cycle, thiamine biosynthesis II, starch degradation II, NAD biosynthesis I (from aspartate), citrulline-nitric oxide cycle, beta-alanine biosynthesis II, arginine biosynthesis II (acetyl cycle), suberin biosynthesis, linoleate biosynthesis I (plants), trans-zeatin biosynthesis, tetrahydrofolate biosynthesis II, purine nucleotides de novo biosynthesis II, phenylpropanoid biosynthesis, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I, purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging |
0.73 | 0.46 | -0.46 | ||
63 | C0073 | Cysteine | L-Cysteine | L-Cysteine | alanine biosynthesis III, cysteine biosynthesis I, gamma-glutamyl cycle (plant pathway), farnesylcysteine salvage pathway, molybdenum cofactor biosynthesis, thiamine biosynthesis II, cyanide detoxification II, indole glucosinolate breakdown (insect chewing induced), glutathione degradation, glutathione biosynthesis, molybdenum cofactor biosynthesis II (eukaryotes), cyanide degradation, homocysteine and cysteine interconversion, methionine biosynthesis II, tRNA charging, gamma-glutamyl cycle, coenzyme A biosynthesis |
0.72 | 0.44 | -0.46 | ||
64 | C0011 | N-Acetyl-glutamic acid | N-Acetyl-D,L-glutamic acid | N-Acetyl-L-glutamate | arginine biosynthesis II (acetyl cycle), ornithine biosynthesis |
0.67 | 0.41 | -0.45 |