AT3G49000 : -
Query Information
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AGICode AT3G49000
Description RNA polymerase III subunit RPC82 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G49000 RNA polymerase III subunit RPC82 family protein 1 0.33 -0.32
2 AT1G01220 L-fucokinase/GDP-L-fucose pyrophosphorylase Arabidopsis thaliana
L-fucokinase/GDP-L-fucose
pyrophosphorylase,
L-fucokinase/GDP-L-fucose
pyrophosphorylase		 0.75 0.33 -0.31
3 AT5G63450 cytochrome P450, family 94, subfamily B, polypeptide 1 cytochrome P450, family 94,
subfamily B, polypeptide 1		 -0.75 0.31 -0.35
4 AT2G28050 Pentatricopeptide repeat (PPR) superfamily protein 0.75 0.33 -0.32
5 AT2G31660 ARM repeat superfamily protein enhanced miRNA activity 1, SUPER
SENSITIVE TO ABA AND DROUGHT2,
UNARMED 9		 0.72 0.31 -0.3
6 AT2G38090 Duplicated homeodomain-like superfamily protein 0.72 0.32 -0.31
7 AT1G12020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits
to 88 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.71 0.31 -0.34
8 AT4G28085 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.7 0.32 -0.28
9 AT4G02680 ETO1-like 1 ETO1-like 1 0.7 0.32 -0.33
10 AT5G11890 FUNCTIONS IN: molecular_function unknown; LOCATED IN:
plasma membrane; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: Late embryogenesis abundant
(LEA) hydroxyproline-rich glycoprotein family
(TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 EMBRYO DEFECTIVE 3135 0.69 0.32 -0.33
11 AT2G12320 transposable element gene 0.69 0.3 -0.31
12 AT4G17960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G46620.1); Has 46 Blast hits
to 45 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.3 -0.33
13 AT4G14170 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.31 -0.33
14 AT4G36900 related to AP2 10 DREB AND EAR MOTIF PROTEIN 4,
related to AP2 10		 -0.68 0.32 -0.31
15 AT1G69260 ABI five binding protein ABI five binding protein -0.68 0.33 -0.3
16 AT2G18750 Calmodulin-binding protein -0.68 0.32 -0.3
17 AT5G17510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.68 0.31 -0.31
18 AT1G28530 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 10 growth stages; Has 20 Blast hits to 20
proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.68 0.33 -0.32
19 AT3G56870 unknown protein; Has 204 Blast hits to 201 proteins in 58
species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi -
8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source:
NCBI BLink).		 0.67 0.31 -0.33
20 AT5G50390 Pentatricopeptide repeat (PPR-like) superfamily protein EMBRYO DEFECTIVE 3141 0.67 0.33 -0.32
21 AT4G15890 binding 0.67 0.31 -0.33
22 AT4G24400 CBL-interacting protein kinase 8 ATCIPK8, CBL-interacting protein
kinase 8, PROTEIN KINASE 11,
SNF1-RELATED PROTEIN KINASE 3.13		 -0.67 0.31 -0.32
23 AT4G16970 Protein kinase superfamily protein 0.67 0.33 -0.29
24 AT5G66050 Wound-responsive family protein -0.67 0.3 -0.33
25 AT1G60750 NAD(P)-linked oxidoreductase superfamily protein -0.66 0.33 -0.3
26 AT3G46230 heat shock protein 17.4 ARABIDOPSIS THALIANA HEAT SHOCK
PROTEIN 17.4, heat shock protein
17.4		 -0.66 0.31 -0.3
27 AT1G20230 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.34 -0.3
28 AT1G53300 tetratricopetide-repeat thioredoxin-like 1 tetratricopetide-repeat
thioredoxin-like 1		 0.66 0.3 -0.32
29 AT3G10540 3-phosphoinositide-dependent protein kinase 0.66 0.31 -0.31
30 AT3G10600 cationic amino acid transporter 7 cationic amino acid transporter 7 0.66 0.29 -0.29
31 AT4G17610 tRNA/rRNA methyltransferase (SpoU) family protein 0.65 0.33 -0.31
32 AT3G12690 AGC kinase 1.5 AGC kinase 1.5 0.65 0.3 -0.34
33 AT3G24320 MUTL protein homolog 1 ATMSH1, CHLOROPLAST MUTATOR, CHM1,
MUTL protein homolog 1		 0.65 0.31 -0.31
34 AT1G74740 calcium-dependent protein kinase 30 ATCPK30, CALCIUM-DEPENDENT PROTEIN
KINASE 1A, calcium-dependent
protein kinase 30		 -0.65 0.31 -0.32
35 AT5G39960 GTP binding;GTP binding 0.65 0.31 -0.35
36 AT2G39910 ARM repeat superfamily protein 0.65 0.3 -0.33
37 AT5G64010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 34
Blast hits to 34 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.33
38 AT4G00280 BEST Arabidopsis thaliana protein match is: Leucine-rich
repeat transmembrane protein kinase protein
(TAIR:AT2G19210.1); Has 19 Blast hits to 19 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.32 -0.31
39 AT3G19740 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.65 0.34 -0.32
40 AT1G50340 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.65 0.32 -0.32
41 AT4G13160 Protein of unknown function, DUF593 -0.64 0.31 -0.36
42 AT1G52360 Coatomer, beta' subunit 0.64 0.29 -0.32
43 AT4G22970 homolog of separase homolog of separase, homolog of
separase, SEPARASE, RADIALLY
SWOLLEN 4		 0.64 0.33 -0.31
44 AT3G07360 plant U-box 9 ARABIDOPSIS THALIANA PLANT U-BOX
9, plant U-box 9		 -0.64 0.33 -0.32
45 AT2G04370 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.27 -0.31
46 AT2G06230 transposable element gene 0.64 0.33 -0.33
47 AT5G17080 Cysteine proteinases superfamily protein 0.64 0.32 -0.3
48 AT1G50630 Protein of unknown function (DUF3537) -0.63 0.32 -0.31
49 AT1G58270 TRAF-like family protein ZW9 -0.63 0.3 -0.3
50 AT2G26620 Pectin lyase-like superfamily protein -0.63 0.33 -0.31
51 AT2G37440 DNAse I-like superfamily protein -0.63 0.31 -0.31
52 AT2G32510 mitogen-activated protein kinase kinase kinase 17 mitogen-activated protein kinase
kinase kinase 17		 -0.63 0.31 -0.31
53 AT1G31260 zinc transporter 10 precursor zinc transporter 10 precursor -0.62 0.33 -0.3
54 AT1G55640 prenylated RAB acceptor 1.G1 prenylated RAB acceptor 1.G1 0.62 0.32 -0.31
55 AT5G23640 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.62 0.33 -0.3
56 AT5G26630 MADS-box transcription factor family protein -0.62 0.32 -0.31
57 AT1G73930 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1630 (InterPro:IPR012860); Has 290
Blast hits to 263 proteins in 104 species: Archae - 0;
Bacteria - 0; Metazoa - 148; Fungi - 30; Plants - 49;
Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).		 0.62 0.33 -0.31
58 AT3G17110 pseudogene, glycine-rich protein -0.61 0.31 -0.29
59 AT2G19510 LOB domain-containing protein 8 LOB domain-containing protein 8 -0.61 0.3 -0.34
60 AT5G52360 actin depolymerizing factor 10 actin depolymerizing factor 10 -0.61 0.32 -0.33
61 AT5G04000 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.6 0.3 -0.3
62 AT5G19490 Histone superfamily protein -0.6 0.31 -0.31
63 AT1G41810 transposable element gene -0.6 0.32 -0.3
64 AT5G23220 nicotinamidase 3 nicotinamidase 3 -0.6 0.35 -0.32
65 AT1G02550 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.59 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
66 C0124 Isonicotinic acid - - - 0.71 0.44 -0.47
67 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.65 0.47 -0.43 C0091
68 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		-0.64 0.45 -0.45 C0053
69 C0147 Mannose D-Mannose D-Mannose mannose degradation,
mannitol degradation II 		-0.62 0.31 -0.33 C0147
70 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) -0.59 0.45 -0.49 C0075