AGICode | AT3G44210 |
Description | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43870.1); Has 15 Blast hits to 15 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G44210 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43870.1); Has 15 Blast hits to 15 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.3 | -0.32 | |||
2 | AT5G34900 | transposable element gene | 0.78 | 0.33 | -0.3 | |||
3 | AT4G19000 | Transcription elongation factor (TFIIS) family protein | ARABIDOPSIS THALIANA IWS2 (FROM YEAST INTERACTS WITH SPT6), IWS2 |
0.77 | 0.32 | -0.31 | ||
4 | AT5G38260 | Protein kinase superfamily protein | 0.76 | 0.31 | -0.34 | |||
5 | AT2G27380 | extensin proline-rich 1 | extensin proline-rich 1, extensin proline-rich 1 |
0.75 | 0.32 | -0.3 | ||
6 | AT5G52850 | Pentatricopeptide repeat (PPR) superfamily protein | 0.74 | 0.31 | -0.31 | |||
7 | AT3G16890 | pentatricopeptide (PPR) domain protein 40 | pentatricopeptide (PPR) domain protein 40 |
0.73 | 0.33 | -0.3 | ||
8 | AT5G09370 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.73 | 0.31 | -0.32 | |||
9 | AT2G30090 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | 0.73 | 0.31 | -0.3 | |||
10 | AT5G28590 | DNA-binding family protein | 0.72 | 0.31 | -0.31 | |||
11 | ATMG00820 | Reverse transcriptase (RNA-dependent DNA polymerase) | ORF170 | 0.72 | 0.32 | -0.31 | ||
12 | AT3G46960 | RNA helicase, ATP-dependent, SK12/DOB1 protein | 0.72 | 0.31 | -0.3 | |||
13 | AT3G42700 | transposable element gene | 0.71 | 0.31 | -0.31 | |||
14 | AT5G42400 | SET domain protein 25 | ARABIDOPSIS TRITHORAX-RELATED7, SET domain protein 25 |
0.71 | 0.3 | -0.31 | ||
15 | AT5G46310 | WRKY family transcription factor | 0.71 | 0.32 | -0.31 | |||
16 | AT1G54790 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.71 | 0.31 | -0.32 | |||
17 | AT2G34400 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.71 | 0.32 | -0.3 | |||
18 | AT4G28395 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
ANTHER 7, ARABIDOPSIS THALIANA ANTHER 7 |
0.71 | 0.31 | -0.29 | ||
19 | AT2G02515 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: central cell, embryo; EXPRESSED DURING: C globular stage; Has 18 Blast hits to 17 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.71 | 0.32 | -0.31 | |||
20 | AT3G18900 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT5G66600.3). |
0.71 | 0.32 | -0.31 | |||
21 | AT4G09100 | RING/U-box superfamily protein | 0.7 | 0.31 | -0.32 | |||
22 | AT4G30590 | early nodulin-like protein 12 | AtENODL12, early nodulin-like protein 12 |
0.7 | 0.32 | -0.35 | ||
23 | AT3G11460 | Pentatricopeptide repeat (PPR) superfamily protein | 0.7 | 0.3 | -0.31 | |||
24 | AT1G74220 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast hits to 347 proteins in 86 species: Archae - 0; Bacteria - 17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2; Other Eukaryotes - 136 (source: NCBI BLink). |
-0.7 | 0.31 | -0.32 | |||
25 | AT2G29780 | Galactose oxidase/kelch repeat superfamily protein | 0.7 | 0.31 | -0.32 | |||
26 | AT5G06839 | bZIP transcription factor family protein | bZIP65, TGACG (TGA) motif-binding protein 10 |
0.7 | 0.32 | -0.31 | ||
27 | AT5G59590 | UDP-glucosyl transferase 76E2 | UDP-glucosyl transferase 76E2 | 0.69 | 0.33 | -0.31 | ||
28 | AT5G53460 | NADH-dependent glutamate synthase 1 | NADH-dependent glutamate synthase 1 |
0.68 | 0.32 | -0.32 | ||
29 | AT3G42350 | transposable element gene | 0.68 | 0.31 | -0.3 | |||
30 | AT4G08740 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.3 | -0.32 | |||
31 | AT2G44260 | Plant protein of unknown function (DUF946) | -0.67 | 0.32 | -0.31 | |||
32 | AT2G05900 | SET domain protein 11 | SET domain protein 11, SU(VAR)3-9 HOMOLOG 10 |
0.67 | 0.28 | -0.33 | ||
33 | AT1G79950 | RAD3-like DNA-binding helicase protein | 0.67 | 0.32 | -0.32 | |||
34 | AT4G16280 | RNA binding;abscisic acid binding | FCA | 0.67 | 0.32 | -0.32 | ||
35 | AT3G05960 | sugar transporter 6 | SUGAR TRANSPORTER 6, sugar transporter 6 |
0.67 | 0.31 | -0.32 | ||
36 | AT5G13380 | Auxin-responsive GH3 family protein | 0.67 | 0.3 | -0.32 | |||
37 | AT1G27820 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.67 | 0.31 | -0.32 | |||
38 | AT2G29770 | Galactose oxidase/kelch repeat superfamily protein | 0.67 | 0.32 | -0.29 | |||
39 | AT3G17290 | transposable element gene | 0.66 | 0.31 | -0.32 | |||
40 | AT5G44510 | target of AVRB operation1 | target of AVRB operation1 | 0.66 | 0.3 | -0.32 | ||
41 | AT2G13550 | unknown protein; Has 23 Blast hits to 20 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
0.66 | 0.32 | -0.31 | |||
42 | AT3G55160 | unknown protein; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2428, death-receptor-like (InterPro:IPR019442); Has 357 Blast hits to 330 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). |
0.66 | 0.31 | -0.3 | |||
43 | AT1G76290 | AMP-dependent synthetase and ligase family protein | 0.66 | 0.33 | -0.32 | |||
44 | AT2G13230 | transposable element gene | -0.66 | 0.32 | -0.31 | |||
45 | AT5G40645 | RPM1-interacting protein 4 (RIN4) family protein | 0.65 | 0.31 | -0.33 | |||
46 | AT2G16970 | Major facilitator superfamily protein | maternal effect embryo arrest 15 | 0.65 | 0.33 | -0.3 | ||
47 | AT2G04032 | zinc transporter 7 precursor | zinc transporter 7 precursor | -0.65 | 0.3 | -0.31 | ||
48 | AT1G32810 | RING/FYVE/PHD zinc finger superfamily protein | 0.65 | 0.32 | -0.31 | |||
49 | AT5G56480 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.65 | 0.32 | -0.32 | |||
50 | AT3G14880 | BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 560 Blast hits to 560 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 558; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.64 | 0.32 | -0.27 | |||
51 | AT1G48330 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits to 40 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.3 | -0.3 | |||
52 | AT5G40280 | Prenyltransferase family protein | ARABIDOPSIS THALIANA FARNESYL TRANSFERASE BETA SUBUNIT, ENHANCED RESPONSE TO ABA 1, WIGGUM |
-0.64 | 0.29 | -0.32 | ||
53 | AT5G25820 | Exostosin family protein | 0.64 | 0.33 | -0.34 | |||
54 | AT2G23480 | transposable element gene | -0.64 | 0.32 | -0.31 | |||
55 | AT1G24010 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
0.64 | 0.33 | -0.31 | |||
56 | AT4G33870 | Peroxidase superfamily protein | 0.64 | 0.31 | -0.3 | |||
57 | AT1G09230 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.64 | 0.32 | -0.32 | |||
58 | AT1G68360 | C2H2 and C2HC zinc fingers superfamily protein | -0.64 | 0.33 | -0.31 | |||
59 | AT3G21550 | DUF679 domain membrane protein 2 | Arabidopsis thaliana DUF679 domain membrane protein 2, DUF679 domain membrane protein 2 |
-0.64 | 0.31 | -0.31 | ||
60 | AT1G76710 | SET domain group 26 | ASH1 RELATED PROTEIN 1, ASH1-RELATED PROTEIN 1, SET domain group 26 |
0.64 | 0.31 | -0.34 | ||
61 | AT4G24880 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.63 | 0.33 | -0.31 | |||
62 | AT3G28260 | unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink). |
0.63 | 0.32 | -0.34 | |||
63 | AT4G28370 | RING/U-box superfamily protein | 0.63 | 0.34 | -0.3 | |||
64 | AT1G63560 | Receptor-like protein kinase-related family protein | 0.63 | 0.31 | -0.31 | |||
65 | AT1G63190 | Cystatin/monellin superfamily protein | 0.63 | 0.31 | -0.31 | |||
66 | AT4G38000 | DNA binding with one finger 4.7 | DNA binding with one finger 4.7 | 0.63 | 0.31 | -0.3 | ||
67 | AT5G05320 | FAD/NAD(P)-binding oxidoreductase family protein | 0.63 | 0.32 | -0.33 | |||
68 | AT1G06760 | winged-helix DNA-binding transcription factor family protein |
-0.63 | 0.33 | -0.32 | |||
69 | AT5G49790 | transposable element gene | -0.62 | 0.31 | -0.31 | |||
70 | AT3G13130 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; Has 140 Blast hits to 132 proteins in 41 species: Archae - 2; Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). |
-0.62 | 0.3 | -0.31 | |||
71 | AT1G62070 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 8 Blast hits to 8 proteins in 4 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.33 | -0.32 | |||
72 | AT5G59910 | Histone superfamily protein | HTB4 | -0.62 | 0.33 | -0.33 | ||
73 | AT3G21660 | UBX domain-containing protein | -0.61 | 0.31 | -0.32 | |||
74 | AT1G27600 | Nucleotide-diphospho-sugar transferases superfamily protein | IRREGULAR XYLEM 9 Homolog, IRREGULAR XYLEM 9-LIKE |
-0.61 | 0.29 | -0.34 | ||
75 | AT1G21510 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon; Has 380 Blast hits to 286 proteins in 63 species: Archae - 0; Bacteria - 6; Metazoa - 254; Fungi - 44; Plants - 13; Viruses - 5; Other Eukaryotes - 58 (source: NCBI BLink). |
-0.6 | 0.31 | -0.3 | |||
76 | AT3G45500 | BEST Arabidopsis thaliana protein match is: RING/U-box protein with C6HC-type zinc finger (TAIR:AT3G45580.1); Has 48 Blast hits to 46 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.31 | -0.3 | |||
77 | AT2G04340 | unknown protein; Has 24 Blast hits to 24 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.32 | -0.33 | |||
78 | AT2G37070 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53320.1); Has 1323 Blast hits to 775 proteins in 176 species: Archae - 0; Bacteria - 113; Metazoa - 351; Fungi - 175; Plants - 115; Viruses - 13; Other Eukaryotes - 556 (source: NCBI BLink). |
-0.59 | 0.32 | -0.32 | |||
79 | AT3G18170 | Glycosyltransferase family 61 protein | -0.59 | 0.3 | -0.32 | |||
80 | AT3G16920 | chitinase-like protein 2 | ATCTL2, chitinase-like protein 2 | -0.58 | 0.31 | -0.32 | ||
81 | AT4G17690 | Peroxidase superfamily protein | -0.58 | 0.33 | -0.3 | |||
82 | AT2G01700 | transposable element gene | -0.58 | 0.31 | -0.33 | |||
83 | AT5G45220 | Disease resistance protein (TIR-NBS-LRR class) family | -0.58 | 0.33 | -0.29 | |||
84 | AT1G16330 | cyclin b3;1 | cyclin b3;1 | -0.58 | 0.3 | -0.29 | ||
85 | AT1G04650 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.57 | 0.32 | -0.31 | |||
86 | AT2G04000 | transposable element gene | -0.57 | 0.3 | -0.32 | |||
87 | AT5G05080 | ubiquitin-conjugating enzyme 22 | ATUBC22, ubiquitin-conjugating enzyme 22 |
-0.57 | 0.3 | -0.32 | ||
88 | AT3G03400 | EF hand calcium-binding protein family | -0.57 | 0.3 | -0.31 | |||
89 | AT2G24000 | serine carboxypeptidase-like 22 | serine carboxypeptidase-like 22 | -0.57 | 0.31 | -0.32 | ||
90 | AT3G57860 | UV-B-insensitive 4-like | GIGAS CELL 1, OMISSION OF SECOND DIVISION, UV-B-insensitive 4-like |
-0.57 | 0.3 | -0.31 | ||
91 | AT4G29340 | profilin 4 | profilin 4 | -0.56 | 0.31 | -0.31 | ||
92 | AT5G48670 | AGAMOUS-like 80 | AGAMOUS-like 80, FEM111 | -0.56 | 0.3 | -0.32 | ||
93 | AT2G43270 | F-box and associated interaction domains-containing protein | -0.56 | 0.3 | -0.31 | |||
94 | AT2G06840 | transposable element gene | -0.55 | 0.32 | -0.31 | |||
95 | AT2G28940 | Protein kinase superfamily protein | -0.55 | 0.3 | -0.32 | |||
96 | AT1G35210 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22470.1); Has 83 Blast hits to 83 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.55 | 0.33 | -0.29 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
97 | C0018 | sn-Glycerol-3-phosphate | D,L-sn-Glycerol-3-phosphate | sn-Glycerol-3-phosphate | CDP-diacylglycerol biosynthesis II, phosphatidylglycerol biosynthesis II (non-plastidic), triacylglycerol biosynthesis, glycerol degradation IV, glycerol-3-phosphate shuttle, a quinone + sn-glycerol-3-phosphate -> a quinol + dihydroxyacetone phosphate, CDP-diacylglycerol biosynthesis I, cardiolipin biosynthesis II, phosphatidylglycerol biosynthesis I (plastidic), sn-glycerol-3-phosphate + a ubiquinone -> a ubiquinol + dihydroxyacetone phosphate, an electron-transfer-related quinone + sn-glycerol-3-phosphate -> an electron-transfer-related quinol + dihydroxyacetone phosphate |
-0.81 | 0.44 | -0.46 | ||
98 | C0198 | Phosphatidylethanolamine-34:0 | - | - | - | 0.76 | 0.43 | -0.47 | ||
99 | C0158 | MST_1480.5 | - | - | - | -0.68 | 0.46 | -0.48 | ||
100 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
0.68 | 0.42 | -0.43 |