AT3G43840 : -
Query Information
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AGICode AT3G43840
Description 3-oxo-5-alpha-steroid 4-dehydrogenase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G43840 3-oxo-5-alpha-steroid 4-dehydrogenase family protein 1 0.31 -0.32
2 AT4G11840 phospholipase D gamma 3 phospholipase D gamma 3 0.6 0.32 -0.32
3 AT1G48800 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.56 0.32 -0.31
4 AT5G32590 myosin heavy chain-related -0.55 0.32 -0.32
5 AT5G65330 AGAMOUS-like 78 AGAMOUS-like 78 0.55 0.3 -0.31
6 AT4G04270 transposable element gene 0.55 0.29 -0.32
7 AT5G05350 PLAC8 family protein -0.54 0.32 -0.31
8 AT3G45120 transposable element gene -0.54 0.32 -0.32
9 AT5G24760 GroES-like zinc-binding dehydrogenase family protein -0.52 0.31 -0.33
10 AT2G30380 Plant protein of unknown function (DUF641) 0.52 0.32 -0.33
11 AT1G51430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G28370.1); Has 13 Blast hits
to 13 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.51 0.3 -0.31
12 AT3G42640 H(+)-ATPase 8 H(+)-ATPase 8, H(+)-ATPase 8 0.51 0.33 -0.34
13 AT3G44200 NIMA (never in mitosis, gene A)-related 6 NIMA-RELATED KINASE6, IBO1, NIMA
(never in mitosis, gene A)-related
6		 0.51 0.35 -0.33
14 AT5G07660 structural maintenance of chromosomes 6A structural maintenance of
chromosomes 6A		 -0.5 0.29 -0.32
15 AT4G26340 F-box/RNI-like/FBD-like domains-containing protein -0.5 0.3 -0.32
16 AT3G05760 C2H2 and C2HC zinc fingers superfamily protein -0.49 0.32 -0.31
17 AT2G36885 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 172 Blast hits to
172 proteins in 58 species: Archae - 0; Bacteria - 116;
Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 24 (source: NCBI BLink).		 0.49 0.32 -0.31
18 AT3G07890 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.49 0.31 -0.32
19 AT4G21090 MITOCHONDRIAL FERREDOXIN 2 ARABIDOPSIS MITOCHONDRIAL
FERREDOXIN 2, MITOCHONDRIAL
FERREDOXIN 2		 -0.49 0.3 -0.32
20 AT1G06225 CLAVATA3/ESR-RELATED 3 CLAVATA3/ESR-RELATED 3 0.49 0.32 -0.32
21 AT5G60440 AGAMOUS-like 62 AGAMOUS-like 62 0.49 0.32 -0.32
22 AT3G54800 Pleckstrin homology (PH) and lipid-binding START
domains-containing protein		 0.49 0.32 -0.3
23 AT3G30620 transposable element gene 0.48 0.32 -0.34
24 AT3G11200 alfin-like 2 alfin-like 2 -0.48 0.3 -0.3
25 AT1G36105 transposable element gene -0.48 0.31 -0.33
26 AT1G79050 recA DNA recombination family protein -0.48 0.34 -0.31
27 AT5G25910 receptor like protein 52 receptor like protein 52, receptor
like protein 52		 0.48 0.31 -0.3
28 AT3G10990 F-box associated ubiquitination effector family protein -0.48 0.33 -0.35
29 AT1G04490 Protein of unknown function (DUF3527) 0.47 0.32 -0.32
30 AT5G65250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.47 0.3 -0.33
31 AT5G36270 pseudogene of dehydroascorbate reductase -0.46 0.31 -0.33
32 AT5G20390 Glycosyl hydrolase superfamily protein 0.46 0.32 -0.33
33 AT5G64610 histone acetyltransferase of the MYST family 1 histone acetyltransferase of the
MYST family 1		 -0.46 0.31 -0.31
34 AT5G27210 Protein of unknown function, transmembrane-40 -0.46 0.32 -0.33
35 AT4G23910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10970.4); Has 52 Blast hits
to 52 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.45 0.31 -0.31
36 AT2G07230 transposable element gene -0.44 0.31 -0.3
37 AT3G07820 Pectin lyase-like superfamily protein -0.44 0.31 -0.29
38 AT2G19300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.44 0.3 -0.3
39 AT1G63400 Pentatricopeptide repeat (PPR) superfamily protein 0.44 0.32 -0.33
40 AT2G32780 ubiquitin-specific protease 1 ATUBP1, ubiquitin-specific
protease 1		 -0.44 0.29 -0.32
41 AT1G51260 lysophosphatidyl acyltransferase 3 lysophosphatidyl acyltransferase 3 0.44 0.3 -0.32
42 AT1G19890 male-gamete-specific histone H3 MALE-GAMETE-SPECIFIC HISTONE H3,
male-gamete-specific histone H3		 -0.43 0.29 -0.29
43 AT1G17910 Wall-associated kinase family protein -0.43 0.33 -0.33
44 AT5G51580 unknown protein; Has 8 Blast hits to 6 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 1 (source: NCBI
BLink).		 0.43 0.32 -0.33
45 AT1G57700 Protein kinase superfamily protein -0.42 0.29 -0.32
46 AT3G52700 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.42 0.33 -0.33
47 AT1G79370 cytochrome P450, family 79, subfamily C, polypeptide 1 cytochrome P450, family 79,
subfamily C, polypeptide 1		 0.41 0.3 -0.31
48 AT2G33100 cellulose synthase-like D1 cellulose synthase-like D1,
cellulose synthase-like D1,
CELLULOSE-SYNTHASE LIKE D1		 0.41 0.32 -0.31
49 AT4G03380 BEST Arabidopsis thaliana protein match is: nuclear
assembly factor 1 (TAIR:AT1G03530.1); Has 29 Blast hits to
29 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink).		 0.41 0.31 -0.31
50 AT3G55550 Concanavalin A-like lectin protein kinase family protein 0.41 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
51 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		-0.69 0.44 -0.44 C0186
52 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.64 0.44 -0.45 C0091
53 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) -0.64 0.46 -0.43 C0075
54 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		-0.64 0.45 -0.43 C0011
55 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		-0.62 0.45 -0.45 C0262
56 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		-0.61 0.45 -0.46 C0088
57 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis -0.61 0.43 -0.44
58 C0015 p-Coumaric acid - 4-Coumarate scopoletin biosynthesis,
free phenylpropanoid acid biosynthesis,
phenylpropanoid biosynthesis,
simple coumarins biosynthesis,
4-hydroxybenzoate biosynthesis V,
suberin biosynthesis,
phenylpropanoid biosynthesis, initial reactions,
flavonoid biosynthesis 		-0.6 0.43 -0.43 C0015
59 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis 		-0.6 0.43 -0.42 C0073
60 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		-0.59 0.45 -0.44 C0261
61 C0259 Tyramine - Tyramine hydroxycinnamic acid tyramine amides biosynthesis,
suberin biosynthesis 		-0.56 0.31 -0.33 C0259
62 C0069 Citrulline - Citrulline citrulline-nitric oxide cycle,
citrulline biosynthesis,
nitric oxide biosynthesis I (in plants),
urea cycle,
citrulline degradation,
arginine biosynthesis II (acetyl cycle),
arginine biosynthesis I 		-0.44 0.32 -0.31 C0069