AT4G35490 : mitochondrial ribosomal protein L11
Query Information
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AGICode AT4G35490
Description mitochondrial ribosomal protein L11
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G35490 mitochondrial ribosomal protein L11 mitochondrial ribosomal protein
L11		 1 0.33 -0.3
2 AT1G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits
to 40 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.86 0.31 -0.3
3 AT5G23900 Ribosomal protein L13e family protein 0.86 0.31 -0.33
4 AT4G31130 Protein of unknown function (DUF1218) 0.85 0.34 -0.32
5 AT4G29480 Mitochondrial ATP synthase subunit G protein 0.84 0.32 -0.32
6 AT1G27310 nuclear transport factor 2A nuclear transport factor 2A 0.84 0.31 -0.3
7 AT2G21290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 63 Blast hits to 63 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.84 0.33 -0.32
8 AT4G31985 Ribosomal protein L39 family protein 0.83 0.3 -0.34
9 AT4G26210 Mitochondrial ATP synthase subunit G protein 0.83 0.31 -0.32
10 AT5G57290 60S acidic ribosomal protein family 0.81 0.31 -0.31
11 AT2G46540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.81 0.31 -0.32
12 AT2G45790 phosphomannomutase PHOSPHOMANNOMUTASE,
phosphomannomutase		 0.81 0.3 -0.32
13 AT1G03150 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.81 0.32 -0.33
14 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit 0.81 0.3 -0.33
15 AT1G49410 translocase of the outer mitochondrial membrane 6 translocase of the outer
mitochondrial membrane 6		 0.81 0.31 -0.31
16 AT4G13720 Inosine triphosphate pyrophosphatase family protein 0.81 0.35 -0.3
17 AT1G26740 Ribosomal L32p protein family 0.81 0.31 -0.32
18 AT1G07140 Pleckstrin homology (PH) domain superfamily protein SIRANBP 0.8 0.32 -0.32
19 AT2G21195 unknown protein; Has 28 Blast hits to 28 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.8 0.32 -0.31
20 AT4G00170 Plant VAMP (vesicle-associated membrane protein) family
protein		 0.8 0.31 -0.31
21 AT3G53890 Ribosomal protein S21e 0.8 0.3 -0.3
22 AT5G14030 translocon-associated protein beta (TRAPB) family protein 0.8 0.32 -0.31
23 AT2G34520 mitochondrial ribosomal protein S14 mitochondrial ribosomal protein
S14		 0.8 0.31 -0.32
24 AT1G31817 Ribosomal L18p/L5e family protein NUCLEAR FUSION DEFECTIVE 3 0.8 0.32 -0.31
25 AT1G76160 SKU5 similar 5 SKU5 similar 5 0.79 0.32 -0.31
26 AT5G14040 phosphate transporter 3;1 phosphate transporter 3;1 0.79 0.3 -0.32
27 AT2G47580 spliceosomal protein U1A spliceosomal protein U1A 0.79 0.33 -0.35
28 AT1G26750 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.79 0.31 -0.33
29 AT1G14980 chaperonin 10 chaperonin 10 0.79 0.33 -0.33
30 AT1G74270 Ribosomal protein L35Ae family protein 0.79 0.28 -0.3
31 AT5G65430 general regulatory factor 8 14-3-3 PROTEIN G-BOX FACTOR14
KAPPA, GF14 KAPPA, general
regulatory factor 8		 0.78 0.32 -0.32
32 AT5G23140 nuclear-encoded CLP protease P7 CLPP2, nuclear-encoded CLP
protease P7		 0.78 0.32 -0.31
33 AT2G01580 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits
to 129 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.3 -0.32
34 AT5G11340 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.78 0.32 -0.33
35 AT5G02450 Ribosomal protein L36e family protein 0.78 0.36 -0.32
36 AT1G09330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
integral to membrane; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF846, eukaryotic
(InterPro:IPR008564); Has 518 Blast hits to 518 proteins in
206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi
- 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107
(source: NCBI BLink).		 0.78 0.32 -0.3
37 AT1G02140 mago nashi family protein HAPLESS 1, MAGO NASHI, MATERNAL
EFFECT EMBRYO ARREST 63		 0.78 0.32 -0.32
38 AT4G37660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.78 0.32 -0.29
39 AT5G17560 BolA-like family protein 0.77 0.3 -0.31
40 AT4G36420 Ribosomal protein L12 family protein 0.77 0.31 -0.29
41 AT1G53530 Peptidase S24/S26A/S26B/S26C family protein 0.77 0.33 -0.31
42 AT1G71730 unknown protein; Has 52 Blast hits to 52 proteins in 24
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 0.77 0.31 -0.31
43 AT4G29390 Ribosomal protein S30 family protein 0.77 0.32 -0.33
44 AT1G61740 Sulfite exporter TauE/SafE family protein 0.77 0.32 -0.32
45 AT5G40770 prohibitin 3 prohibitin 3, prohibitin 3 0.77 0.32 -0.31
46 AT3G51010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.77 0.33 -0.3
47 AT3G05000 Transport protein particle (TRAPP) component 0.77 0.33 -0.3
48 AT3G13784 cell wall invertase 5 cell wall invertase 5, cell wall
invertase 5		 -0.77 0.32 -0.3
49 AT1G24600 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67920.1); Has 18 Blast hits
to 18 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.77 0.31 -0.3
50 AT1G53240 Lactate/malate dehydrogenase family protein mitochondrial malate dehydrogenase
1		 0.77 0.32 -0.31
51 AT3G04920 Ribosomal protein S24e family protein 0.76 0.32 -0.32
52 AT3G07230 wound-responsive protein-related 0.76 0.34 -0.34
53 AT4G39990 RAB GTPase homolog A4B GTP-BINDING PROTEIN 3, ATRAB11G,
ARABIDOPSIS THALIANA RAB GTPASE
HOMOLOG A 4B, RAB GTPase homolog
A4B		 0.76 0.3 -0.3
54 AT1G62380 ACC oxidase 2 ACC oxidase 2, ATACO2 0.76 0.31 -0.31
55 AT1G27970 nuclear transport factor 2B nuclear transport factor 2B 0.76 0.3 -0.33
56 AT1G22450 cytochrome C oxidase 6B CYTOCHROME C OXIDASE 6B2,
cytochrome C oxidase 6B		 0.76 0.32 -0.32
57 AT4G14420 HR-like lesion-inducing protein-related 0.76 0.31 -0.33
58 AT1G16870 mitochondrial 28S ribosomal protein S29-related 0.76 0.3 -0.32
59 AT5G19760 Mitochondrial substrate carrier family protein 0.76 0.3 -0.32
60 AT4G22720 Actin-like ATPase superfamily protein 0.76 0.32 -0.31
61 AT2G33845 Nucleic acid-binding, OB-fold-like protein 0.76 0.3 -0.34
62 AT3G48140 B12D protein 0.76 0.31 -0.32
63 AT5G53560 cytochrome B5 isoform E ATB5-A, ARABIDOPSIS CYTOCHROME B5
ISOFORM E, B5 #2, cytochrome B5
isoform E		 0.76 0.33 -0.33
64 AT5G25080 Sas10/Utp3/C1D family 0.76 0.32 -0.31
65 AT1G26630 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1)
protein		 EUKARYOTIC ELONGATION FACTOR 5A-2,
EUKARYOTIC ELONGATION FACTOR 5A-2,
FUMONISIN B1-RESISTANT12		 0.76 0.33 -0.32
66 AT4G00810 60S acidic ribosomal protein family 0.76 0.31 -0.3
67 AT3G16940 calmodulin binding;transcription regulators -0.75 0.31 -0.31
68 AT1G65390 phloem protein 2 A5 phloem protein 2 A5, phloem
protein 2 A5		 0.75 0.31 -0.33
69 AT3G17390 S-adenosylmethionine synthetase family protein METHIONINE ADENOSYLTRANSFERASE 4,
METHIONINE OVER-ACCUMULATOR 3,
S-ADENOSYLMETHIONINE SYNTHETASE 3		 0.75 0.32 -0.31
70 AT2G19760 profilin 1 PROFILIN 1, profilin 1 0.75 0.31 -0.3
71 AT5G54900 RNA-binding protein 45A RNA-binding protein 45A,
RNA-binding protein 45A		 0.75 0.32 -0.32
72 AT2G40010 Ribosomal protein L10 family protein 0.75 0.31 -0.3
73 AT2G30060 Pleckstrin homology (PH) domain superfamily protein 0.75 0.31 -0.32
74 AT3G09820 adenosine kinase 1 adenosine kinase 1, ATADK1 0.75 0.31 -0.33
75 AT5G15350 early nodulin-like protein 17 AtENODL17, early nodulin-like
protein 17		 0.75 0.31 -0.35
76 AT4G39920 C-CAP/cofactor C-like domain-containing protein PORCINO, TUBULIN-FOLDING COFACTOR
C		 0.75 0.31 -0.31
77 AT5G16470 zinc finger (C2H2 type) family protein 0.75 0.32 -0.32
78 AT4G16510 YbaK/aminoacyl-tRNA synthetase-associated domain 0.75 0.3 -0.34
79 AT5G08040 mitochondrial import receptor subunit TOM5 homolog mitochondrial import receptor
subunit TOM5 homolog		 0.75 0.32 -0.33
80 AT5G18830 squamosa promoter binding protein-like 7 SQUAMOSA PROMOTER BINDING
PROTEIN-LIKE 7, squamosa promoter
binding protein-like 7		 -0.75 0.32 -0.33
81 AT1G27435 unknown protein; Has 16 Blast hits to 16 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.75 0.31 -0.33
82 AT5G03345 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Magnesium transporter (InterPro:IPR018937); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.74 0.3 -0.31
83 AT3G42460 transposable element gene -0.74 0.31 -0.33
84 AT1G72170 Domain of unknown function (DUF543) 0.74 0.3 -0.31
85 AT2G45010 PLAC8 family protein 0.74 0.31 -0.29
86 AT3G48570 secE/sec61-gamma protein transport protein 0.74 0.3 -0.32
87 AT4G29830 Transducin/WD40 repeat-like superfamily protein vernalization independence 3 0.74 0.29 -0.31
88 AT1G79550 phosphoglycerate kinase phosphoglycerate kinase 0.74 0.3 -0.3
89 AT4G26410 Uncharacterised conserved protein UCP022280 0.74 0.31 -0.31
90 AT1G67350 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.74 0.33 -0.3
91 AT5G24650 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.74 0.33 -0.33
92 AT3G14290 20S proteasome alpha subunit E2 20S proteasome alpha subunit E2 0.74 0.32 -0.31
93 AT2G19900 NADP-malic enzyme 1 Arabidopsis thaliana NADP-malic
enzyme 1, NADP-malic enzyme 1		 -0.74 0.32 -0.33
94 AT2G40330 PYR1-like 6 PYR1-like 6, regulatory components
of ABA receptor 9		 0.74 0.31 -0.32
95 AT5G05440 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 PYRABACTIN RESISTANCE 1-LIKE 5,
regulatory component of ABA
receptor 8		 0.74 0.31 -0.32
96 AT1G77800 PHD finger family protein -0.73 0.32 -0.32
97 AT5G43840 heat shock transcription factor A6A heat shock transcription factor
A6A, heat shock transcription
factor A6A		 -0.73 0.31 -0.32
98 AT5G45310 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: stem, inflorescence meristem, root, leaf; EXPRESSED
DURING: LP.04 four leaves visible; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.73 0.32 -0.32
99 AT2G18050 histone H1-3 histone H1-3 -0.73 0.31 -0.31
100 AT5G62490 HVA22 homologue B ARABIDOPSIS THALIANA HVA22
HOMOLOGUE B, HVA22 homologue B		 -0.71 0.3 -0.34
101 AT3G63210 Protein of unknown function (DUF581) MEDIATOR OF ABA-REGULATED DORMANCY
1		 -0.71 0.32 -0.31
102 AT3G08020 PHD finger family protein -0.71 0.3 -0.31
103 AT2G18440 GUT15 (GENE WITH UNSTABLE TRANSCRIPT 15); other RNA GENE WITH UNSTABLE TRANSCRIPT 15 -0.7 0.31 -0.3
104 AT5G44030 cellulose synthase A4 cellulose synthase A4, IRREGULAR
XYLEM 5, NWS2		 -0.7 0.32 -0.32
105 AT3G22380 time for coffee TIME FOR COFFEE -0.7 0.32 -0.32
106 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 -0.69 0.31 -0.31
107 AT1G02310 Glycosyl hydrolase superfamily protein endo-beta-mannanase 1 -0.69 0.32 -0.32
108 AT1G73570 HCP-like superfamily protein -0.69 0.31 -0.3
109 AT3G57540 Remorin family protein -0.68 0.29 -0.31
110 AT1G26450 Carbohydrate-binding X8 domain superfamily protein -0.68 0.3 -0.31
111 AT1G67310 Calmodulin-binding transcription activator protein with
CG-1 and Ankyrin domains		 -0.68 0.33 -0.34
112 AT5G63560 HXXXD-type acyl-transferase family protein -0.68 0.31 -0.3
113 AT3G20120 cytochrome P450, family 705, subfamily A, polypeptide 21 cytochrome P450, family 705,
subfamily A, polypeptide 21		 -0.68 0.28 -0.32
114 AT3G19960 myosin 1 myosin 1 -0.67 0.32 -0.31
115 AT3G53980 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.67 0.32 -0.32
116 AT4G14760 kinase interacting (KIP1-like) family protein -0.67 0.32 -0.32
117 AT4G26180 Mitochondrial substrate carrier family protein -0.66 0.32 -0.31
118 AT3G57570 ARM repeat superfamily protein -0.65 0.3 -0.31
119 AT1G45160 Protein kinase superfamily protein -0.65 0.34 -0.3
120 AT3G03240 alpha/beta-Hydrolases superfamily protein -0.65 0.33 -0.32
121 AT5G10880 tRNA synthetase-related / tRNA ligase-related -0.63 0.31 -0.29
122 AT3G06400 chromatin-remodeling protein 11 chromatin-remodeling protein 11 -0.62 0.33 -0.3
123 AT5G27950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.32 -0.32
124 AT1G68710 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.62 0.29 -0.3
125 AT3G05030 sodium hydrogen exchanger 2 ATNHX2, sodium hydrogen exchanger
2		 -0.61 0.31 -0.31
126 AT3G25990 Homeodomain-like superfamily protein -0.61 0.33 -0.32
127 AT5G37500 gated outwardly-rectifying K+ channel gated outwardly-rectifying K+
channel		 -0.61 0.31 -0.33
128 AT2G07650 transposable element gene -0.61 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
129 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		-0.83 0.42 -0.43 C0109
130 C0266 Xylose D-Xylose D-Xylose xylose degradation I -0.8 0.46 -0.47 C0266
131 C0057 Anthranilic acid - Anthranilate tryptophan biosynthesis,
benzoylanthranilate biosynthesis 		-0.79 0.44 -0.45 C0057
132 C0225 Raffinose D-(+)-Raffinose Raffinose ajugose biosynthesis II (galactinol-independent),
stachyose biosynthesis,
stachyose degradation 		-0.77 0.45 -0.44 C0225
133 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.71 0.46 -0.45 C0107
134 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		-0.69 0.49 -0.45 C0056
135 C0137 Leucine L-Leucine L-Leucine indole-3-acetyl-amino acid biosynthesis,
leucine biosynthesis,
jasmonoyl-amino acid conjugates biosynthesis I,
IAA biosynthesis II,
tRNA charging,
leucine degradation I 		-0.66 0.32 -0.31 C0137
136 C0052 Adenosine - Adenosine adenine and adenosine salvage VI,
S-adenosyl-L-methionine cycle II,
cytokinins degradation,
methionine degradation I (to homocysteine),
adenine and adenosine salvage II 		-0.62 0.31 -0.31 C0052
137 C0140 Lysine L-Lysine L-Lysine lysine degradation II,
tRNA charging,
lysine biosynthesis VI,
lysine degradation I 		-0.62 0.32 -0.31 C0140