AT4G34640 : ERG9
Query Information
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AGICode AT4G34640
Description squalene synthase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G34640 squalene synthase 1 ERG9, squalene synthase 1 1 0.31 -0.29
2 AT5G54130 Calcium-binding endonuclease/exonuclease/phosphatase family 0.67 0.28 -0.32
3 AT5G05750 DNAJ heat shock N-terminal domain-containing protein -0.65 0.32 -0.32
4 AT1G50740 Transmembrane proteins 14C -0.65 0.31 -0.31
5 AT1G23880 NHL domain-containing protein 0.63 0.35 -0.31
6 AT1G60960 iron regulated transporter 3 IRON REGULATED TRANSPORTER 3, iron
regulated transporter 3		 0.63 0.32 -0.34
7 AT5G16200 50S ribosomal protein-related -0.61 0.32 -0.33
8 AT2G28200 C2H2-type zinc finger family protein 0.61 0.31 -0.32
9 AT5G66380 folate transporter 1 folate transporter 1, folate
transporter 1		 0.61 0.3 -0.31
10 AT1G55450 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.6 0.3 -0.32
11 AT2G37320 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.32 -0.31
12 AT2G25760 Protein kinase family protein 0.6 0.3 -0.31
13 AT5G02290 Protein kinase superfamily protein NAK -0.59 0.33 -0.34
14 AT1G74000 strictosidine synthase 3 strictosidine synthase 3 0.59 0.31 -0.31
15 AT5G53130 cyclic nucleotide gated channel 1 CYCLIC NUCLEOTIDE-GATED CHANNEL 1,
cyclic nucleotide gated channel 1		 -0.59 0.3 -0.3
16 AT2G37720 TRICHOME BIREFRINGENCE-LIKE 15 TRICHOME BIREFRINGENCE-LIKE 15 -0.59 0.32 -0.33
17 AT3G16220 Predicted eukaryotic LigT 0.58 0.32 -0.32
18 AT1G49270 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 7, proline-rich
extensin-like receptor kinase 7		 -0.58 0.3 -0.31
19 AT3G47420 phosphate starvation-induced gene 3 Glycerol-3-phosphate permease 1,
phosphate starvation-induced gene
3, Glycerol-3-phosphate permease
1, phosphate starvation-induced
gene 3		 0.57 0.3 -0.32
20 AT4G33925 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 suppressor of sni1 2 -0.57 0.33 -0.34
21 AT2G04795 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35732.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.31 -0.31
22 AT4G16447 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.57 0.31 -0.31
23 AT1G32330 heat shock transcription factor A1D heat shock transcription factor
A1D, heat shock transcription
factor A1D		 0.57 0.31 -0.28
24 AT4G27050 F-box/RNI-like superfamily protein 0.57 0.32 -0.33
25 AT2G17660 RPM1-interacting protein 4 (RIN4) family protein -0.57 0.32 -0.31
26 AT2G36700 Pectin lyase-like superfamily protein 0.56 0.34 -0.32
27 AT4G18540 unknown protein; Has 209 Blast hits to 205 proteins in 54
species: Archae - 0; Bacteria - 17; Metazoa - 2; Fungi -
150; Plants - 40; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.56 0.29 -0.32
28 AT4G01790 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.56 0.3 -0.34
29 AT4G23220 cysteine-rich RLK (RECEPTOR-like protein kinase) 14 cysteine-rich RLK (RECEPTOR-like
protein kinase) 14		 -0.56 0.32 -0.35
30 AT1G14800 Nucleic acid-binding, OB-fold-like protein -0.55 0.31 -0.34
31 AT5G12940 Leucine-rich repeat (LRR) family protein -0.55 0.32 -0.32
32 AT5G54130 Calcium-binding endonuclease/exonuclease/phosphatase family 0.54 0.33 -0.31
33 AT5G49310 importin alpha isoform 5 importin alpha isoform 5 -0.54 0.33 -0.31
34 AT4G25420 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 AT2301, ARABIDOPSIS THALIANA
GIBBERELLIN 20-OXIDASE 1, GA20OX1,
GA REQUIRING 5		 -0.54 0.32 -0.29
35 AT3G13772 transmembrane nine 7 AtTMN7, transmembrane nine 7 0.54 0.32 -0.32
36 AT4G30820 cyclin-dependent kinase-activating kinase assembly
factor-related / CDK-activating kinase assembly
factor-related		 0.54 0.31 -0.33
37 AT5G16640 Pentatricopeptide repeat (PPR) superfamily protein -0.53 0.33 -0.32
38 AT1G59900 pyruvate dehydrogenase complex E1 alpha subunit pyruvate dehydrogenase complex E1
alpha subunit, pyruvate
dehydrogenase complex E1 alpha
subunit		 -0.53 0.32 -0.33
39 AT2G21990 Protein of unknown function, DUF617 -0.53 0.3 -0.31
40 AT2G22440 BEST Arabidopsis thaliana protein match is: Ribonuclease
H-like superfamily protein (TAIR:AT4G29090.1); Has 208
Blast hits to 191 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.32 -0.32
41 AT1G11880 transferases, transferring hexosyl groups 0.53 0.32 -0.29
42 AT4G37900 Protein of unknown function (duplicated DUF1399) 0.53 0.32 -0.32
43 AT4G31570 CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G24460.1); Has 194354 Blast hits to 66887 proteins
in 3244 species: Archae - 3688; Bacteria - 38556; Metazoa -
84828; Fungi - 17265; Plants - 10589; Viruses - 805; Other
Eukaryotes - 38623 (source: NCBI BLink).		 0.53 0.32 -0.33
44 AT1G33130 transposable element gene -0.52 0.32 -0.32
45 AT1G70570 anthranilate phosphoribosyltransferase, putative 0.52 0.32 -0.3
46 AT1G78440 Arabidopsis thaliana gibberellin 2-oxidase 1 Arabidopsis thaliana gibberellin
2-oxidase 1, gibberellin 2-oxidase
1		 -0.52 0.34 -0.32
47 AT5G01980 RING/U-box superfamily protein -0.52 0.31 -0.31
48 AT3G57820 60S ribosomal protein L21 (RPL21F), pseudogene, 60S
RIBOSOMAL PROTEIN L21 - Arabidopsis thaliana,
SWISSPROT:RL21_ARATH; blastp match of 75% identity and
2.5e-15 P-value to GP|3885884|gb|AAC78102.1||AF093630 60S
ribosomal protein L21 {Oryza sativa}		 -0.52 0.32 -0.3
49 AT5G23230 nicotinamidase 2 nicotinamidase 2 -0.52 0.32 -0.31
50 AT1G69040 ACT domain repeat 4 ACT domain repeat 4 -0.52 0.33 -0.31
51 AT4G39410 WRKY DNA-binding protein 13 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 13, WRKY
DNA-binding protein 13		 -0.52 0.31 -0.31
52 AT4G11940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11930.1); Has 37 Blast hits
to 37 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.52 0.31 -0.32
53 AT3G61920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot, hypocotyl,
root, egg cell; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77
proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.51 0.32 -0.32
54 AT3G28170 unknown protein; Has 2 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.51 0.34 -0.33
55 AT3G02770 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 -0.51 0.3 -0.31
56 AT2G27250 CLAVATA3 AtCLV3, CLAVATA3 -0.5 0.32 -0.31
57 AT1G68370 Chaperone DnaJ-domain superfamily protein ALTERED RESPONSE TO GRAVITY 1 -0.5 0.29 -0.31
58 AT5G10140 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 25, FLC, FLOWERING
LOCUS C, FLOWERING LOCUS F		 -0.5 0.32 -0.32
59 AT2G16110 pseudogene, similar to putative AP endonuclease/reverse
transcriptase, blastp match of 34% identity and 5.9e-45
P-value to GP|21952510|gb|AAM82604.1|AF525305_2|AF525305
putative AP endonuclease/reverse transcriptase {Brassica
napus}		 -0.5 0.33 -0.29
60 AT1G56410 heat shock protein 70 (Hsp 70) family protein EARLY-RESPONSIVE TO DEHYDRATION 2,
HEAT SHOCK PROTEIN 70T-1		 0.5 0.3 -0.3
61 AT2G14690 Glycosyl hydrolase superfamily protein -0.5 0.31 -0.32
62 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family -0.49 0.31 -0.34
63 AT1G55960 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.49 0.32 -0.3
64 AT3G54310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G38430.1); Has 44 Blast hits
to 41 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.49 0.3 -0.32
65 AT5G20580 BEST Arabidopsis thaliana protein match is: FRIGIDA
interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast
hits to 167 proteins in 73 species: Archae - 0; Bacteria -
25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0;
Other Eukaryotes - 16 (source: NCBI BLink).		 -0.49 0.33 -0.3
66 AT1G49950 telomere repeat binding factor 1 TELOMERE REPEAT BINDING FACTOR 1,
telomere repeat binding factor 1		 -0.49 0.31 -0.29
67 AT2G16670 transposable element gene -0.49 0.34 -0.31
68 AT1G47270 tubby like protein 6 tubby like protein 6, tubby like
protein 6		 -0.49 0.33 -0.31
69 AT4G04440 transposable element gene -0.49 0.31 -0.31
70 AT5G54050 Cysteine/Histidine-rich C1 domain family protein -0.49 0.34 -0.32
71 AT4G02200 Drought-responsive family protein -0.49 0.31 -0.33
72 AT5G14870 cyclic nucleotide-gated channel 18 CYCLIC NUCLEOTIDE-GATED CHANNEL
18, cyclic nucleotide-gated
channel 18		 -0.49 0.29 -0.32
73 AT5G10270 cyclin-dependent kinase C;1 cyclin-dependent kinase C;1 0.47 0.31 -0.34
74 AT1G32570 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.47 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
75 C0034 4-Methylthio-n-butylglucosinolate - 4-Methylthiobutyl glucosinolate glucosinolate biosynthesis from dihomomethionine -0.53 0.32 -0.32 C0034
76 C0244 Sucrose D-Sucrose Sucrose stachyose biosynthesis,
fructan degradation,
stachyose degradation,
galactose degradation III,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
sucrose degradation III,
UDP-glucose biosynthesis (from sucrose),
ajugose biosynthesis II (galactinol-independent),
sucrose biosynthesis I 		-0.52 0.32 -0.33 C0244