AGICode | AT4G35010 |
Description | beta-galactosidase 11 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G35010 | beta-galactosidase 11 | beta-galactosidase 11 | 1 | 0.32 | -0.34 | ||
2 | AT4G09950 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.66 | 0.34 | -0.32 | |||
3 | AT2G36030 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.66 | 0.31 | -0.3 | |||
4 | AT1G68540 | NAD(P)-binding Rossmann-fold superfamily protein | cinnamoyl coA reductase-like 6, tetraketide alpha-pyrone reductase 2 |
0.66 | 0.32 | -0.3 | ||
5 | AT2G35580 | Serine protease inhibitor (SERPIN) family protein | 0.66 | 0.3 | -0.33 | |||
6 | AT4G26340 | F-box/RNI-like/FBD-like domains-containing protein | 0.66 | 0.32 | -0.32 | |||
7 | AT5G03270 | lysine decarboxylase family protein | LONELY GUY 6 | 0.65 | 0.32 | -0.32 | ||
8 | AT1G17800 | early nodulin-like protein 22 | AtENODL22, early nodulin-like protein 22 |
0.64 | 0.31 | -0.31 | ||
9 | AT1G80590 | WRKY DNA-binding protein 66 | ATWRKY66, WRKY DNA-binding protein 66 |
0.64 | 0.33 | -0.33 | ||
10 | AT3G45390 | Concanavalin A-like lectin protein kinase family protein | 0.62 | 0.3 | -0.3 | |||
11 | AT3G55870 | ADC synthase superfamily protein | 0.62 | 0.34 | -0.32 | |||
12 | AT1G29600 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.62 | 0.32 | -0.31 | |||
13 | AT2G05720 | Transducin/WD40 repeat-like superfamily protein | 0.61 | 0.3 | -0.3 | |||
14 | AT2G03880 | Pentatricopeptide repeat (PPR) superfamily protein | required for efficiency of mitochondrial editing 1 |
-0.61 | 0.33 | -0.3 | ||
15 | AT5G59370 | actin 4 | actin 4 | 0.61 | 0.32 | -0.3 | ||
16 | AT2G22740 | SU(VAR)3-9 homolog 6 | SET DOMAIN PROTEIN 23, SU(VAR)3-9 homolog 6 |
0.61 | 0.34 | -0.32 | ||
17 | AT4G34880 | Amidase family protein | -0.61 | 0.3 | -0.31 | |||
18 | AT5G63480 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.6 | 0.29 | -0.32 | |||
19 | AT1G64320 | myosin heavy chain-related | -0.6 | 0.29 | -0.32 | |||
20 | AT1G35220 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 313 Blast hits to 185 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). |
-0.59 | 0.32 | -0.31 | |||
21 | AT1G16290 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Lytic transglycosylase-like, catalytic (InterPro:IPR008258); Has 171 Blast hits to 155 proteins in 40 species: Archae - 0; Bacteria - 54; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). |
0.58 | 0.32 | -0.32 | |||
22 | AT5G39370 | Curculin-like (mannose-binding) lectin family protein | 0.58 | 0.33 | -0.35 | |||
23 | AT4G32630 | ArfGap/RecO-like zinc finger domain-containing protein | 0.58 | 0.33 | -0.31 | |||
24 | AT1G75930 | extracellular lipase 6 | extracellular lipase 6 | 0.57 | 0.3 | -0.32 | ||
25 | AT1G53360 | F-box associated ubiquitination effector family protein | 0.57 | 0.31 | -0.31 | |||
26 | AT4G00770 | unknown protein; Has 127 Blast hits to 120 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 8; Plants - 62; Viruses - 3; Other Eukaryotes - 46 (source: NCBI BLink). |
0.57 | 0.31 | -0.31 | |||
27 | AT2G13920 | pseudogene, CHP-rich zinc finger protein, putative, contains weak PHD zinc finger motifscontains weak PHD zinc finger motifsDC1 domain, a divergent protein kinase C domain of unknown function. |
0.56 | 0.32 | -0.29 | |||
28 | AT5G44880 | transposable element gene | 0.56 | 0.32 | -0.31 | |||
29 | AT2G03210 | fucosyltransferase 2 | ATFUT2, fucosyltransferase 2 | 0.55 | 0.3 | -0.31 | ||
30 | AT2G35570 | pseudogene, serpin (serine protease inhibitor) family, similar to phloem serpin-1 (Cucurbita maxima) GI:9937311; blastp match of 49% identity and 9.9e-85 P-value to GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein {Citrus x paradisi} |
0.55 | 0.32 | -0.35 | |||
31 | AT4G36930 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
SPATULA | -0.55 | 0.35 | -0.31 | ||
32 | AT4G26930 | myb domain protein 97 | myb domain protein 97, myb domain protein 97 |
0.55 | 0.3 | -0.35 | ||
33 | AT2G19330 | plant intracellular ras group-related LRR 6 | plant intracellular ras group-related LRR 6 |
0.55 | 0.33 | -0.31 | ||
34 | AT5G20870 | O-Glycosyl hydrolases family 17 protein | 0.55 | 0.34 | -0.3 | |||
35 | AT4G07450 | transposable element gene | 0.55 | 0.32 | -0.32 | |||
36 | AT2G20190 | CLIP-associated protein | CLIP-ASSOCIATED PROTEIN, CLIP-associated protein |
0.55 | 0.29 | -0.3 | ||
37 | AT2G35740 | nositol transporter 3 | NOSITOL TRANSPORTER 3, nositol transporter 3 |
0.55 | 0.31 | -0.33 | ||
38 | AT1G33460 | transposable element gene | 0.54 | 0.31 | -0.31 | |||
39 | AT1G36240 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.54 | 0.3 | -0.3 | |||
40 | AT1G15190 | Fasciclin-like arabinogalactan family protein | 0.54 | 0.32 | -0.33 | |||
41 | AT2G28360 | SIT4 phosphatase-associated family protein | -0.54 | 0.33 | -0.31 | |||
42 | AT3G57600 | Integrase-type DNA-binding superfamily protein | 0.54 | 0.3 | -0.31 | |||
43 | AT1G56620 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.54 | 0.31 | -0.32 | |||
44 | AT2G32890 | RALF-like 17 | RALF-like 17 | 0.54 | 0.31 | -0.31 | ||
45 | AT3G16610 | pentatricopeptide (PPR) repeat-containing protein | -0.53 | 0.34 | -0.33 | |||
46 | AT2G37590 | DNA binding with one finger 2.4 | ATDOF2.4, DNA binding with one finger 2.4 |
0.53 | 0.34 | -0.3 | ||
47 | AT5G59660 | Leucine-rich repeat protein kinase family protein | 0.53 | 0.31 | -0.32 | |||
48 | AT3G30340 | nodulin MtN21 /EamA-like transporter family protein | 0.53 | 0.31 | -0.29 | |||
49 | AT3G10990 | F-box associated ubiquitination effector family protein | 0.53 | 0.33 | -0.3 | |||
50 | AT2G17940 | Plant protein of unknown function (DUF827) | -0.52 | 0.32 | -0.34 | |||
51 | AT5G56160 | Sec14p-like phosphatidylinositol transfer family protein | 0.52 | 0.31 | -0.32 | |||
52 | AT4G38070 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.52 | 0.32 | -0.29 | |||
53 | AT1G44224 | ECA1 gametogenesis related family protein | -0.52 | 0.33 | -0.33 | |||
54 | AT1G13680 | PLC-like phosphodiesterases superfamily protein | -0.51 | 0.3 | -0.3 | |||
55 | AT5G45500 | RNI-like superfamily protein | -0.51 | 0.32 | -0.31 | |||
56 | AT3G15970 | NUP50 (Nucleoporin 50 kDa) protein | -0.51 | 0.34 | -0.33 | |||
57 | AT2G43840 | UDP-glycosyltransferase 74 F1 | UDP-glycosyltransferase 74 F1 | -0.5 | 0.31 | -0.31 | ||
58 | AT4G33160 | F-box family protein | -0.49 | 0.31 | -0.31 | |||
59 | AT3G48830 | polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein |
-0.47 | 0.3 | -0.31 | |||
60 | AT1G68170 | nodulin MtN21 /EamA-like transporter family protein | -0.47 | 0.32 | -0.32 | |||
61 | AT5G59200 | Tetratricopeptide repeat (TPR)-like superfamily protein | ORGANELLE TRANSCRIPT PROCESSING 80 | -0.46 | 0.32 | -0.32 | ||
62 | AT1G64830 | Eukaryotic aspartyl protease family protein | -0.46 | 0.32 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
63 | C0087 | Erythrose-4-phosphate | D-Erythrose-4-phosphate | D-Erythrose-4-phosphate | Rubisco shunt, pentose phosphate pathway (non-oxidative branch), chorismate biosynthesis, Calvin-Benson-Bassham cycle |
0.73 | 0.44 | -0.44 | ||
64 | C0159 | MST_1505.6 | - | - | - | 0.7 | 0.44 | -0.43 | ||
65 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
0.69 | 0.45 | -0.43 | ||
66 | C0011 | N-Acetyl-glutamic acid | N-Acetyl-D,L-glutamic acid | N-Acetyl-L-glutamate | arginine biosynthesis II (acetyl cycle), ornithine biosynthesis |
0.68 | 0.45 | -0.45 | ||
67 | C0027 | 2-Oxoglutaric acid | - | α-Ketoglutarate | gibberellin biosynthesis III (early C-13 hydroxylation), leucopelargonidin and leucocyanidin biosynthesis, aspartate degradation II, ornithine biosynthesis, isoleucine biosynthesis I (from threonine), pantothenate biosynthesis, phenylalanine degradation III, flavonol biosynthesis, lysine biosynthesis VI, luteolin biosynthesis, ammonia assimilation cycle II, serine biosynthesis, flavonoid biosynthesis, glutamate biosynthesis V, aspartate biosynthesis, glutamate degradation I, gibberellin inactivation I (2beta-hydroxylation), alanine degradation III, photorespiration, valine biosynthesis, glycine biosynthesis, arginine biosynthesis II (acetyl cycle), arginine degradation I (arginase pathway), gibberellin biosynthesis II (early C-3 hydroxylation), leucine biosynthesis, glutamate biosynthesis IV, tyrosine biosynthesis II, proline biosynthesis III, citrulline biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), L-Ndelta-acetylornithine biosynthesis, isoleucine degradation I, alanine biosynthesis II, tyrosine biosynthesis I, TCA cycle variation III (eukaryotic), leucine degradation I, alanine degradation II (to D-lactate), TCA cycle variation V (plant), arginine degradation VI (arginase 2 pathway), valine degradation I, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), 2-ketoglutarate dehydrogenase complex, glutamate degradation IV, tyrosine degradation I, anthocyanin biosynthesis (delphinidin 3-O-glucoside), IAA biosynthesis I, phenylalanine biosynthesis II, lysine degradation II, scopoletin biosynthesis, 4-hydroxyphenylpyruvate biosynthesis, histidine biosynthesis, glutamine biosynthesis III, leucodelphinidin biosynthesis |
0.68 | 0.45 | -0.45 | ||
68 | C0006 | β-Homothreonine | L-β-Homothreonine | - | - | 0.66 | 0.45 | -0.47 | ||
69 | C0149 | Mevalonolactone | D,L-Mevalonolactone | - | terpenoid biosynthesis | 0.65 | 0.43 | -0.48 |