AT4G32850 : nuclear poly(a) polymerase
Query Information
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AGICode AT4G32850
Description nuclear poly(a) polymerase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G32850 nuclear poly(a) polymerase nuclear poly(a) polymerase,
poly(A) polymerase IV		 1 0.33 -0.34
2 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2		 0.83 0.3 -0.32
3 AT5G22850 Eukaryotic aspartyl protease family protein 0.8 0.32 -0.32
4 AT3G61710 AUTOPHAGY 6 ATATG6, AtBECLIN1, AUTOPHAGY 6,
BECLIN1		 0.8 0.3 -0.31
5 AT1G54710 homolog of yeast autophagy 18 (ATG18) H homolog of yeast autophagy 18
(ATG18) H, homolog of yeast
autophagy 18 (ATG18) H		 0.79 0.31 -0.29
6 AT1G17680 tetratricopeptide repeat (TPR)-containing protein 0.79 0.31 -0.31
7 AT1G12360 Sec1/munc18-like (SM) proteins superfamily keule 0.78 0.31 -0.33
8 AT1G24190 SIN3-like 3 ARABIDOPSIS THALIANA SIN3 HOMOLOG,
ARABIDOPSIS THALIANA SIN3 HOMOLOG,
SIN3-like 3		 0.77 0.32 -0.33
9 AT1G20880 RNA-binding (RRM/RBD/RNP motifs) family protein 0.76 0.3 -0.32
10 AT3G57300 INO80 ortholog INO80 ORTHOLOG, INO80 ortholog 0.76 0.33 -0.31
11 AT1G03080 kinase interacting (KIP1-like) family protein 0.76 0.31 -0.33
12 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 0.75 0.32 -0.31
13 AT3G26000 Ribonuclease inhibitor 0.75 0.31 -0.33
14 AT1G45160 Protein kinase superfamily protein 0.75 0.32 -0.33
15 AT1G13380 Protein of unknown function (DUF1218) -0.75 0.31 -0.33
16 AT3G16050 pyridoxine biosynthesis 1.2 A37, ARABIDOPSIS THALIANA
PYRIDOXINE BIOSYNTHESIS 1.2,
pyridoxine biosynthesis 1.2		 -0.74 0.31 -0.32
17 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.74 0.32 -0.31
18 AT1G73980 Phosphoribulokinase / Uridine kinase family 0.74 0.32 -0.33
19 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins
in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa -
70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other
Eukaryotes - 33775 (source: NCBI BLink).		 TGN-localized SYP41 interacting
protein		 0.74 0.31 -0.32
20 AT3G63180 TIC-like TICKLE, TIC-like 0.73 0.35 -0.31
21 AT4G00550 digalactosyl diacylglycerol deficient 2 digalactosyl diacylglycerol
deficient 2		 0.73 0.32 -0.34
22 AT1G32750 HAC13 protein (HAC13) GTD1, HISTONE ACETYLTRANSFERASE OF
THE CBP FAMILY 13, HAF01, HISTONE
ACETYLTRANSFERASE OF THE TAFII250
FAMILY 1, TBP-ASSOCIATED FACTOR 1		 0.73 0.32 -0.31
23 AT1G05350 NAD(P)-binding Rossmann-fold superfamily protein -0.73 0.31 -0.3
24 AT3G10730 SAD1/UNC-84 domain protein 2 ARABIDOPSIS SAD1/UNC-84 DOMAIN
PROTEIN 2, SAD1/UNC-84 domain
protein 2		 -0.72 0.34 -0.32
25 AT5G16210 HEAT repeat-containing protein 0.72 0.32 -0.33
26 AT4G23980 auxin response factor 9 auxin response factor 9 0.72 0.3 -0.33
27 AT5G46340 O-acetyltransferase family protein REDUCED WALL ACETYLATION 1 0.72 0.28 -0.29
28 AT5G25520 SPOC domain / Transcription elongation factor S-II protein 0.72 0.3 -0.32
29 AT5G47630 mitochondrial acyl carrier protein 3 mitochondrial acyl carrier protein
3		 -0.72 0.3 -0.32
30 AT1G20490 AMP-dependent synthetase and ligase family protein 0.71 0.29 -0.31
31 AT5G64060 NAC domain containing protein 103 NAC domain containing protein 103,
NAC domain containing protein 103		 -0.71 0.32 -0.32
32 AT3G44780 Cysteine proteinases superfamily protein -0.71 0.31 -0.33
33 AT1G48790 associated molecule with the SH3 domain of STAM 1 associated molecule with the SH3
domain of STAM 1		 0.71 0.31 -0.32
34 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B 0.71 0.3 -0.37
35 AT5G26240 chloride channel D ATCLC-D, chloride channel D 0.71 0.31 -0.31
36 AT3G19930 sugar transporter 4 SUGAR TRANSPORTER 4, sugar
transporter 4		 -0.71 0.33 -0.31
37 AT1G58230 binding 0.71 0.31 -0.3
38 AT5G24350 CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39
(InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 0.7 0.29 -0.3
39 AT3G07160 glucan synthase-like 10 glucan synthase-like 10, CALS9,
gsl10, glucan synthase-like 10		 0.7 0.32 -0.32
40 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.7 0.31 -0.32
41 AT5G24840 tRNA (guanine-N-7) methyltransferase -0.7 0.31 -0.31
42 AT5G05570 transducin family protein / WD-40 repeat family protein 0.7 0.32 -0.32
43 AT5G42580 cytochrome P450, family 705, subfamily A, polypeptide 12 cytochrome P450, family 705,
subfamily A, polypeptide 12		 0.7 0.32 -0.32
44 AT5G64900 precursor of peptide 1 ARABIDOPSIS THALIANA PEPTIDE 1,
PEPTIDE 1, precursor of peptide 1		 0.69 0.32 -0.31
45 AT3G51120 DNA binding;zinc ion binding;nucleic acid binding;nucleic
acid binding		 0.69 0.31 -0.36
46 AT4G18160 Ca2+ activated outward rectifying K+ channel 6 CA2+ ACTIVATED OUTWARD RECTIFYING
K+ CHANNEL 6, ATTPK3, Ca2+
activated outward rectifying K+
channel 6, TPK3		 0.69 0.32 -0.32
47 AT3G19190 autophagy 2 ATATG2, AUTOPHAGY 2 0.69 0.32 -0.29
48 AT5G15240 Transmembrane amino acid transporter family protein 0.68 0.3 -0.34
49 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein 0.68 0.32 -0.31
50 AT5G61910 DCD (Development and Cell Death) domain protein 0.68 0.33 -0.33
51 AT1G59930 MADS-box family protein -0.68 0.32 -0.29
52 AT1G72710 casein kinase 1-like protein 2 casein kinase 1-like protein 2 0.68 0.32 -0.32
53 AT2G25490 EIN3-binding F box protein 1 EIN3-binding F box protein 1, FBL6 0.68 0.32 -0.34
54 AT1G18160 Protein kinase superfamily protein 0.68 0.28 -0.32
55 AT5G65620 Zincin-like metalloproteases family protein 0.68 0.3 -0.31
56 AT3G05210 nucleotide repair protein, putative ERCC1, UV REPAIR DEFICIENT 7 0.67 0.33 -0.32
57 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.67 0.29 -0.29
58 AT3G27670 ARM repeat superfamily protein RESURRECTION1 0.67 0.33 -0.32
59 AT4G32620 Enhancer of polycomb-like transcription factor protein 0.67 0.32 -0.3
60 AT2G20100 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.67 0.3 -0.32
61 AT5G37890 Protein with RING/U-box and TRAF-like domains -0.67 0.31 -0.31
62 AT3G24740 Protein of unknown function (DUF1644) 0.67 0.31 -0.29
63 AT1G02080 transcription regulators 0.67 0.31 -0.3
64 AT5G67450 zinc-finger protein 1 zinc-finger protein 1, zinc-finger
protein 1		 -0.67 0.31 -0.29
65 AT1G76300 snRNP core protein SMD3 snRNP core protein SMD3 -0.67 0.31 -0.32
66 AT5G11700 LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: glycine-rich protein
(TAIR:AT4G32920.3); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.67 0.31 -0.3
67 AT4G16265 RNA polymerases M/15 Kd subunit NRPB9B, NRPD9B, NRPE9B -0.66 0.33 -0.31
68 AT2G44370 Cysteine/Histidine-rich C1 domain family protein -0.66 0.32 -0.31
69 AT2G27720 60S acidic ribosomal protein family -0.66 0.33 -0.33
70 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.66 0.31 -0.31
71 AT2G24490 replicon protein A2 ATRPA2, ATRPA32A, SUPPRESSOR OF
ROS1, replicon protein A2, RPA32A		 -0.66 0.34 -0.31
72 AT4G32605 Mitochondrial glycoprotein family protein -0.66 0.31 -0.32
73 AT1G13470 Protein of unknown function (DUF1262) -0.65 0.32 -0.32
74 AT1G15890 Disease resistance protein (CC-NBS-LRR class) family -0.65 0.31 -0.32
75 AT1G17340 Phosphoinositide phosphatase family protein 0.65 0.33 -0.32
76 AT5G28280 pseudogene, sterol desaturase domain-containing protein,
CER1-like, A.thaliana, ATCER1L19; blastp match of 55%
identity and 8.9e-22 P-value to
GP|4769012|gb|AAD29719.1|AF143746_1|AF143746 CER1 {Oryza
sativa}		 -0.65 0.33 -0.31
77 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 -0.65 0.29 -0.31
78 AT2G46930 Pectinacetylesterase family protein -0.65 0.32 -0.33
79 AT1G09815 polymerase delta 4 polymerase delta 4 -0.65 0.32 -0.3
80 AT1G68810 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.65 0.31 -0.31
81 AT1G50030 target of rapamycin target of rapamycin 0.65 0.31 -0.29
82 AT1G30490 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB9, PHAVOLUTA 0.65 0.31 -0.34
83 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 0.65 0.32 -0.32
84 AT4G36140 disease resistance protein (TIR-NBS-LRR class), putative 0.65 0.31 -0.32
85 AT2G28910 CAX interacting protein 4 CAX interacting protein 4 0.65 0.33 -0.33
86 AT4G19430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.65 0.32 -0.3
87 AT3G46220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2042 (InterPro:IPR018611); Has 559
Blast hits to 533 proteins in 154 species: Archae - 3;
Bacteria - 32; Metazoa - 305; Fungi - 42; Plants - 50;
Viruses - 3; Other Eukaryotes - 124 (source: NCBI BLink).		 0.65 0.33 -0.33
88 AT2G36960 TSL-kinase interacting protein 1 TSL-kinase interacting protein 1 0.65 0.31 -0.31
89 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.65 0.33 -0.32
90 AT3G50350 Protein of unknown function (DUF1685) -0.65 0.31 -0.31
91 AT2G26060 Transducin/WD40 repeat-like superfamily protein embryo defective 1345 -0.65 0.31 -0.33
92 AT5G25080 Sas10/Utp3/C1D family -0.65 0.3 -0.32
93 AT2G44430 DNA-binding bromodomain-containing protein 0.64 0.3 -0.32
94 AT4G24240 WRKY DNA-binding protein 7 ATWRKY7, WRKY DNA-binding protein
7		 -0.64 0.31 -0.31
95 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 0.64 0.31 -0.32
96 AT2G17110 Protein of unknown function (DUF630 and DUF632) 0.64 0.33 -0.31
97 AT2G33020 receptor like protein 24 receptor like protein 24, receptor
like protein 24		 0.64 0.32 -0.32
98 AT1G35620 PDI-like 5-2 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 8, PDI-like
5-2, PROTEIN DISULFIDE ISOMERASE
8, PDI-like 5-2		 -0.64 0.33 -0.31
99 AT4G34310 alpha/beta-Hydrolases superfamily protein 0.64 0.32 -0.34
100 AT3G24800 proteolysis 1 proteolysis 1 0.64 0.31 -0.3
101 AT5G02220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.64 0.32 -0.32
102 AT5G20380 phosphate transporter 4;5 phosphate transporter 4;5 0.64 0.32 -0.31
103 AT2G14520 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.64 0.33 -0.32
104 AT3G14570 glucan synthase-like 4 glucan synthase-like 4, atgsl4,
gsl04, glucan synthase-like 4		 0.64 0.31 -0.33
105 AT1G09290 unknown protein; Has 73 Blast hits to 71 proteins in 26
species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 11;
Plants - 54; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.63 0.32 -0.32
106 AT5G41600 VIRB2-interacting protein 3 VIRB2-interacting protein 3,
Reticulan like protein B4		 -0.63 0.3 -0.32
107 AT1G55910 zinc transporter 11 precursor zinc transporter 11 precursor -0.63 0.33 -0.31
108 AT5G40710 zinc finger (C2H2 type) family protein -0.63 0.31 -0.33
109 AT4G12490 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.63 0.31 -0.33
110 AT2G24970 unknown protein; Has 33 Blast hits to 33 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.63 0.34 -0.31
111 AT2G01120 origin recognition complex subunit 4 ORIGIN RECOGNITION COMPLEX SUBUNIT
4, origin recognition complex
subunit 4		 -0.63 0.33 -0.31
112 AT4G23570 phosphatase-related SGT1A -0.62 0.33 -0.32
113 AT1G34350 unknown protein; Has 192 Blast hits to 192 proteins in 79
species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi -
0; Plants - 60; Viruses - 0; Other Eukaryotes - 28 (source:
NCBI BLink).		 -0.62 0.3 -0.3
114 AT5G48870 Small nuclear ribonucleoprotein family protein SUPERSENSITIVE TO ABA AND DROUGHT
1		 -0.62 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
115 C0190 O-acetyl-L-Serine - O-acetyl-L-Serine cysteine biosynthesis I,
seleno-amino acid biosynthesis 		0.83 0.44 -0.44 C0190
116 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		0.82 0.41 -0.44 C0220