AGICode | AT4G31940 |
Description | cytochrome P450, family 82, subfamily C, polypeptide 4 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G31940 | cytochrome P450, family 82, subfamily C, polypeptide 4 | cytochrome P450, family 82, subfamily C, polypeptide 4 |
1 | 0.34 | -0.31 | ||
2 | ATMG00150 | hypothetical protein | ORF116 | -0.68 | 0.32 | -0.32 | ||
3 | ATMG00110 | cytochrome C biogenesis 206 | ATP-binding cassette I2, cytochrome C biogenesis 206 |
-0.65 | 0.32 | -0.31 | ||
4 | AT4G11745 | Galactose oxidase/kelch repeat superfamily protein | 0.65 | 0.32 | -0.34 | |||
5 | AT5G40260 | Nodulin MtN3 family protein | AtSWEET8, SWEET8 | 0.65 | 0.32 | -0.33 | ||
6 | AT3G43950 | Protein kinase superfamily protein | -0.64 | 0.31 | -0.33 | |||
7 | AT2G41620 | Nucleoporin interacting component (Nup93/Nic96-like) family protein |
0.63 | 0.32 | -0.32 | |||
8 | AT3G20020 | protein arginine methyltransferase 6 | ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 6, protein arginine methyltransferase 6 |
0.63 | 0.32 | -0.31 | ||
9 | AT2G32630 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.62 | 0.34 | -0.31 | |||
10 | AT1G21730 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.62 | 0.29 | -0.31 | |||
11 | AT5G46400 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT PRP39-2, PRP39-2 | 0.61 | 0.31 | -0.32 | ||
12 | AT4G22800 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.31 | -0.3 | |||
13 | AT3G60540 | Preprotein translocase Sec, Sec61-beta subunit protein | -0.6 | 0.3 | -0.31 | |||
14 | AT5G09920 | RNA polymerase II, Rpb4, core protein | ATRPB15.9, NRPB4, RPB15.9, RPB15.9.9 |
-0.6 | 0.29 | -0.3 | ||
15 | AT1G17890 | NAD(P)-binding Rossmann-fold superfamily protein | GER2 | -0.6 | 0.33 | -0.32 | ||
16 | AT4G37740 | growth-regulating factor 2 | growth-regulating factor 2, growth-regulating factor 2 |
0.59 | 0.32 | -0.32 | ||
17 | AT3G27570 | Sucrase/ferredoxin-like family protein | -0.59 | 0.31 | -0.33 | |||
18 | AT5G61360 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07730.1); Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.59 | 0.33 | -0.31 | |||
19 | AT1G31940 | unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.32 | -0.31 | |||
20 | AT2G07300 | transposable element gene | -0.58 | 0.33 | -0.32 | |||
21 | AT3G54120 | Reticulon family protein | -0.58 | 0.33 | -0.31 | |||
22 | AT5G10880 | tRNA synthetase-related / tRNA ligase-related | 0.58 | 0.31 | -0.3 | |||
23 | AT4G18590 | Nucleic acid-binding, OB-fold-like protein | 0.57 | 0.3 | -0.31 | |||
24 | AT2G25780 | Protein of unknown function (DUF1677) | -0.57 | 0.31 | -0.32 | |||
25 | AT4G36560 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.32 | -0.33 | |||
26 | AT4G01700 | Chitinase family protein | -0.57 | 0.3 | -0.33 | |||
27 | AT1G27960 | evolutionarily conserved C-terminal region 9 | evolutionarily conserved C-terminal region 9 |
0.57 | 0.33 | -0.3 | ||
28 | AT3G12630 | A20/AN1-like zinc finger family protein | stress associated protein 5 | -0.57 | 0.31 | -0.31 | ||
29 | AT1G24030 | Protein kinase superfamily protein | 0.57 | 0.32 | -0.31 | |||
30 | AT2G44990 | carotenoid cleavage dioxygenase 7 | ATCCD7, carotenoid cleavage dioxygenase 7, MAX3 |
0.57 | 0.31 | -0.32 | ||
31 | AT3G08700 | ubiquitin-conjugating enzyme 12 | ubiquitin-conjugating enzyme 12 | 0.56 | 0.29 | -0.31 | ||
32 | AT5G16460 | Putative adipose-regulatory protein (Seipin) | 0.55 | 0.3 | -0.31 | |||
33 | AT1G50090 | D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein |
-0.55 | 0.3 | -0.32 | |||
34 | AT4G22030 | F-box family protein with a domain of unknown function (DUF295) |
0.55 | 0.31 | -0.32 | |||
35 | AT2G17710 | unknown protein; Has 39 Blast hits to 39 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.34 | -0.33 | |||
36 | AT3G57460 | catalytics;metal ion binding | -0.55 | 0.32 | -0.31 | |||
37 | AT1G04380 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.55 | 0.31 | -0.32 | |||
38 | AT1G23220 | Dynein light chain type 1 family protein | -0.55 | 0.31 | -0.33 | |||
39 | AT4G32270 | Ubiquitin-like superfamily protein | 0.55 | 0.33 | -0.33 | |||
40 | AT1G23820 | spermidine synthase 1 | spermidine synthase 1 | -0.55 | 0.32 | -0.33 | ||
41 | AT5G51660 | cleavage and polyadenylation specificity factor 160 | ATCPSF160, cleavage and polyadenylation specificity factor 160 |
0.54 | 0.33 | -0.31 | ||
42 | AT2G02090 | SNF2 domain-containing protein / helicase domain-containing protein |
CHA19, CHROMATIN REMODELING 19, ETL1 |
0.54 | 0.34 | -0.31 | ||
43 | AT4G37050 | PATATIN-like protein 4 | phospholipase A IVC, PLA V, patatin-related phospholipase III beta, PATATIN-like protein 4 |
0.54 | 0.32 | -0.32 | ||
44 | AT1G54560 | Myosin family protein with Dil domain | MYOSIN XI E, XIE | -0.53 | 0.32 | -0.3 | ||
45 | AT3G43170 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT5G54330.1); Has 90 Blast hits to 90 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.33 | -0.32 | |||
46 | AT4G13700 | purple acid phosphatase 23 | ATPAP23, purple acid phosphatase 23 |
0.53 | 0.33 | -0.29 | ||
47 | AT1G18570 | myb domain protein 51 | myb domain protein 51, BW51A, BW51B, HIGH INDOLIC GLUCOSINOLATE 1, myb domain protein 51 |
-0.53 | 0.33 | -0.32 | ||
48 | AT1G62670 | rna processing factor 2 | rna processing factor 2 | 0.53 | 0.31 | -0.33 | ||
49 | AT1G50380 | Prolyl oligopeptidase family protein | 0.53 | 0.31 | -0.3 | |||
50 | AT4G28010 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.53 | 0.33 | -0.31 | |||
51 | AT5G62120 | response regulator 23 | response regulator 23, response regulator 23 |
0.53 | 0.31 | -0.29 | ||
52 | AT1G68710 | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein |
0.53 | 0.34 | -0.32 | |||
53 | AT3G04590 | AT hook motif DNA-binding family protein | -0.52 | 0.33 | -0.32 | |||
54 | AT1G10180 | BEST Arabidopsis thaliana protein match is: exocyst complex component 84B (TAIR:AT5G49830.1); Has 132 Blast hits to 132 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
0.52 | 0.33 | -0.33 | |||
55 | AT4G11020 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.52 | 0.31 | -0.32 | |||
56 | AT4G08670 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.52 | 0.3 | -0.31 | |||
57 | AT3G07960 | Phosphatidylinositol-4-phosphate 5-kinase family protein | phosphatidylinositol-4-phosphate 5-kinase 6 |
0.52 | 0.32 | -0.33 | ||
58 | AT1G08050 | Zinc finger (C3HC4-type RING finger) family protein | -0.52 | 0.32 | -0.31 | |||
59 | AT2G26720 | Cupredoxin superfamily protein | -0.51 | 0.33 | -0.32 | |||
60 | AT4G21800 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
quatre-quart2 | -0.51 | 0.3 | -0.32 | ||
61 | AT1G08210 | Eukaryotic aspartyl protease family protein | 0.51 | 0.3 | -0.3 | |||
62 | AT4G38230 | calcium-dependent protein kinase 26 | ARABIDOPSIS THALIANA CALCIUM-DEPENDENT PROTEIN KINASE 26, calcium-dependent protein kinase 26 |
-0.5 | 0.32 | -0.3 | ||
63 | AT4G07480 | transposable element gene | -0.5 | 0.32 | -0.32 | |||
64 | AT4G30200 | vernalization5/VIN3-like | vernalization5/VIN3-like 1, VIN3-Like 2 |
0.5 | 0.32 | -0.32 | ||
65 | AT1G45100 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.5 | 0.34 | -0.32 | |||
66 | AT4G23280 | cysteine-rich RLK (RECEPTOR-like protein kinase) 20 | cysteine-rich RLK (RECEPTOR-like protein kinase) 20 |
-0.5 | 0.31 | -0.31 | ||
67 | AT2G28560 | DNA repair (Rad51) family protein | ATRAD51B, RAD51B | 0.5 | 0.3 | -0.32 | ||
68 | AT3G18570 | Oleosin family protein | 0.5 | 0.34 | -0.33 | |||
69 | AT5G40030 | Protein kinase superfamily protein | 0.5 | 0.31 | -0.32 | |||
70 | AT3G30400 | transposable element gene | -0.5 | 0.32 | -0.32 | |||
71 | AT5G64930 | CPR5 protein, putative | CONSTITUTIVE EXPRESSION OF PR GENES 5, HYPERSENESCENCE 1 |
-0.5 | 0.33 | -0.34 | ||
72 | AT4G39130 | Dehydrin family protein | 0.5 | 0.31 | -0.29 | |||
73 | AT1G74900 | Pentatricopeptide repeat (PPR) superfamily protein | organelle transcript processing defect 43 |
0.5 | 0.3 | -0.32 | ||
74 | AT1G64780 | ammonium transporter 1;2 | ammonium transporter 1;2, ammonium transporter 1;2 |
0.5 | 0.31 | -0.3 | ||
75 | AT1G11340 | S-locus lectin protein kinase family protein | -0.5 | 0.3 | -0.32 | |||
76 | AT3G59845 | Zinc-binding dehydrogenase family protein | -0.5 | 0.3 | -0.32 | |||
77 | AT5G63900 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain |
-0.49 | 0.32 | -0.31 | |||
78 | AT3G55550 | Concanavalin A-like lectin protein kinase family protein | -0.49 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
79 | C0056 | AMP | - | AMP | PRPP biosynthesis I, fatty acid biosynthesis (plant mitochondria), adenine and adenosine salvage VI, biotin-carboxyl carrier protein assembly, molybdenum cofactor biosynthesis II (eukaryotes), gluconeogenesis I, adenine and adenosine salvage II, asparagine biosynthesis I, L-glutamine biosynthesis II (tRNA-dependent), trans-cinnamoyl-CoA biosynthesis, IAA degradation V, ethanol degradation II (cytosol), arginine biosynthesis I, IAA degradation IV, fatty acid activation, selenate reduction, IAA biosynthesis VII, 4-hydroxybenzoate biosynthesis V, tetrapyrrole biosynthesis I, flavonoid biosynthesis, indole-3-acetyl-amino acid biosynthesis, glutamine biosynthesis III, ethanol degradation IV (peroxisomal), glycolysis I, asparagine biosynthesis III (tRNA-dependent), jasmonoyl-amino acid conjugates biosynthesis I, molybdenum cofactor biosynthesis, pyridine nucleotide cycling (plants), scopoletin biosynthesis, jasmonic acid biosynthesis, adenosine nucleotides degradation I, fatty acid beta-oxidation II (core pathway), simple coumarins biosynthesis, sulfate reduction II (assimilatory), pantothenate biosynthesis, sporopollenin precursor biosynthesis, urea cycle, thiamine biosynthesis II, starch degradation II, NAD biosynthesis I (from aspartate), citrulline-nitric oxide cycle, beta-alanine biosynthesis II, arginine biosynthesis II (acetyl cycle), suberin biosynthesis, linoleate biosynthesis I (plants), trans-zeatin biosynthesis, tetrahydrofolate biosynthesis II, purine nucleotides de novo biosynthesis II, phenylpropanoid biosynthesis, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I, purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging |
0.72 | 0.44 | -0.47 | ||
80 | C0006 | β-Homothreonine | L-β-Homothreonine | - | - | 0.68 | 0.45 | -0.44 | ||
81 | C0027 | 2-Oxoglutaric acid | - | α-Ketoglutarate | gibberellin biosynthesis III (early C-13 hydroxylation), leucopelargonidin and leucocyanidin biosynthesis, aspartate degradation II, ornithine biosynthesis, isoleucine biosynthesis I (from threonine), pantothenate biosynthesis, phenylalanine degradation III, flavonol biosynthesis, lysine biosynthesis VI, luteolin biosynthesis, ammonia assimilation cycle II, serine biosynthesis, flavonoid biosynthesis, glutamate biosynthesis V, aspartate biosynthesis, glutamate degradation I, gibberellin inactivation I (2beta-hydroxylation), alanine degradation III, photorespiration, valine biosynthesis, glycine biosynthesis, arginine biosynthesis II (acetyl cycle), arginine degradation I (arginase pathway), gibberellin biosynthesis II (early C-3 hydroxylation), leucine biosynthesis, glutamate biosynthesis IV, tyrosine biosynthesis II, proline biosynthesis III, citrulline biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), L-Ndelta-acetylornithine biosynthesis, isoleucine degradation I, alanine biosynthesis II, tyrosine biosynthesis I, TCA cycle variation III (eukaryotic), leucine degradation I, alanine degradation II (to D-lactate), TCA cycle variation V (plant), arginine degradation VI (arginase 2 pathway), valine degradation I, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), 2-ketoglutarate dehydrogenase complex, glutamate degradation IV, tyrosine degradation I, anthocyanin biosynthesis (delphinidin 3-O-glucoside), IAA biosynthesis I, phenylalanine biosynthesis II, lysine degradation II, scopoletin biosynthesis, 4-hydroxyphenylpyruvate biosynthesis, histidine biosynthesis, glutamine biosynthesis III, leucodelphinidin biosynthesis |
0.65 | 0.44 | -0.44 | ||
82 | C0218 | Pyridoxamine phosphate | Pyridoxamine-5'-phosphate | Pyridoxamine-5'-phosphate | pyridoxal 5'-phosphate salvage pathway | 0.64 | 0.31 | -0.31 | ||
83 | C0066 | Choline | - | Choline | choline biosynthesis III, phosphatidylcholine biosynthesis I, choline biosynthesis I, glycine betaine biosynthesis III (plants), choline biosynthesis II, sinapate ester biosynthesis, phospholipases |
0.57 | 0.32 | -0.31 | ||
84 | C0062 | Betain | - | - | - | 0.56 | 0.3 | -0.31 | ||
85 | C0113 | Histidinol | - | Histidinol | histidine biosynthesis | 0.52 | 0.32 | -0.33 |