AT4G30310 : -
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AGICode AT4G30310
Description FGGY family of carbohydrate kinase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G30310 FGGY family of carbohydrate kinase 1 0.3 -0.33
2 AT3G09150 phytochromobilin:ferredoxin oxidoreductase, chloroplast /
phytochromobilin synthase (HY2)
ARABIDOPSIS ELONGATED HYPOCOTYL 2,
GENOMES UNCOUPLED 3, ELONGATED
HYPOCOTYL 2
0.76 0.31 -0.31
3 AT3G60810 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1499 (InterPro:IPR010865); Has 444
Blast hits to 444 proteins in 143 species: Archae - 0;
Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51;
Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).
0.74 0.32 -0.31
4 AT5G11380 1-deoxy-D-xylulose 5-phosphate synthase 3 1-deoxy-D-xylulose 5-phosphate
synthase 3
0.74 0.29 -0.31
5 AT1G25290 RHOMBOID-like protein 10 RHOMBOID-like protein 10,
RHOMBOID-like protein 10
0.72 0.33 -0.32
6 AT2G41760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function WDYHV (InterPro:IPR019161); Has 201 Blast
hits to 201 proteins in 90 species: Archae - 0; Bacteria -
2; Metazoa - 132; Fungi - 10; Plants - 30; Viruses - 0;
Other Eukaryotes - 27 (source: NCBI BLink).
0.72 0.34 -0.35
7 AT3G54860 Sec1/munc18-like (SM) proteins superfamily ATVPS33, VACUOLAR PROTEIN SORTING
33
0.71 0.31 -0.28
8 AT1G18850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 40 Blast hits to 40 proteins
in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).
-0.71 0.33 -0.29
9 AT4G16770 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein
0.69 0.31 -0.3
10 AT3G53950 glyoxal oxidase-related protein 0.69 0.3 -0.32
11 AT4G29220 phosphofructokinase 1 phosphofructokinase 1 0.69 0.29 -0.31
12 AT2G26540 uroporphyrinogen-III synthase family protein DOMAIN OF UNKNOWN FUNCTION 724 3,
ARABIDOPSIS THALIANA
UROPORPHYRINOGEN III SYNTHASE,
DOMAIN OF UNKNOWN FUNCTION 724 3,
HEMD, UROPORPHYRINOGEN III
SYNTHASE
0.68 0.32 -0.33
13 AT2G43750 O-acetylserine (thiol) lyase B ARABIDOPSIS CYSTEINE SYNTHASE 1,
ARABIDOPSIS THALIANA CYSTEIN
SYNTHASE-B, CHLOROPLAST
O-ACETYLSERINE SULFHYDRYLASE 1,
O-acetylserine (thiol) lyase B
0.68 0.31 -0.31
14 AT4G32320 ascorbate peroxidase 6 ascorbate peroxidase 6 0.68 0.31 -0.3
15 AT1G28320 protease-related DEG15 0.67 0.33 -0.32
16 AT4G25730 FtsJ-like methyltransferase family protein -0.67 0.3 -0.3
17 AT5G03420 5'-AMP-activated protein kinase-related 0.67 0.3 -0.31
18 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 0.67 0.32 -0.32
19 AT5G13740 zinc induced facilitator 1 zinc induced facilitator 1 0.66 0.3 -0.34
20 AT3G62270 HCO3- transporter family -0.66 0.33 -0.33
21 AT5G59240 Ribosomal protein S8e family protein -0.66 0.3 -0.32
22 AT5G49970 pyridoxin (pyrodoxamine) 5'-phosphate oxidase pyridoxin (pyrodoxamine)
5'-phosphate oxidase, HOMOLOG OF
YEAST PYRIDOXINE AUXOTROPHY 3,
pyridoxin (pyrodoxamine)
5'-phosphate oxidase
0.66 0.33 -0.33
23 AT5G06130 chaperone protein dnaJ-related 0.66 0.3 -0.32
24 AT3G13940 DNA binding;DNA-directed RNA polymerases -0.65 0.3 -0.32
25 AT5G11910 alpha/beta-Hydrolases superfamily protein 0.65 0.31 -0.34
26 AT4G36910 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 1,
CYSTATHIONE [BETA]-SYNTHASE
DOMAIN-CONTAINING PROTEIN 2, LOSS
OF THE TIMING OF ET AND JA
BIOSYNTHESIS 2
0.65 0.31 -0.32
27 AT1G03030 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.65 0.33 -0.3
28 AT5G53400 HSP20-like chaperones superfamily protein BOBBER1 -0.65 0.33 -0.34
29 AT3G56460 GroES-like zinc-binding alcohol dehydrogenase family
protein
0.65 0.29 -0.31
30 AT4G33460 ABC transporter family protein ATP-binding cassette I10, ATNAP13,
embryo defective 2751
0.64 0.33 -0.33
31 AT1G15420 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12
(InterPro:IPR007148); Has 764 Blast hits to 656 proteins in
193 species: Archae - 0; Bacteria - 42; Metazoa - 237;
Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes -
223 (source: NCBI BLink).
-0.64 0.33 -0.33
32 AT3G26410 methyltransferases;nucleic acid binding AtTRM11, tRNA modification 11 -0.64 0.28 -0.31
33 AT5G15550 Transducin/WD40 repeat-like superfamily protein -0.64 0.34 -0.32
34 AT1G14350 Duplicated homeodomain-like superfamily protein myb domain protein 124, FOUR LIPS,
MYB124
-0.64 0.3 -0.33
35 AT1G54920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).
0.64 0.32 -0.33
36 AT2G22740 SU(VAR)3-9 homolog 6 SET DOMAIN PROTEIN 23, SU(VAR)3-9
homolog 6
0.64 0.31 -0.31
37 AT5G06110 DnaJ domain ;Myb-like DNA-binding domain -0.64 0.32 -0.32
38 AT2G40700 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
-0.63 0.33 -0.31
39 AT5G42060 DEK, chromatin associated protein -0.63 0.31 -0.34
40 AT3G47000 Glycosyl hydrolase family protein 0.63 0.33 -0.3
41 AT5G50110 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein
0.63 0.31 -0.32
42 AT1G79470 Aldolase-type TIM barrel family protein -0.63 0.3 -0.33
43 AT1G26660 Prefoldin chaperone subunit family protein -0.62 0.31 -0.3
44 AT3G07770 HEAT SHOCK PROTEIN 89.1 HEAT SHOCK PROTEIN 90-6, HEAT
SHOCK PROTEIN 90.6, HEAT SHOCK
PROTEIN 89.1
-0.62 0.31 -0.32
45 AT5G51020 crumpled leaf constitutive activator of
AAA-ATPase, CRUMPLED LEAF
0.61 0.32 -0.31
46 AT3G06580 Mevalonate/galactokinase family protein GALACTOSE KINASE 1, GALK 0.61 0.29 -0.33
47 AT4G33510 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase 3-deoxy-d-arabino-heptulosonate
7-phosphate synthase
0.61 0.31 -0.32
48 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107
-0.61 0.31 -0.3
49 AT4G01026 PYR1-like 7 PYR1-like 7, regulatory components
of ABA receptor 2
0.61 0.32 -0.31
50 AT1G18880 Major facilitator superfamily protein nitrate transporter 1.9 -0.61 0.32 -0.31
51 AT2G16570 GLN phosphoribosyl pyrophosphate amidotransferase 1 GLN phosphoribosyl pyrophosphate
amidotransferase 1, ATASE, GLN
phosphoribosyl pyrophosphate
amidotransferase 1
-0.61 0.32 -0.32
52 AT2G32040 Major facilitator superfamily protein 0.6 0.34 -0.3
53 AT1G02475 Polyketide cyclase/dehydrase and lipid transport
superfamily protein
0.6 0.3 -0.3
54 AT4G25320 AT hook motif DNA-binding family protein -0.6 0.31 -0.31
55 AT5G13680 IKI3 family protein ABA-OVERLY SENSITIVE 1, AtELP1,
ELONGATA 2
-0.6 0.32 -0.33
56 AT3G50720 Protein kinase superfamily protein 0.59 0.31 -0.3
57 AT2G45170 AUTOPHAGY 8E AUTOPHAGY 8E, AUTOPHAGY 8E 0.59 0.31 -0.33
58 AT4G18230 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Oligosaccharide biosynthesis protein Alg14 like
(InterPro:IPR013969); Has 640 Blast hits to 640 proteins in
277 species: Archae - 4; Bacteria - 281; Metazoa - 94;
Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes -
77 (source: NCBI BLink).
0.59 0.3 -0.31
59 AT3G18930 RING/U-box superfamily protein 0.59 0.31 -0.32
60 AT2G30540 Thioredoxin superfamily protein 0.59 0.31 -0.3
61 AT2G19580 tetraspanin2 tetraspanin2 -0.58 0.31 -0.31
62 AT1G71380 cellulase 3 cellulase 3, ARABIDOPSIS THALIANA
GLYCOSYL HYDROLASE 9B3, cellulase
3
-0.58 0.31 -0.32
63 AT4G17350 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region
-0.56 0.32 -0.31
64 AT2G41780 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
-0.56 0.3 -0.34
65 AT1G69180 Plant-specific transcription factor YABBY family protein CRABS CLAW -0.56 0.33 -0.33
66 AT5G60120 target of early activation tagged (EAT) 2 target of early activation tagged
(EAT) 2
-0.55 0.31 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
67 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis 0.73 0.44 -0.44
68 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II
0.68 0.45 -0.46 C0186
69 C0239 Spermidine - Spermidine spermine biosynthesis,
spermine and spermidine degradation III,
beta-alanine biosynthesis I,
hypusine biosynthesis,
spermidine hydroxycinnamic acid conjugates biosynthesis,
spermidine biosynthesis I
-0.64 0.46 -0.44 C0239