AT4G30410 : -
Query Information
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AGICode AT4G30410
Description sequence-specific DNA binding transcription factors
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G30410 sequence-specific DNA binding transcription factors 1 0.33 -0.32
2 AT5G02550 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.75 0.32 -0.36
3 AT2G32560 F-box family protein 0.73 0.3 -0.3
4 AT3G12610 Leucine-rich repeat (LRR) family protein DNA-DAMAGE REPAIR/TOLERATION 100 0.72 0.31 -0.34
5 AT3G02170 longifolia2 LONGIFOLIA2 0.7 0.33 -0.32
6 AT1G48330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits
to 40 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.31 -0.34
7 AT5G15160 BANQUO 2 BASIC HELIX-LOOP-HELIX PROTEIN
134, BANQUO 2		 0.68 0.32 -0.33
8 AT4G16515 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 6 0.67 0.34 -0.32
9 AT5G02260 expansin A9 ATEXP9, expansin A9, ATHEXP ALPHA
1.10, EXP9, expansin A9		 0.66 0.31 -0.32
10 AT3G01490 Protein kinase superfamily protein 0.66 0.31 -0.33
11 AT5G12940 Leucine-rich repeat (LRR) family protein 0.65 0.32 -0.29
12 ATMG00060 NADH dehydrogenase subunit 5C NADH DEHYDROGENASE SUBUNIT 5, NADH
DEHYDROGENASE SUBUNIT 5.3, NADH
dehydrogenase subunit 5C		 -0.65 0.35 -0.32
13 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 -0.64 0.31 -0.32
14 AT1G63060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: petal, leaf whorl, male
gametophyte, flower; EXPRESSED DURING: L mature pollen
stage, M germinated pollen stage, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G07330.1); Has 42 Blast hits to 42 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.34 -0.3
15 AT5G25430 HCO3- transporter family 0.64 0.3 -0.32
16 AT4G18920 Protein of unknown function (DUF1264) 0.64 0.3 -0.34
17 AT3G17330 evolutionarily conserved C-terminal region 6 evolutionarily conserved
C-terminal region 6		 0.63 0.3 -0.3
18 AT3G52310 ABC-2 type transporter family protein ATP-binding cassette G27 -0.63 0.31 -0.32
19 AT1G45160 Protein kinase superfamily protein -0.63 0.32 -0.32
20 AT1G36910 transposable element gene 0.63 0.34 -0.32
21 AT4G11950 Protein of unknown function (DUF1191) -0.63 0.32 -0.31
22 AT2G17845 NAD(P)-binding Rossmann-fold superfamily protein -0.63 0.3 -0.29
23 AT3G07990 serine carboxypeptidase-like 27 serine carboxypeptidase-like 27 0.63 0.29 -0.3
24 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein -0.62 0.32 -0.32
25 AT3G50250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G19270.1); Has 6 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.61 0.31 -0.33
26 AT1G11000 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 4,
MILDEW RESISTANCE LOCUS O 4		 0.61 0.31 -0.32
27 AT1G58170 Disease resistance-responsive (dirigent-like protein)
family protein		 0.61 0.31 -0.31
28 AT1G11040 HSP40/DnaJ peptide-binding protein 0.61 0.31 -0.32
29 AT3G43760 transposable element gene -0.61 0.29 -0.3
30 AT1G26170 ARM repeat superfamily protein -0.6 0.31 -0.29
31 AT1G61420 S-locus lectin protein kinase family protein -0.6 0.29 -0.35
32 AT2G14380 transposable element gene 0.6 0.33 -0.34
33 AT5G06100 myb domain protein 33 ATMYB33, myb domain protein 33 -0.6 0.32 -0.3
34 AT1G67940 non-intrinsic ABC protein 3 ATP-binding cassette I17,
non-intrinsic ABC protein 3,
AtSTAR1, ARABIDOPSIS THALIANA
NON-INTRINSIC ABC PROTEIN 3,
non-intrinsic ABC protein 3		 0.6 0.32 -0.32
35 AT5G10880 tRNA synthetase-related / tRNA ligase-related -0.6 0.33 -0.29
36 AT1G19485 Transducin/WD40 repeat-like superfamily protein -0.6 0.31 -0.32
37 AT1G64570 Homeodomain-like superfamily protein DUO POLLEN 3 -0.6 0.31 -0.31
38 AT1G02740 MRG family protein 0.59 0.33 -0.29
39 AT2G21000 transposable element gene 0.59 0.32 -0.31
40 AT1G02100 Leucine carboxyl methyltransferase SUPPRESSOR OF BRI1 -0.59 0.32 -0.34
41 AT3G21400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; Has 29 Blast hits to 29 proteins in 12 species:
Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants -
27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.32 -0.34
42 AT5G59130 Subtilase family protein 0.59 0.33 -0.31
43 AT3G57820 60S ribosomal protein L21 (RPL21F), pseudogene, 60S
RIBOSOMAL PROTEIN L21 - Arabidopsis thaliana,
SWISSPROT:RL21_ARATH; blastp match of 75% identity and
2.5e-15 P-value to GP|3885884|gb|AAC78102.1||AF093630 60S
ribosomal protein L21 {Oryza sativa}		 0.59 0.3 -0.35
44 AT4G01790 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.59 0.3 -0.32
45 AT5G24010 Protein kinase superfamily protein -0.59 0.3 -0.31
46 AT2G17710 unknown protein; Has 39 Blast hits to 39 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.58 0.33 -0.32
47 AT4G19440 Tetratricopeptide repeat (TPR)-like superfamily protein -0.58 0.35 -0.3
48 AT5G25370 phospholipase D alpha 3 phospholipase D alpha 3 0.58 0.31 -0.29
49 AT2G41520 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 15 -0.58 0.32 -0.31
50 AT1G70570 anthranilate phosphoribosyltransferase, putative -0.57 0.3 -0.31
51 AT1G64670 alpha/beta-Hydrolases superfamily protein BODYGUARD1, 9-CIS EPOXYCAROTENOID
DIOXYGENASE DEFECTIVE 1		 0.57 0.32 -0.31
52 AT1G35183 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.57 0.31 -0.31
53 AT5G55160 small ubiquitin-like modifier 2 ATSUMO2, SMALL UBIQUITIN-LIKE
MODIFIER 2, SMALL UBIQUITIN-LIKE
MODIFIER 2, small ubiquitin-like
modifier 2		 0.57 0.31 -0.3
54 AT2G16820 transposable element gene 0.57 0.3 -0.33
55 AT2G30690 Protein of unknown function, DUF593 0.56 0.32 -0.32
56 AT2G47830 Cation efflux family protein -0.56 0.32 -0.32
57 AT5G51710 K+ efflux antiporter 5 ARABIDOPSIS THALIANA K+ EFFLUX
ANTIPORTER 5, K+ efflux antiporter
5		 -0.56 0.32 -0.3
58 AT5G44970 Protein with RNI-like/FBD-like domains -0.56 0.3 -0.32
59 AT3G32060 transposable element gene 0.56 0.32 -0.3
60 AT5G28240 transposable element gene 0.56 0.32 -0.35
61 AT4G39410 WRKY DNA-binding protein 13 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 13, WRKY
DNA-binding protein 13		 0.56 0.31 -0.33
62 AT1G50530 BEST Arabidopsis thaliana protein match is:
Calcium-dependent lipid-binding (CaLB domain) family
protein (TAIR:AT1G50570.2); Has 10 Blast hits to 10
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.56 0.33 -0.31
63 AT5G09430 alpha/beta-Hydrolases superfamily protein 0.56 0.35 -0.31
64 AT3G03080 Zinc-binding dehydrogenase family protein -0.55 0.31 -0.32
65 AT3G50340 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G67020.1); Has 128 Blast hits
to 128 proteins in 39 species: Archae - 0; Bacteria - 46;
Metazoa - 0; Fungi - 3; Plants - 76; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.55 0.32 -0.31
66 AT3G42700 transposable element gene -0.55 0.31 -0.33
67 AT1G49270 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 7, proline-rich
extensin-like receptor kinase 7		 0.55 0.32 -0.31
68 AT4G16447 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.55 0.33 -0.32
69 AT5G50335 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.55 0.3 -0.31
70 AT1G21650 Preprotein translocase SecA family protein SECA2 -0.55 0.31 -0.31
71 AT2G24410 BEST Arabidopsis thaliana protein match is: SMAD/FHA
domain-containing protein (TAIR:AT3G20550.1); Has 194
Blast hits to 194 proteins in 92 species: Archae - 0;
Bacteria - 0; Metazoa - 118; Fungi - 33; Plants - 30;
Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).		 0.54 0.31 -0.3
72 AT3G53200 myb domain protein 27 myb domain protein 27, myb domain
protein 27		 0.54 0.3 -0.3
73 AT2G13760 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24380.1); Has 68 Blast hits
to 68 proteins in 20 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 4; Plants - 43; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 0.54 0.33 -0.31
74 AT1G53165 Protein kinase superfamily protein ATMAP4K ALPHA1 -0.54 0.33 -0.29
75 AT1G72630 ELF4-like 2 ELF4-like 2 0.54 0.32 -0.3
76 AT1G68330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G48780.1); Has 155 Blast hits
to 147 proteins in 23 species: Archae - 0; Bacteria - 0;
Metazoa - 19; Fungi - 3; Plants - 126; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.53 0.33 -0.34
77 AT2G25760 Protein kinase family protein -0.53 0.29 -0.33
78 AT3G22121 other RNA -0.53 0.33 -0.31
79 AT4G27910 SET domain protein 16 ATX4, SET domain protein 16 -0.53 0.31 -0.33
80 AT5G37710 alpha/beta-Hydrolases superfamily protein -0.53 0.29 -0.33
81 AT4G37340 cytochrome P450, family 81, subfamily D, polypeptide 3 cytochrome P450, family 81,
subfamily D, polypeptide 3		 -0.53 0.31 -0.31
82 AT5G52330 TRAF-like superfamily protein -0.53 0.29 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
83 C0028 3-Aminopiperidin-2-one (R,S)-3-Aminopiperidin-2-one - - -0.66 0.32 -0.32
84 C0060 Asparagine D,L-Asparagine L-Asparagine asparagine degradation I,
asparagine biosynthesis III (tRNA-dependent),
asparagine biosynthesis I,
tRNA charging,
cyanide detoxification II 		-0.56 0.33 -0.3 C0060