AT4G29770 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G29770
Description Target of trans acting-siR480/255.
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G29770 Target of trans acting-siR480/255. 1 0.33 -0.33
2 AT5G05750 DNAJ heat shock N-terminal domain-containing protein -0.61 0.31 -0.34
3 AT1G17545 Protein phosphatase 2C family protein 0.59 0.33 -0.32
4 AT5G65130 Integrase-type DNA-binding superfamily protein -0.58 0.31 -0.31
5 AT5G38630 cytochrome B561-1 cytochrome B561-1, cytochrome
B561-1		 -0.57 0.31 -0.31
6 AT5G23230 nicotinamidase 2 nicotinamidase 2 -0.57 0.32 -0.32
7 AT4G12840 Protein of unknown function (DUF707) -0.57 0.32 -0.31
8 AT5G27650 Tudor/PWWP/MBT superfamily protein -0.56 0.32 -0.31
9 AT1G64490 DEK, chromatin associated protein -0.56 0.32 -0.32
10 AT2G07110 BEST Arabidopsis thaliana protein match is: Ribosomal
protein S5 domain 2-like superfamily protein
(TAIR:AT3G46210.6); Has 82 Blast hits to 82 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.56 0.3 -0.31
11 AT5G36230 ARM repeat superfamily protein -0.55 0.3 -0.32
12 AT1G73200 Putative integral membrane protein conserved region
(DUF2404)		 -0.54 0.32 -0.33
13 AT5G41650 Lactoylglutathione lyase / glyoxalase I family protein -0.54 0.3 -0.31
14 AT5G26270 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.54 0.3 -0.32
15 AT5G16420 Pentatricopeptide repeat (PPR-like) superfamily protein -0.54 0.29 -0.31
16 AT1G65280 DNAJ heat shock N-terminal domain-containing protein -0.54 0.32 -0.32
17 AT1G28430 cytochrome P450, family 705, subfamily A, polypeptide 24 cytochrome P450, family 705,
subfamily A, polypeptide 24		 -0.53 0.32 -0.3
18 AT3G55390 Uncharacterised protein family (UPF0497) 0.53 0.34 -0.31
19 AT4G18540 unknown protein; Has 209 Blast hits to 205 proteins in 54
species: Archae - 0; Bacteria - 17; Metazoa - 2; Fungi -
150; Plants - 40; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.53 0.3 -0.3
20 AT1G57540 unknown protein; Has 29 Blast hits to 29 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.32 -0.3
21 AT1G59900 pyruvate dehydrogenase complex E1 alpha subunit pyruvate dehydrogenase complex E1
alpha subunit, pyruvate
dehydrogenase complex E1 alpha
subunit		 -0.52 0.31 -0.32
22 AT4G21170 Tetratricopeptide repeat (TPR)-like superfamily protein -0.52 0.31 -0.29
23 AT1G68370 Chaperone DnaJ-domain superfamily protein ALTERED RESPONSE TO GRAVITY 1 -0.52 0.35 -0.34
24 AT5G03530 RAB GTPase homolog C2A ATRAB, ATRAB ALPHA, ATRAB18B,
ARABIDOPSIS THALIANA RAB GTPASE
HOMOLOG C2A, RAB GTPase homolog
C2A		 -0.52 0.31 -0.32
25 AT4G23330 BEST Arabidopsis thaliana protein match is: eukaryotic
translation initiation factor 3A (TAIR:AT4G11420.1); Has 63
Blast hits to 55 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.52 0.31 -0.33
26 AT3G56440 homolog of yeast autophagy 18 (ATG18) D homolog of yeast autophagy 18
(ATG18) D, homolog of yeast
autophagy 18 (ATG18) D		 0.51 0.3 -0.28
27 AT5G54650 formin homology5 FORMIN HOMOLOGY 5, formin
homology5		 -0.51 0.3 -0.32
28 AT1G41900 transposable element gene 0.51 0.31 -0.31
29 AT1G52100 Mannose-binding lectin superfamily protein -0.5 0.34 -0.32
30 AT5G07060 CCCH-type zinc fingerfamily protein with RNA-binding domain MOS4-associated complex subunit 5C -0.5 0.3 -0.31
31 AT5G44270 TPX2 (targeting protein for Xklp2) protein family 0.5 0.33 -0.3
32 AT5G23570 XS domain-containing protein / XS zinc finger
domain-containing protein-related		 SUPPRESSOR OF GENE SILENCING 3,
SUPPRESSOR OF GENE SILENCING 3		 0.5 0.32 -0.33
33 AT1G01700 RHO guanyl-nucleotide exchange factor 2 ATROPGEF2, RHO guanyl-nucleotide
exchange factor 2		 0.5 0.32 -0.31
34 AT5G18840 Major facilitator superfamily protein 0.5 0.33 -0.34
35 AT5G38380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: membrane; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF6, transmembrane (InterPro:IPR000620); BEST
Arabidopsis thaliana protein match is: Cation efflux family
protein (TAIR:AT2G04620.1); Has 123 Blast hits to 121
proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa -
69; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes -
9 (source: NCBI BLink).		 -0.49 0.3 -0.32
36 AT4G13630 Protein of unknown function, DUF593 -0.49 0.34 -0.32
37 AT3G53710 ARF-GAP domain 6 ARF-GAP domain 6 -0.49 0.32 -0.33
38 AT1G54040 epithiospecifier protein epithiospecifier protein,
EPITHIOSPECIFYING SENESCENCE
REGULATOR, TASTY		 0.49 0.33 -0.31
39 AT4G09430 Disease resistance protein (TIR-NBS-LRR class) family -0.49 0.31 -0.31
40 AT2G37830 pseudogene, glycine-rich protein -0.49 0.32 -0.34
41 AT5G15980 Pentatricopeptide repeat (PPR) superfamily protein -0.49 0.29 -0.29
42 AT5G20810 SAUR-like auxin-responsive protein family 0.48 0.32 -0.3
43 AT4G13985 FBD-associated F-box protein FBD-associated F-box protein 0.48 0.3 -0.32
44 AT1G07540 TRF-like 2 TRF-like 2 -0.48 0.31 -0.32
45 AT2G30710 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.48 0.31 -0.34
46 AT1G61790 Oligosaccharyltransferase complex/magnesium transporter
family protein		 -0.47 0.3 -0.3
47 AT5G01980 RING/U-box superfamily protein -0.47 0.33 -0.31
48 AT4G23840 Leucine-rich repeat (LRR) family protein 0.47 0.34 -0.32
49 AT5G39990 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.47 0.3 -0.31
50 AT1G49245 Prefoldin chaperone subunit family protein -0.47 0.32 -0.33
51 AT2G25630 beta glucosidase 14 beta glucosidase 14 -0.47 0.33 -0.35
52 AT3G06360 arabinogalactan protein 27 arabinogalactan protein 27,
ARABINOGALACTAN PROTEIN 27		 0.47 0.32 -0.29
53 AT1G73840 hydroxyproline-rich glycoprotein family protein ENHANCED SILENCING PHENOTYPE 1 -0.46 0.3 -0.31
54 AT4G26920 START (StAR-related lipid-transfer) lipid-binding domain -0.46 0.31 -0.31
55 AT5G61320 cytochrome P450, family 89, subfamily A, polypeptide 3 cytochrome P450, family 89,
subfamily A, polypeptide 3		 -0.46 0.31 -0.29
56 AT1G58470 RNA-binding protein 1 RNA-binding protein 1, RNA-binding
protein 1		 -0.46 0.31 -0.33
57 AT1G70540 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 embryo sac development arrest 24 -0.46 0.31 -0.32
58 AT5G05070 DHHC-type zinc finger family protein -0.46 0.32 -0.34
59 AT1G65240 Eukaryotic aspartyl protease family protein 0.45 0.3 -0.34
60 AT5G10680 calmodulin-binding protein-related -0.45 0.3 -0.33
61 AT2G06660 transposable element gene -0.45 0.29 -0.33
62 AT2G43220 Cysteine/Histidine-rich C1 domain family protein -0.45 0.32 -0.3
63 AT1G52260 PDI-like 1-5 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 3, PDI-like
1-5, PROTEIN DISULFIDE ISOMERASE
3, PDI-like 1-5		 -0.45 0.32 -0.31
64 AT1G42410 transposable element gene 0.43 0.3 -0.31
65 AT3G17740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF1740
(InterPro:IPR013633); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G17712.1); Has 409 Blast
hits to 335 proteins in 133 species: Archae - 1; Bacteria -
0; Metazoa - 140; Fungi - 188; Plants - 42; Viruses - 0;
Other Eukaryotes - 38 (source: NCBI BLink).		 0.43 0.29 -0.35
66 AT3G17220 pectin methylesterase inhibitor 2 ATPMEI2, pectin methylesterase
inhibitor 2		 0.43 0.31 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
67 C0020 1-Aminocyclopropane-1-carboxylic acid - 1-Aminocyclopropane-1-carboxylate jasmonoyl-amino acid conjugates biosynthesis I,
ethylene biosynthesis I (plants),
methionine salvage pathway 		-0.72 0.42 -0.43 C0020
68 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis 		-0.62 0.44 -0.43 C0073
69 C0244 Sucrose D-Sucrose Sucrose stachyose biosynthesis,
fructan degradation,
stachyose degradation,
galactose degradation III,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
sucrose degradation III,
UDP-glucose biosynthesis (from sucrose),
ajugose biosynthesis II (galactinol-independent),
sucrose biosynthesis I 		-0.5 0.35 -0.3 C0244
70 C0223 Quercetin-3-O-β-glucopyranoside-7-O-α-rhamnospyranoide - Quercetin-3-O-glucoside-7-O-rhamnoside quercetin glucoside biosynthesis (Arabidopsis) -0.47 0.29 -0.32 C0223