AT4G28310 : -
Query Information
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AGICode AT4G28310
Description unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G28310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 1 0.32 -0.33
2 AT1G09200 Histone superfamily protein 0.89 0.31 -0.32
3 AT1G07370 proliferating cellular nuclear antigen 1 PROLIFERATING CELLULAR NUCLEAR
ANTIGEN 1, proliferating cellular
nuclear antigen 1		 0.89 0.32 -0.31
4 AT5G56710 Ribosomal protein L31e family protein 0.88 0.31 -0.31
5 AT5G08020 RPA70-kDa subunit B ARABIDOPSIS THALIANA RPA70-KDA
SUBUNIT B, RPA70-kDa subunit B		 0.87 0.32 -0.33
6 AT3G42660 transducin family protein / WD-40 repeat family protein 0.86 0.32 -0.3
7 AT5G65360 Histone superfamily protein 0.86 0.32 -0.32
8 AT4G31700 ribosomal protein S6 ribosomal protein S6, RPS6A 0.85 0.32 -0.3
9 AT5G19750 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.84 0.36 -0.3
10 AT4G02060 Minichromosome maintenance (MCM2/3/5) family protein MCM7, PROLIFERA 0.84 0.32 -0.31
11 AT1G24360 NAD(P)-binding Rossmann-fold superfamily protein 0.84 0.31 -0.31
12 AT5G61000 Replication factor-A protein 1-related ATRPA70D, RPA70D 0.84 0.32 -0.31
13 AT3G06500 Plant neutral invertase family protein alkaline/neutral invertase C -0.83 0.32 -0.33
14 AT5G46280 Minichromosome maintenance (MCM2/3/5) family protein MINICHROMOSOME MAINTENANCE 3 0.83 0.32 -0.32
15 AT2G36230 Aldolase-type TIM barrel family protein ALBINO AND PALE GREEN 10, HISN3 0.83 0.33 -0.3
16 AT5G10390 Histone superfamily protein 0.83 0.31 -0.33
17 AT5G59870 histone H2A 6 histone H2A 6 0.83 0.31 -0.33
18 AT3G13740 Ribonuclease III family protein 0.83 0.29 -0.3
19 AT3G54560 histone H2A 11 histone H2A 11 0.82 0.32 -0.29
20 AT3G53430 Ribosomal protein L11 family protein 0.82 0.32 -0.29
21 AT1G21690 ATPase family associated with various cellular activities
(AAA) 		embryo defective 1968, replication
factor C 4		 0.82 0.3 -0.31
22 AT5G52650 RNA binding Plectin/S10 domain-containing protein 0.82 0.35 -0.31
23 AT1G78280 transferases, transferring glycosyl groups -0.82 0.3 -0.31
24 AT3G48520 cytochrome P450, family 94, subfamily B, polypeptide 3 cytochrome P450, family 94,
subfamily B, polypeptide 3		 -0.82 0.31 -0.31
25 AT1G48460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.82 0.32 -0.33
26 AT5G43080 Cyclin A3;1 Cyclin A3;1 0.82 0.29 -0.32
27 AT5G11160 adenine phosphoribosyltransferase 5 adenine phosphoribosyltransferase
5		 0.82 0.32 -0.33
28 AT1G07450 NAD(P)-binding Rossmann-fold superfamily protein 0.81 0.32 -0.33
29 AT3G14740 RING/FYVE/PHD zinc finger superfamily protein 0.81 0.33 -0.33
30 AT1G60950 2Fe-2S ferredoxin-like superfamily protein FERREDOXIN 2, FED A 0.81 0.32 -0.33
31 AT3G10610 Ribosomal S17 family protein 0.81 0.33 -0.33
32 AT3G55010 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast
/ phosphoribosyl-aminoimidazole synthetase / AIR synthase
(PUR5)		 ATPURM, EMBRYO DEFECTIVE 2818,
PUR5		 0.81 0.31 -0.32
33 AT5G05000 translocon at the outer envelope membrane of chloroplasts
34		 ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER ENVELOPE MEMBRANE OF
CHLOROPLASTS 34, OEP34, translocon
at the outer envelope membrane of
chloroplasts 34		 0.81 0.32 -0.3
34 AT5G08415 Radical SAM superfamily protein 0.8 0.3 -0.31
35 AT4G08500 MAPK/ERK kinase kinase 1 ARAKIN, ATMEKK1, MAPKKK8, MAPK/ERK
kinase kinase 1		 -0.8 0.32 -0.3
36 AT2G48010 receptor-like kinase in in flowers 3 receptor-like kinase in in flowers
3		 -0.8 0.33 -0.3
37 AT5G22880 histone B2 HISTONE H2B, histone B2 0.8 0.3 -0.29
38 AT3G02920 Replication protein A, subunit RPA32 ATRPA32B, RPA32B 0.8 0.33 -0.34
39 AT1G21000 PLATZ transcription factor family protein -0.79 0.3 -0.34
40 AT3G10730 SAD1/UNC-84 domain protein 2 ARABIDOPSIS SAD1/UNC-84 DOMAIN
PROTEIN 2, SAD1/UNC-84 domain
protein 2		 0.79 0.31 -0.33
41 AT5G42050 DCD (Development and Cell Death) domain protein -0.79 0.31 -0.33
42 AT4G34390 extra-large GTP-binding protein 2 extra-large GTP-binding protein 2 -0.79 0.33 -0.33
43 AT5G05140 Transcription elongation factor (TFIIS) family protein -0.79 0.31 -0.33
44 AT4G29950 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.79 0.32 -0.32
45 AT2G21540 SEC14-like 3 SEC14-LIKE 3, SEC14-like 3 0.79 0.34 -0.33
46 AT5G35370 S-locus lectin protein kinase family protein -0.79 0.32 -0.33
47 AT1G21450 SCARECROW-like 1 SCARECROW-like 1 -0.79 0.29 -0.32
48 AT5G45700 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.79 0.31 -0.34
49 AT5G05180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G10880.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.79 0.34 -0.32
50 AT1G18090 5'-3' exonuclease family protein 0.79 0.29 -0.35
51 AT3G49670 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 2 0.78 0.31 -0.31
52 AT1G50575 Putative lysine decarboxylase family protein 0.78 0.32 -0.33
53 AT5G17630 Nucleotide/sugar transporter family protein 0.78 0.31 -0.32
54 AT2G25880 ataurora2 ataurora2, ataurora2 0.78 0.32 -0.35
55 AT3G15500 NAC domain containing protein 3 NAC domain containing protein 55,
NAC domain containing protein 3,
NAC domain containing protein 55,
NAC domain containing protein 3		 -0.78 0.29 -0.32
56 AT1G12360 Sec1/munc18-like (SM) proteins superfamily keule -0.78 0.32 -0.32
57 AT1G51060 histone H2A 10 histone H2A 10 0.78 0.33 -0.34
58 AT2G47950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root, flower; EXPRESSED
DURING: petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G62990.1); Has 22 Blast hits to 22 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.78 0.32 -0.32
59 AT1G10780 F-box/RNI-like superfamily protein 0.78 0.29 -0.34
60 AT5G19570 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0546
(InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 0.78 0.3 -0.3
61 AT1G48240 novel plant snare 12 ATNPSN12, novel plant snare 12 0.78 0.3 -0.31
62 AT2G19720 ribosomal protein S15A B ribosomal protein S15A B 0.78 0.3 -0.31
63 AT5G49160 methyltransferase 1 DECREASED DNA METHYLATION 2, DNA
METHYLTRANSFERASE 01, DNA
METHYLTRANSFERASE 1,
methyltransferase 1,
METHYLTRANSFERASE 2,
METHYLTRANSFERASE I		 0.78 0.32 -0.3
64 AT3G46940 DUTP-PYROPHOSPHATASE-LIKE 1 DUTP-PYROPHOSPHATASE-LIKE 1 0.78 0.31 -0.31
65 AT5G04040 Patatin-like phospholipase family protein SUGAR-DEPENDENT1 -0.78 0.3 -0.33
66 AT5G03120 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 14 Blast hits to 14
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.78 0.31 -0.32
67 AT3G08720 serine/threonine protein kinase 2 Arabidopsis thaliana protein
kinase 19, ARABIDOPSIS THALIANA
PROTEIN KINASE 2, ARABIDOPSIS
THALIANA SERINE/THREONINE PROTEIN
KINASE 2, serine/threonine protein
kinase 2		 -0.77 0.31 -0.32
68 AT1G17420 lipoxygenase 3 Arabidopsis thaliana lipoxygenase
3, lipoxygenase 3		 -0.77 0.31 -0.34
69 AT5G47070 Protein kinase superfamily protein -0.77 0.32 -0.3
70 AT2G31945 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G05575.1); Has 61 Blast hits
to 61 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.31 -0.29
71 AT1G20880 RNA-binding (RRM/RBD/RNP motifs) family protein -0.76 0.31 -0.3
72 AT1G59910 Actin-binding FH2 (formin homology 2) family protein -0.76 0.33 -0.31
73 AT2G22300 signal responsive 1 CALMODULIN-BINDING TRANSCRIPTION
ACTIVATOR 3, signal responsive 1		 -0.76 0.31 -0.31
74 AT2G44500 O-fucosyltransferase family protein -0.76 0.31 -0.32
75 AT2G30360 SOS3-interacting protein 4 CBL-INTERACTING PROTEIN KINASE 11,
PROTEIN KINASE SOS2-LIKE 5,
SOS3-interacting protein 4,
SNF1-RELATED PROTEIN KINASE 3.22		 -0.75 0.31 -0.34
76 AT3G52800 A20/AN1-like zinc finger family protein -0.75 0.32 -0.3
77 AT2G27830 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits
to 131 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.75 0.29 -0.33
78 AT1G29400 MEI2-like protein 5 MEI2-like protein 5, MEI2-like
protein 5		 -0.74 0.29 -0.31
79 AT2G25460 CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane
targeting (InterPro:IPR000008); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G04860.1); Has
108 Blast hits to 69 proteins in 11 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.74 0.3 -0.3
80 AT2G28400 Protein of unknown function, DUF584 -0.74 0.33 -0.31
81 AT1G08920 ERD (early response to dehydration) six-like 1 ERD (early response to
dehydration) six-like 1		 -0.74 0.31 -0.32
82 AT4G17230 SCARECROW-like 13 SCARECROW-like 13 -0.74 0.33 -0.32
83 AT2G40270 Protein kinase family protein -0.74 0.3 -0.33
84 AT4G33940 RING/U-box superfamily protein -0.73 0.32 -0.31
85 AT1G19270 DA1 DA1 -0.73 0.3 -0.32
86 AT3G16860 COBRA-like protein 8 precursor COBRA-like protein 8 precursor -0.73 0.31 -0.32
87 AT3G17250 Protein phosphatase 2C family protein -0.73 0.31 -0.32
88 AT3G20660 organic cation/carnitine transporter4 organic cation/carnitine
transporter4, organic
cation/carnitine transporter4		 -0.73 0.31 -0.32
89 AT1G69890 Protein of unknown function (DUF569) -0.73 0.32 -0.31
90 AT4G17500 ethylene responsive element binding factor 1 ethylene responsive element
binding factor 1, ethylene
responsive element binding factor
1		 -0.73 0.31 -0.32
91 AT4G24520 P450 reductase 1 ARABIDOPSIS CYTOCHROME REDUCTASE,
P450 reductase 1		 -0.73 0.33 -0.31
92 AT5G54730 homolog of yeast autophagy 18 (ATG18) F ARABIDOPSIS THALIANA HOMOLOG OF
YEAST AUTOPHAGY 18 (ATG18) F,
homolog of yeast autophagy 18
(ATG18) F, homolog of yeast
autophagy 18 (ATG18) F		 -0.73 0.31 -0.33
93 AT1G19680 RING/U-box superfamily protein -0.73 0.31 -0.31
94 AT1G29760 Putative adipose-regulatory protein (Seipin) -0.72 0.29 -0.31
95 AT2G34600 jasmonate-zim-domain protein 7 jasmonate-zim-domain protein 7,
TIFY5B		 -0.72 0.33 -0.33
96 AT1G63720 BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 490 Blast hits to 394 proteins in
96 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi
- 88; Plants - 175; Viruses - 14; Other Eukaryotes - 79
(source: NCBI BLink).		 -0.72 0.3 -0.3
97 AT3G62010 unknown protein; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; Has 553 Blast hits to 216 proteins in 93
species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi -
58; Plants - 108; Viruses - 0; Other Eukaryotes - 70
(source: NCBI BLink).		 -0.72 0.32 -0.28
98 AT5G66650 Protein of unknown function (DUF607) -0.71 0.33 -0.3
99 AT2G25490 EIN3-binding F box protein 1 EIN3-binding F box protein 1, FBL6 -0.71 0.34 -0.32
100 AT2G03240 EXS (ERD1/XPR1/SYG1) family protein -0.71 0.32 -0.33
101 AT2G27310 F-box family protein -0.71 0.31 -0.31
102 AT2G32830 phosphate transporter 1;5 phosphate transporter 1;5,
PHOSPHATE TRANSPORTER 5		 -0.71 0.3 -0.33
103 AT1G19180 jasmonate-zim-domain protein 1 jasmonate-zim-domain protein 1,
TIFY10A		 -0.71 0.33 -0.32
104 AT1G29340 plant U-box 17 ARABIDOPSIS THALIANA PLANT U-BOX
17, plant U-box 17		 -0.71 0.3 -0.33
105 AT3G12400 Ubiquitin-conjugating enzyme/RWD-like protein ATELC, ELC -0.71 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
106 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.8 0.46 -0.45 C0120
107 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		-0.77 0.45 -0.45 C0220