AT4G26980 : -
Query Information
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AGICode AT4G26980
Description RNI-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G26980 RNI-like superfamily protein 1 0.3 -0.3
2 AT1G53560 Ribosomal protein L18ae family 0.8 0.34 -0.32
3 AT5G62440 Protein of unknown function (DUF3223) -0.8 0.32 -0.32
4 AT5G65760 Serine carboxypeptidase S28 family protein 0.78 0.3 -0.28
5 AT3G54360 zinc ion binding 0.78 0.29 -0.32
6 AT1G12050 fumarylacetoacetase, putative 0.77 0.31 -0.31
7 AT5G08180 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.76 0.31 -0.31
8 AT5G09250 ssDNA-binding transcriptional regulator KIWI -0.76 0.33 -0.32
9 AT3G05060 NOP56-like pre RNA processing ribonucleoprotein -0.76 0.32 -0.32
10 AT3G60340 alpha/beta-Hydrolases superfamily protein 0.76 0.3 -0.31
11 AT1G53280 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog B, DJ-1 homolog B 0.76 0.33 -0.31
12 AT3G58170 BET1P/SFT1P-like protein 14A ATBET11, ARABIDOPSIS THALIANA
BET1P/SFT1P-LIKE PROTEIN 14A,
BET11, BET1P/SFT1P-like protein
14A		 0.76 0.32 -0.32
13 AT5G22650 histone deacetylase 2B ARABIDOPSIS HISTONE DEACETYLASE 2,
ATHD2B, HISTONE DEACETYLASE 2,
histone deacetylase 2B, HDA4,
HDT02, HDT2		 -0.75 0.3 -0.3
14 AT1G03030 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.75 0.33 -0.3
15 AT3G56090 ferritin 3 ferritin 3, ferritin 3 -0.75 0.32 -0.31
16 AT5G60360 aleurain-like protease aleurain-like protease,
aleurain-like protease, SENESCENCE
ASSOCIATED GENE2		 0.74 0.32 -0.31
17 AT5G57815 Cytochrome c oxidase, subunit Vib family protein 0.74 0.31 -0.3
18 AT1G56110 homolog of nucleolar protein NOP56 homolog of nucleolar protein NOP56 -0.73 0.31 -0.32
19 AT5G58420 Ribosomal protein S4 (RPS4A) family protein -0.73 0.32 -0.34
20 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4		 -0.73 0.33 -0.3
21 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10		 -0.73 0.3 -0.28
22 AT2G29590 Thioesterase superfamily protein 0.73 0.31 -0.31
23 AT3G23830 glycine-rich RNA-binding protein 4 AtGRP4, GR-RBP4, glycine-rich
RNA-binding protein 4		 -0.72 0.31 -0.34
24 AT1G63660 GMP synthase (glutamine-hydrolyzing), putative / glutamine
amidotransferase, putative		 -0.72 0.31 -0.32
25 AT2G34310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G29530.1); Has 1236 Blast hits to 680 proteins in
89 species: Archae - 0; Bacteria - 0; Metazoa - 473; Fungi
- 0; Plants - 332; Viruses - 0; Other Eukaryotes - 431
(source: NCBI BLink).		 0.72 0.31 -0.34
26 AT4G29890 choline monooxygenase, putative (CMO-like) 0.72 0.3 -0.31
27 AT5G19920 Transducin/WD40 repeat-like superfamily protein -0.72 0.32 -0.32
28 AT5G16040 Regulator of chromosome condensation (RCC1) family protein -0.71 0.3 -0.34
29 AT3G02300 Regulator of chromosome condensation (RCC1) family protein 0.71 0.3 -0.31
30 AT4G16520 Ubiquitin-like superfamily protein autophagy 8f 0.71 0.32 -0.32
31 AT5G11240 transducin family protein / WD-40 repeat family protein -0.71 0.32 -0.31
32 AT2G21410 vacuolar proton ATPase A2 vacuolar proton ATPase A2 0.71 0.33 -0.31
33 AT5G14520 pescadillo-related -0.71 0.32 -0.32
34 AT4G29220 phosphofructokinase 1 phosphofructokinase 1 0.71 0.31 -0.31
35 AT3G15460 Ribosomal RNA processing Brix domain protein -0.7 0.31 -0.31
36 AT4G35310 calmodulin-domain protein kinase 5 ATCPK5, calmodulin-domain protein
kinase 5		 -0.7 0.32 -0.32
37 AT3G16230 Predicted eukaryotic LigT 0.7 0.33 -0.29
38 AT3G13570 SC35-like splicing factor 30A SC35-like splicing factor 30A,
SC35-like splicing factor 30A		 -0.7 0.33 -0.32
39 AT3G10530 Transducin/WD40 repeat-like superfamily protein -0.7 0.29 -0.32
40 AT1G13030 sphere organelles protein-related -0.7 0.31 -0.34
41 AT3G13150 Tetratricopeptide repeat (TPR)-like superfamily protein -0.7 0.32 -0.31
42 AT1G11240 CONTAINS InterPro DOMAIN/s: Nucleolar protein 12
(InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins
in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921;
Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes -
933 (source: NCBI BLink).		 -0.7 0.33 -0.3
43 AT3G58660 Ribosomal protein L1p/L10e family -0.7 0.3 -0.3
44 AT3G45960 expansin-like A3 expansin-like A3, ATEXPL3, ATHEXP
BETA 2.3, expansin-like A3, EXPL3		 -0.7 0.3 -0.29
45 AT3G51310 VPS35 homolog C VPS35 homolog C 0.7 0.31 -0.32
46 AT5G37930 Protein with RING/U-box and TRAF-like domains 0.7 0.34 -0.31
47 AT5G48810 cytochrome B5 isoform D ATB5-B, ARABIDOPSIS CYTOCHROME B5
ISOFORM D, B5 #3, cytochrome B5
isoform D		 0.69 0.29 -0.3
48 AT5G49650 xylulose kinase-2 xylulose kinase-2, XYLULOSE KINASE
2		 0.69 0.3 -0.31
49 AT5G11350 DNAse I-like superfamily protein 0.69 0.31 -0.31
50 AT5G13760 Plasma-membrane choline transporter family protein 0.69 0.31 -0.31
51 AT1G79150 binding -0.69 0.31 -0.32
52 AT4G27380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.69 0.31 -0.31
53 AT2G43400 electron-transfer flavoprotein:ubiquinone oxidoreductase electron-transfer
flavoprotein:ubiquinone
oxidoreductase		 0.69 0.33 -0.32
54 AT5G57120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleolus;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: LisH
dimerisation motif (InterPro:IPR006594), SRP40, C-terminal
(InterPro:IPR007718); Has 101969 Blast hits to 55488
proteins in 2506 species: Archae - 424; Bacteria - 13843;
Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses -
569; Other Eukaryotes - 34792 (source: NCBI BLink).		 -0.69 0.32 -0.32
55 AT3G60810 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1499 (InterPro:IPR010865); Has 444
Blast hits to 444 proteins in 143 species: Archae - 0;
Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51;
Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).		 0.68 0.3 -0.32
56 AT5G43850 RmlC-like cupins superfamily protein ARD4, ATARD4 0.68 0.33 -0.3
57 AT2G06005 FRIGIDA interacting protein 1 FRIGIDA interacting protein 1 0.68 0.3 -0.31
58 AT3G25740 methionine aminopeptidase 1C methionine aminopeptidase 1C,
METHIONINE AMINOPEPTIDASE 1C		 0.68 0.28 -0.32
59 AT3G53950 glyoxal oxidase-related protein 0.68 0.31 -0.31
60 AT1G15480 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.3 -0.29
61 AT1G79490 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 2217 -0.68 0.3 -0.3
62 AT2G47310 flowering time control protein-related / FCA gamma-related 0.68 0.31 -0.32
63 AT5G14050 Transducin/WD40 repeat-like superfamily protein -0.68 0.34 -0.31
64 AT5G62440 Protein of unknown function (DUF3223) -0.68 0.31 -0.3
65 AT2G39000 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.68 0.33 -0.33
66 AT4G31790 Tetrapyrrole (Corrin/Porphyrin) Methylases -0.67 0.32 -0.33
67 AT2G34840 Coatomer epsilon subunit 0.67 0.31 -0.32
68 AT1G01050 pyrophosphorylase 1 pyrophosphorylase 1,
pyrophosphorylase 1		 -0.67 0.32 -0.29
69 AT5G15550 Transducin/WD40 repeat-like superfamily protein -0.67 0.31 -0.3
70 AT1G28320 protease-related DEG15 0.67 0.33 -0.31
71 AT1G13160 ARM repeat superfamily protein -0.67 0.33 -0.32
72 AT4G25730 FtsJ-like methyltransferase family protein -0.67 0.32 -0.33
73 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein -0.67 0.3 -0.29
74 AT4G18975 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.3 -0.31
75 AT3G27280 prohibitin 4 prohibitin 4, prohibitin 4 -0.66 0.3 -0.31
76 AT1G73750 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 0.66 0.32 -0.31
77 AT3G54480 SKP1/ASK-interacting protein 5 SKP1/ASK-interacting protein 5,
SKP5		 0.66 0.3 -0.3
78 AT3G04470 Ankyrin repeat family protein -0.66 0.32 -0.33
79 AT3G27420 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G40600.1); Has 43 Blast hits
to 43 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.66 0.32 -0.3
80 AT1G66350 RGA-like 1 RGL, RGA-like 1 0.66 0.32 -0.31
81 AT5G48870 Small nuclear ribonucleoprotein family protein SUPERSENSITIVE TO ABA AND DROUGHT
1		 -0.66 0.29 -0.31
82 AT3G55510 Noc2p family REBELOTE -0.66 0.33 -0.33
83 AT5G41190 CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1)
Zn-ribbon like (InterPro:IPR014881), D-site 20S pre-rRNA
nuclease (InterPro:IPR017117); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.65 0.31 -0.3
84 AT4G10760 mRNAadenosine methylase EMBRYO DEFECTIVE 1706,
mRNAadenosine methylase		 -0.65 0.32 -0.31
85 AT2G18520 Tetratricopeptide repeat (TPR)-like superfamily protein -0.65 0.32 -0.31
86 AT1G32440 plastidial pyruvate kinase 3 plastidial pyruvate kinase 3 -0.65 0.32 -0.33
87 AT5G18440 CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental
retardation-interacting protein 1, conserved region
(InterPro:IPR019496); Has 1333 Blast hits to 1211 proteins
in 205 species: Archae - 0; Bacteria - 137; Metazoa - 339;
Fungi - 162; Plants - 70; Viruses - 6; Other Eukaryotes -
619 (source: NCBI BLink).		 AtNUFIP, nuclear FMRP-interacting
protein		 -0.65 0.32 -0.3
88 AT1G03360 ribosomal RNA processing 4 ribosomal RNA processing 4,
ribosomal RNA processing 4		 -0.65 0.32 -0.31
89 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.65 0.31 -0.34
90 AT1G47330 CBS domain-containing protein with a domain of unknown
function (DUF21)		 0.65 0.31 -0.34
91 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1		 -0.65 0.32 -0.33
92 AT3G51670 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 0.65 0.34 -0.28
93 AT4G09340 SPla/RYanodine receptor (SPRY) domain-containing protein 0.65 0.33 -0.27
94 AT3G07590 Small nuclear ribonucleoprotein family protein -0.65 0.32 -0.28
95 AT5G06110 DnaJ domain ;Myb-like DNA-binding domain -0.65 0.3 -0.31
96 AT3G23690 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.65 0.35 -0.32
97 AT3G04620 Alba DNA/RNA-binding protein D NUCLDUO1-ACTIVATEEIC ACID
BINDING PROTEIN 1		 -0.64 0.31 -0.33
98 AT3G02490 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.32 -0.33
99 AT3G13160 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.33 -0.33
100 AT1G36310 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.63 0.31 -0.32
101 AT3G26410 methyltransferases;nucleic acid binding AtTRM11, tRNA modification 11 -0.63 0.32 -0.3
102 AT3G49240 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1796 -0.63 0.31 -0.32
103 AT5G58370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.63 0.3 -0.29
104 AT2G44820 unknown protein; Has 70 Blast hits to 70 proteins in 25
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4;
Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 -0.63 0.29 -0.32
105 AT3G11964 RNA binding;RNA binding -0.63 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
106 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		0.7 0.46 -0.46 C0053