AGICode | AT4G23200 |
Description | cysteine-rich RLK (RECEPTOR-like protein kinase) 12 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G23200 | cysteine-rich RLK (RECEPTOR-like protein kinase) 12 | cysteine-rich RLK (RECEPTOR-like protein kinase) 12 |
1 | 0.32 | -0.31 | ||
2 | AT4G23570 | phosphatase-related | SGT1A | 0.81 | 0.32 | -0.32 | ||
3 | AT3G23640 | heteroglycan glucosidase 1 | heteroglycan glucosidase 1 | -0.8 | 0.32 | -0.31 | ||
4 | AT3G44450 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52740.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.74 | 0.31 | -0.33 | |||
5 | AT3G19100 | Protein kinase superfamily protein | -0.72 | 0.33 | -0.31 | |||
6 | AT1G65060 | 4-coumarate:CoA ligase 3 | 4-coumarate:CoA ligase 3 | 0.71 | 0.29 | -0.33 | ||
7 | AT3G53260 | phenylalanine ammonia-lyase 2 | ATPAL2, phenylalanine ammonia-lyase 2 |
0.7 | 0.32 | -0.32 | ||
8 | AT2G26440 | Plant invertase/pectin methylesterase inhibitor superfamily | 0.7 | 0.32 | -0.32 | |||
9 | AT1G04430 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.69 | 0.32 | -0.3 | |||
10 | AT1G26665 | Mediator complex, subunit Med10 | -0.69 | 0.31 | -0.3 | |||
11 | AT4G12500 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.68 | 0.31 | -0.33 | |||
12 | AT1G65390 | phloem protein 2 A5 | phloem protein 2 A5, phloem protein 2 A5 |
0.68 | 0.3 | -0.3 | ||
13 | AT2G16430 | purple acid phosphatase 10 | ATPAP10, purple acid phosphatase 10 |
0.68 | 0.3 | -0.31 | ||
14 | AT1G19940 | glycosyl hydrolase 9B5 | glycosyl hydrolase 9B5, glycosyl hydrolase 9B5 |
0.68 | 0.29 | -0.31 | ||
15 | AT5G63190 | MA3 domain-containing protein | -0.68 | 0.31 | -0.31 | |||
16 | AT3G27230 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.68 | 0.31 | -0.3 | |||
17 | AT3G16530 | Legume lectin family protein | 0.67 | 0.31 | -0.3 | |||
18 | AT4G14340 | casein kinase I | casein kinase I, CASEIN KINASE I-LIKE 11 |
-0.67 | 0.29 | -0.33 | ||
19 | AT3G05660 | receptor like protein 33 | receptor like protein 33, receptor like protein 33 |
0.66 | 0.34 | -0.31 | ||
20 | AT1G55910 | zinc transporter 11 precursor | zinc transporter 11 precursor | 0.66 | 0.32 | -0.31 | ||
21 | AT2G29120 | glutamate receptor 2.7 | glutamate receptor 2.7, GLUTAMATE RECEPTOR 2.7, glutamate receptor 2.7 |
0.66 | 0.32 | -0.31 | ||
22 | AT5G54720 | Ankyrin repeat family protein | 0.66 | 0.32 | -0.28 | |||
23 | AT4G12490 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.66 | 0.32 | -0.32 | |||
24 | AT1G03090 | methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) |
MCCA | -0.66 | 0.31 | -0.3 | ||
25 | AT5G66180 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.65 | 0.33 | -0.32 | |||
26 | AT5G60210 | ROP interactive partner 5 | ROP interactive partner 5 | -0.65 | 0.32 | -0.3 | ||
27 | AT3G62980 | F-box/RNI-like superfamily protein | AtTIR1, TRANSPORT INHIBITOR RESPONSE 1 |
-0.65 | 0.32 | -0.32 | ||
28 | AT1G53920 | GDSL-motif lipase 5 | GDSL-motif lipase 5 | 0.65 | 0.3 | -0.3 | ||
29 | AT5G01410 | Aldolase-type TIM barrel family protein | ATPDX1, ARABIDOPSIS THALIANA PYRIDOXINE BIOSYNTHESIS 1.3, PDX1, PYRIDOXINE BIOSYNTHESIS 1.3, REDUCED SUGAR RESPONSE 4 |
0.65 | 0.3 | -0.28 | ||
30 | AT1G73805 | Calmodulin binding protein-like | SAR Deficient 1 | 0.64 | 0.31 | -0.32 | ||
31 | AT5G19860 | Protein of unknown function, DUF538 | -0.64 | 0.33 | -0.32 | |||
32 | AT1G78460 | SOUL heme-binding family protein | 0.63 | 0.31 | -0.32 | |||
33 | AT4G14365 | XB3 ortholog 4 in Arabidopsis thaliana | XB3 ortholog 4 in Arabidopsis thaliana |
0.63 | 0.32 | -0.3 | ||
34 | AT2G27660 | Cysteine/Histidine-rich C1 domain family protein | 0.63 | 0.29 | -0.3 | |||
35 | AT2G29390 | sterol 4-alpha-methyl-oxidase 2-2 | STEROL 4-ALPHA-METHYL-OXIDASE 2, Arabidopsis thaliana sterol 4-alpha-methyl-oxidase 2-2, sterol 4-alpha-methyl-oxidase 2-2 |
-0.62 | 0.32 | -0.32 | ||
36 | AT4G03450 | Ankyrin repeat family protein | 0.62 | 0.35 | -0.31 | |||
37 | AT5G23760 | Copper transport protein family | 0.62 | 0.3 | -0.34 | |||
38 | AT3G52190 | phosphate transporter traffic facilitator1 | AtPHF1, phosphate transporter traffic facilitator1 |
0.62 | 0.29 | -0.33 | ||
39 | AT3G47480 | Calcium-binding EF-hand family protein | 0.62 | 0.32 | -0.32 | |||
40 | AT1G33960 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
AVRRPT2-INDUCED GENE 1 | 0.61 | 0.31 | -0.31 | ||
41 | AT1G65390 | phloem protein 2 A5 | phloem protein 2 A5, phloem protein 2 A5 |
0.61 | 0.31 | -0.33 | ||
42 | AT1G64170 | cation/H+ exchanger 16 | cation/H+ exchanger 16, cation/H+ exchanger 16 |
0.61 | 0.32 | -0.32 | ||
43 | AT5G39710 | Tetratricopeptide repeat (TPR)-like superfamily protein | EMBRYO DEFECTIVE 2745 | 0.61 | 0.31 | -0.33 | ||
44 | AT5G10710 | INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.6 | 0.31 | -0.29 | |||
45 | AT5G57790 | unknown protein; Has 13 Blast hits to 11 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.3 | -0.31 | |||
46 | AT5G62070 | IQ-domain 23 | IQ-domain 23 | 0.6 | 0.32 | -0.31 | ||
47 | AT5G61160 | anthocyanin 5-aromatic acyltransferase 1 | anthocyanin 5-aromatic acyltransferase 1 |
0.6 | 0.32 | -0.32 | ||
48 | AT5G40780 | lysine histidine transporter 1 | lysine histidine transporter 1 | 0.6 | 0.33 | -0.34 | ||
49 | AT4G15780 | vesicle-associated membrane protein 724 | vesicle-associated membrane protein 724, vesicle-associated membrane protein 724 |
-0.6 | 0.32 | -0.33 | ||
50 | AT4G18250 | receptor serine/threonine kinase, putative | 0.59 | 0.3 | -0.34 | |||
51 | AT5G14620 | domains rearranged methyltransferase 2 | DMT7, domains rearranged methyltransferase 2 |
-0.59 | 0.35 | -0.31 | ||
52 | AT3G06380 | tubby-like protein 9 | tubby-like protein 9, tubby-like protein 9 |
-0.59 | 0.3 | -0.31 | ||
53 | AT1G10370 | Glutathione S-transferase family protein | GLUTATHIONE S-TRANSFERASE TAU 17, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE 30, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE U17 |
0.59 | 0.31 | -0.3 | ||
54 | AT5G43810 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase |
ARGONAUTE 10, PINHEAD, ZWILLE | -0.59 | 0.33 | -0.32 | ||
55 | AT4G35770 | Rhodanese/Cell cycle control phosphatase superfamily protein |
ARABIDOPSIS THALIANA SENESCENCE 1, DARK INDUCIBLE 1, SENESCENCE 1, SENESCENCE ASSOCIATED GENE 1 |
-0.58 | 0.31 | -0.32 | ||
56 | AT4G08850 | Leucine-rich repeat receptor-like protein kinase family protein |
0.58 | 0.33 | -0.28 | |||
57 | AT5G05550 | sequence-specific DNA binding transcription factors | -0.58 | 0.32 | -0.31 | |||
58 | AT1G13000 | Protein of unknown function (DUF707) | 0.58 | 0.29 | -0.31 | |||
59 | AT3G12120 | fatty acid desaturase 2 | fatty acid desaturase 2 | -0.58 | 0.32 | -0.31 | ||
60 | AT2G22420 | Peroxidase superfamily protein | -0.57 | 0.31 | -0.32 | |||
61 | AT3G53880 | NAD(P)-linked oxidoreductase superfamily protein | Aldo-keto reductase family 4 member C11 |
0.57 | 0.32 | -0.33 | ||
62 | AT2G25470 | receptor like protein 21 | receptor like protein 21, receptor like protein 21 |
0.57 | 0.31 | -0.3 | ||
63 | AT2G35720 | DNAJ heat shock N-terminal domain-containing protein | ORIENTATION UNDER VERY LOW FLUENCES OF LIGHT 1 |
0.57 | 0.3 | -0.31 | ||
64 | AT2G25080 | glutathione peroxidase 1 | GLUTATHIONE PEROXIDASE 1, glutathione peroxidase 1 |
-0.57 | 0.31 | -0.31 | ||
65 | AT4G26200 | 1-amino-cyclopropane-1-carboxylate synthase 7 | 1-amino-cyclopropane-1-carboxylate synthase 7, ATACS7 |
0.57 | 0.32 | -0.32 | ||
66 | AT4G32910 | CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.57 | 0.33 | -0.3 | |||
67 | AT3G51110 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.57 | 0.31 | -0.3 | |||
68 | AT5G55090 | mitogen-activated protein kinase kinase kinase 15 | mitogen-activated protein kinase kinase kinase 15 |
0.57 | 0.3 | -0.33 | ||
69 | AT1G66720 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.57 | 0.29 | -0.32 | |||
70 | AT3G17510 | CBL-interacting protein kinase 1 | CBL-interacting protein kinase 1, SNF1-RELATED PROTEIN KINASE 3.16 |
-0.56 | 0.31 | -0.32 | ||
71 | AT5G10860 | Cystathionine beta-synthase (CBS) family protein | CBS domain containing protein 3 | -0.56 | 0.32 | -0.3 | ||
72 | AT3G22220 | hAT transposon superfamily | -0.55 | 0.34 | -0.3 | |||
73 | AT2G29400 | type one protein phosphatase 1 | PROTEIN PHOSPHATASE 1, type one protein phosphatase 1 |
-0.55 | 0.31 | -0.3 | ||
74 | AT3G04730 | indoleacetic acid-induced protein 16 | indoleacetic acid-induced protein 16 |
-0.55 | 0.3 | -0.34 | ||
75 | AT2G46760 | D-arabinono-1,4-lactone oxidase family protein | -0.54 | 0.34 | -0.32 | |||
76 | AT3G20310 | ethylene response factor 7 | ATERF-7, ATERF7, ethylene response factor 7 |
-0.54 | 0.32 | -0.28 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
77 | C0053 | ADP | - | ADP | phosphatidylcholine biosynthesis I, mannitol degradation II, lipid IVA biosynthesis, stachyose degradation, Rubisco shunt, copper transport II, glycerol degradation IV, chorismate biosynthesis, folate polyglutamylation II, galactose degradation III, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, UDP-L-arabinose biosynthesis II (from L-arabinose), cadmium transport I, folate polyglutamylation, coenzyme A biosynthesis, sulfate activation for sulfonation, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), pyrimidine deoxyribonucleotides de novo biosynthesis I, galactose degradation II, inosine-5'-phosphate biosynthesis II, ribose degradation, acetyl-CoA biosynthesis (from citrate), inositol pyrophosphates biosynthesis, fatty acid biosynthesis initiation I, xylose degradation I, adenine and adenosine salvage VI, TCA cycle variation III (eukaryotic), tetrahydrofolate biosynthesis II, phosphatidylethanolamine biosynthesis II, pyridoxal 5'-phosphate salvage pathway, citrulline biosynthesis, trans-zeatin biosynthesis, glutamine biosynthesis I, arginine biosynthesis II (acetyl cycle), L-Ndelta-acetylornithine biosynthesis, mevalonate pathway I, methionine biosynthesis II, trehalose degradation II (trehalase), citrulline degradation, methionine salvage pathway, TCA cycle variation V (plant), chlorophyllide a biosynthesis I, starch degradation I, methylerythritol phosphate pathway, pyridine nucleotide cycling (plants), ceramide degradation, biotin-carboxyl carrier protein assembly, purine nucleotide metabolism (phosphotransfer and nucleotide modification), UDP-D-galacturonate biosynthesis II (from D-galacturonate), asparagine biosynthesis III (tRNA-dependent), superpathway of glyoxylate cycle and fatty acid degradation, NAD/NADH phosphorylation and dephosphorylation, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3), galactose degradation I (Leloir pathway), uridine-5'-phosphate biosynthesis, lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3), sucrose degradation III, lysine biosynthesis VI, sphingolipid biosynthesis (plants), choline biosynthesis I, GDP-glucose biosynthesis, photorespiration, gamma-glutamyl cycle (plant pathway), 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, thiamine biosynthesis II, proline biosynthesis III, glutathione biosynthesis, folate transformations II, ornithine biosynthesis, diphthamide biosynthesis, S-methyl-5'-thioadenosine degradation I, starch biosynthesis, arginine biosynthesis I, homoserine biosynthesis, flavin biosynthesis I (bacteria and plants), sucrose biosynthesis I, leucine degradation I, glycolysis I, pyrimidine ribonucleotides interconversion, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza), glycolysis IV (plant cytosol), Calvin-Benson-Bassham cycle, UDP-D-glucuronate biosynthesis (from myo-inositol), guanine and guanosine salvage III, glutamine biosynthesis III, L-glutamine biosynthesis II (tRNA-dependent), GDP-L-fucose biosynthesis II (from L-fucose), nitrate reduction II (assimilatory), ammonia assimilation cycle II, gluconeogenesis I, threonine biosynthesis from homoserine, mannose degradation, urea cycle, lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3), biotin biosynthesis II |
-0.65 | 0.42 | -0.44 | ||
78 | C0073 | Cysteine | L-Cysteine | L-Cysteine | alanine biosynthesis III, cysteine biosynthesis I, gamma-glutamyl cycle (plant pathway), farnesylcysteine salvage pathway, molybdenum cofactor biosynthesis, thiamine biosynthesis II, cyanide detoxification II, indole glucosinolate breakdown (insect chewing induced), glutathione degradation, glutathione biosynthesis, molybdenum cofactor biosynthesis II (eukaryotes), cyanide degradation, homocysteine and cysteine interconversion, methionine biosynthesis II, tRNA charging, gamma-glutamyl cycle, coenzyme A biosynthesis |
-0.6 | 0.44 | -0.45 |