AGICode | AT4G19430 |
Description | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G19430 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
1 | 0.33 | -0.3 | |||
2 | AT2G26710 | Cytochrome P450 superfamily protein | PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 |
-0.73 | 0.31 | -0.33 | ||
3 | AT5G64900 | precursor of peptide 1 | ARABIDOPSIS THALIANA PEPTIDE 1, PEPTIDE 1, precursor of peptide 1 |
0.71 | 0.33 | -0.3 | ||
4 | AT4G14560 | indole-3-acetic acid inducible | AUXIN RESISTANT 5, indole-3-acetic acid inducible |
-0.7 | 0.3 | -0.32 | ||
5 | AT1G04240 | AUX/IAA transcriptional regulator family protein | indole-3-acetic acid inducible 3, SHORT HYPOCOTYL 2 |
-0.69 | 0.31 | -0.29 | ||
6 | AT3G08030 | Protein of unknown function, DUF642 | -0.69 | 0.32 | -0.33 | |||
7 | AT4G02820 | Pentatricopeptide repeat (PPR) superfamily protein | -0.67 | 0.3 | -0.33 | |||
8 | AT1G49470 | Family of unknown function (DUF716) | 0.67 | 0.34 | -0.32 | |||
9 | AT3G09730 | unknown protein; Has 1171 Blast hits to 1097 proteins in 212 species: Archae - 14; Bacteria - 83; Metazoa - 583; Fungi - 105; Plants - 149; Viruses - 14; Other Eukaryotes - 223 (source: NCBI BLink). |
-0.67 | 0.28 | -0.32 | |||
10 | AT5G64200 | ortholog of human splicing factor SC35 | ortholog of human splicing factor SC35, ARABIDOPSIS THALIANA ORTHOLOG OF HUMAN SPLICING FACTOR SC35, ortholog of human splicing factor SC35 |
-0.66 | 0.3 | -0.31 | ||
11 | AT5G01620 | TRICHOME BIREFRINGENCE-LIKE 35 | TRICHOME BIREFRINGENCE-LIKE 35 | -0.66 | 0.31 | -0.31 | ||
12 | AT3G11500 | Small nuclear ribonucleoprotein family protein | -0.65 | 0.33 | -0.3 | |||
13 | AT3G50340 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G67020.1); Has 128 Blast hits to 128 proteins in 39 species: Archae - 0; Bacteria - 46; Metazoa - 0; Fungi - 3; Plants - 76; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
-0.65 | 0.31 | -0.3 | |||
14 | AT2G02970 | GDA1/CD39 nucleoside phosphatase family protein | 0.65 | 0.32 | -0.33 | |||
15 | AT1G66350 | RGA-like 1 | RGL, RGA-like 1 | 0.65 | 0.3 | -0.31 | ||
16 | AT4G32850 | nuclear poly(a) polymerase | nuclear poly(a) polymerase, poly(A) polymerase IV |
0.65 | 0.31 | -0.31 | ||
17 | AT2G35050 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
0.65 | 0.35 | -0.32 | |||
18 | AT5G15160 | BANQUO 2 | BASIC HELIX-LOOP-HELIX PROTEIN 134, BANQUO 2 |
-0.64 | 0.31 | -0.31 | ||
19 | AT5G26240 | chloride channel D | ATCLC-D, chloride channel D | 0.63 | 0.31 | -0.31 | ||
20 | AT5G04920 | EAP30/Vps36 family protein | 0.63 | 0.31 | -0.32 | |||
21 | AT5G16210 | HEAT repeat-containing protein | 0.63 | 0.34 | -0.3 | |||
22 | AT2G33020 | receptor like protein 24 | receptor like protein 24, receptor like protein 24 |
0.63 | 0.31 | -0.31 | ||
23 | AT4G26850 | mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase |
vitamin c defective 2 | 0.63 | 0.3 | -0.31 | ||
24 | AT4G39070 | B-box zinc finger family protein | -0.62 | 0.33 | -0.32 | |||
25 | AT4G01990 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.62 | 0.32 | -0.33 | |||
26 | AT4G01210 | glycosyl transferase family 1 protein | 0.62 | 0.3 | -0.32 | |||
27 | AT2G23260 | UDP-glucosyl transferase 84B1 | UDP-glucosyl transferase 84B1 | 0.62 | 0.35 | -0.3 | ||
28 | AT5G42580 | cytochrome P450, family 705, subfamily A, polypeptide 12 | cytochrome P450, family 705, subfamily A, polypeptide 12 |
0.62 | 0.32 | -0.28 | ||
29 | AT5G50915 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.62 | 0.3 | -0.31 | |||
30 | AT3G14570 | glucan synthase-like 4 | glucan synthase-like 4, atgsl4, gsl04, glucan synthase-like 4 |
0.62 | 0.31 | -0.32 | ||
31 | AT5G30450 | transposable element gene | 0.61 | 0.31 | -0.33 | |||
32 | AT4G28180 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; Has 1508 Blast hits to 1315 proteins in 223 species: Archae - 4; Bacteria - 127; Metazoa - 687; Fungi - 310; Plants - 142; Viruses - 28; Other Eukaryotes - 210 (source: NCBI BLink). |
-0.61 | 0.31 | -0.3 | |||
33 | AT1G48260 | CBL-interacting protein kinase 17 | CBL-interacting protein kinase 17, SNF1-RELATED PROTEIN KINASE 3.21 |
0.6 | 0.3 | -0.29 | ||
34 | AT5G02140 | Pathogenesis-related thaumatin superfamily protein | -0.6 | 0.31 | -0.33 | |||
35 | AT3G45810 | ferric reductase-like transmembrane component family protein |
0.6 | 0.3 | -0.33 | |||
36 | AT2G18010 | SAUR-like auxin-responsive protein family | -0.6 | 0.3 | -0.32 | |||
37 | AT5G25210 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.6 | 0.3 | -0.32 | |||
38 | AT5G56220 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.59 | 0.34 | -0.31 | |||
39 | AT3G58000 | VQ motif-containing protein | 0.59 | 0.35 | -0.33 | |||
40 | AT5G22910 | cation/H+ exchanger 9 | ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 9, cation/H+ exchanger 9 |
0.58 | 0.31 | -0.3 | ||
41 | AT2G46340 | SPA (suppressor of phyA-105) protein family | SUPPRESSOR OF PHYA-105 1 | 0.58 | 0.3 | -0.32 | ||
42 | AT5G47370 | Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein | HAT2 | -0.58 | 0.32 | -0.28 | ||
43 | AT2G43160 | ENTH/VHS family protein | 0.58 | 0.33 | -0.31 | |||
44 | AT1G51340 | MATE efflux family protein | 0.58 | 0.29 | -0.32 | |||
45 | AT1G09290 | unknown protein; Has 73 Blast hits to 71 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 11; Plants - 54; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
-0.58 | 0.32 | -0.3 | |||
46 | AT3G24520 | heat shock transcription factor C1 | AT-HSFC1, heat shock transcription factor C1 |
-0.58 | 0.3 | -0.31 | ||
47 | AT3G54250 | GHMP kinase family protein | -0.57 | 0.29 | -0.32 | |||
48 | AT5G40540 | Protein kinase superfamily protein | -0.57 | 0.32 | -0.32 | |||
49 | AT1G78150 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1); Has 152 Blast hits to 146 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.32 | -0.31 | |||
50 | AT5G11070 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.57 | 0.31 | -0.32 | |||
51 | AT3G16050 | pyridoxine biosynthesis 1.2 | A37, ARABIDOPSIS THALIANA PYRIDOXINE BIOSYNTHESIS 1.2, pyridoxine biosynthesis 1.2 |
-0.57 | 0.31 | -0.32 | ||
52 | AT1G78100 | F-box family protein | auxin up-regulated f-box protein 1 | -0.57 | 0.3 | -0.3 | ||
53 | AT5G13460 | IQ-domain 11 | IQ-domain 11 | -0.56 | 0.28 | -0.33 | ||
54 | AT1G04250 | AUX/IAA transcriptional regulator family protein | AUXIN RESISTANT 3, indole-3-acetic acid inducible 17 |
-0.56 | 0.32 | -0.34 | ||
55 | AT1G15550 | gibberellin 3-oxidase 1 | ARABIDOPSIS THALIANA GIBBERELLIN 3 BETA-HYDROXYLASE 1, gibberellin 3-oxidase 1, GA REQUIRING 4 |
-0.55 | 0.31 | -0.32 | ||
56 | AT5G25830 | GATA transcription factor 12 | GATA transcription factor 12 | -0.55 | 0.32 | -0.31 | ||
57 | AT2G33680 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.55 | 0.3 | -0.36 | |||
58 | AT2G37070 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53320.1); Has 1323 Blast hits to 775 proteins in 176 species: Archae - 0; Bacteria - 113; Metazoa - 351; Fungi - 175; Plants - 115; Viruses - 13; Other Eukaryotes - 556 (source: NCBI BLink). |
-0.55 | 0.32 | -0.3 | |||
59 | AT5G59380 | methyl-CPG-binding domain 6 | ATMBD6, methyl-CPG-binding domain 6 |
-0.54 | 0.31 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
60 | C0220 | Pyruvic acid | - | Pyruvate | sucrose degradation to ethanol and lactate (anaerobic), alanine degradation II (to D-lactate), alanine degradation III, glutamine biosynthesis III, pyruvate fermentation to ethanol II, serine racemization, methylerythritol phosphate pathway, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), valine biosynthesis, seleno-amino acid biosynthesis, phenylalanine degradation III, an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate, tetrahydrofolate biosynthesis II, methylglyoxal degradation I, glycolysis I, tryptophan biosynthesis, salicylate biosynthesis I, pyruvate fermentation to lactate, methionine biosynthesis II, glutathione-mediated detoxification II, IAA biosynthesis I, TCA cycle variation V (plant), Rubisco shunt, gluconeogenesis I, acetaldehyde biosynthesis I, homocysteine and cysteine interconversion, glycolysis IV (plant cytosol), 4-aminobutyrate degradation IV, beta-alanine biosynthesis II, isoleucine biosynthesis I (from threonine), glutamate degradation IV, lysine biosynthesis VI, acetyl-CoA biosynthesis (from pyruvate), alanine biosynthesis II |
0.83 | 0.41 | -0.45 |