AT4G13270 : -
Query Information
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AGICode AT4G13270
Description Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G13270 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 1 0.31 -0.32
2 AT1G79210 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 0.87 0.31 -0.3
3 AT5G41560 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin
ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.87 0.33 -0.3
4 AT1G33490 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2062 (InterPro:IPR018639); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29
species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0;
Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.87 0.31 -0.34
5 AT5G41350 RING/U-box superfamily protein 0.85 0.31 -0.31
6 AT1G48440 B-cell receptor-associated 31-like 0.85 0.32 -0.32
7 AT1G50940 electron transfer flavoprotein alpha electron transfer flavoprotein
alpha		 0.85 0.3 -0.33
8 AT5G43430 electron transfer flavoprotein beta electron transfer flavoprotein
beta		 0.85 0.32 -0.33
9 AT3G15580 Ubiquitin-like superfamily protein AUTOPHAGY 8H, AUTOPHAGY 8I 0.85 0.32 -0.32
10 AT3G03890 FMN binding 0.84 0.29 -0.31
11 AT3G48760 DHHC-type zinc finger family protein 0.84 0.29 -0.31
12 AT1G68820 Transmembrane Fragile-X-F-associated protein 0.84 0.31 -0.32
13 AT2G17700 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase 8 0.84 0.31 -0.34
14 AT2G26230 uricase / urate oxidase / nodulin 35, putative 0.83 0.31 -0.32
15 AT1G01710 Acyl-CoA thioesterase family protein 0.83 0.31 -0.31
16 AT1G49300 RAB GTPase homolog G3E ARABIDOPSIS RAB GTPASE HOMOLOG 7,
ARABIDOPSIS RAB GTPASE HOMOLOG
G3E, RAB GTPase homolog G3E		 0.83 0.32 -0.31
17 AT2G01490 phytanoyl-CoA dioxygenase (PhyH) family protein 0.83 0.32 -0.34
18 AT4G20330 Transcription initiation factor TFIIE, beta subunit 0.83 0.31 -0.33
19 AT5G59890 actin depolymerizing factor 4 actin depolymerizing factor 4,
ATADF4		 0.83 0.3 -0.31
20 AT2G47710 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.82 0.29 -0.32
21 AT4G02860 Phenazine biosynthesis PhzC/PhzF protein 0.82 0.33 -0.32
22 AT1G10500 chloroplast-localized ISCA-like protein chloroplast-localized ISCA-like
protein, chloroplast-localized
ISCA-like protein		 0.82 0.31 -0.34
23 AT4G30490 AFG1-like ATPase family protein 0.82 0.32 -0.29
24 AT3G45160 Putative membrane lipoprotein -0.82 0.31 -0.31
25 AT1G23440 Peptidase C15, pyroglutamyl peptidase I-like 0.82 0.31 -0.31
26 AT1G76490 hydroxy methylglutaryl CoA reductase 1 AtHMGR1, hydroxy methylglutaryl
CoA reductase 1,
3-HYDROXY-3-METHYLGLUTARYL COA
REDUCTASE 1		 0.82 0.33 -0.32
27 AT3G22260 Cysteine proteinases superfamily protein 0.82 0.3 -0.31
28 AT3G55070 LisH/CRA/RING-U-box domains-containing protein 0.81 0.31 -0.32
29 AT4G15100 serine carboxypeptidase-like 30 serine carboxypeptidase-like 30 0.81 0.31 -0.32
30 AT1G49670 ARP protein (REF) NQR 0.81 0.33 -0.31
31 AT5G03660 Family of unknown function (DUF662) 0.81 0.29 -0.31
32 AT3G29350 histidine-containing phosphotransmitter 2 histidine-containing
phosphotransmitter 2		 0.81 0.3 -0.31
33 AT5G16830 syntaxin of plants 21 ATPEP12, ATSYP21, PEP12, PEP12P,
syntaxin of plants 21		 0.81 0.33 -0.34
34 AT5G48800 Phototropic-responsive NPH3 family protein -0.81 0.3 -0.33
35 AT2G31350 glyoxalase 2-5 glyoxalase 2-5 0.81 0.33 -0.29
36 AT3G12400 Ubiquitin-conjugating enzyme/RWD-like protein ATELC, ELC 0.81 0.33 -0.29
37 AT3G43230 RING/FYVE/PHD-type zinc finger family protein 0.81 0.32 -0.32
38 AT4G36040 Chaperone DnaJ-domain superfamily protein DnaJ11 0.81 0.29 -0.34
39 AT1G54130 RELA/SPOT homolog 3 AT-RSH3, RELA/SPOT HOMOLOG 3,
RELA/SPOT homolog 3		 0.81 0.31 -0.34
40 AT5G05180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G10880.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.81 0.3 -0.31
41 AT5G06370 NC domain-containing protein-related 0.81 0.3 -0.32
42 AT4G35360 Uncharacterised conserved protein (UCP030210) 0.8 0.33 -0.33
43 AT4G29160 SNF7 family protein SNF7.1 0.8 0.31 -0.32
44 AT1G22650 Plant neutral invertase family protein alkaline/neutral invertase D -0.8 0.31 -0.33
45 AT1G61580 R-protein L3 B ARABIDOPSIS RIBOSOMAL PROTEIN 2,
R-protein L3 B		 -0.8 0.32 -0.3
46 AT1G06430 FTSH protease 8 FTSH protease 8 0.8 0.3 -0.33
47 AT4G29490 Metallopeptidase M24 family protein 0.8 0.3 -0.31
48 AT4G27990 YGGT family protein ATYLMG1-2, YLMG1-2 0.8 0.31 -0.32
49 AT5G65860 ankyrin repeat family protein -0.8 0.32 -0.31
50 AT5G04830 Nuclear transport factor 2 (NTF2) family protein 0.8 0.31 -0.32
51 AT2G26670 Plant haem oxygenase (decyclizing) family protein ARABIDOPSIS THALIANA HEME
OXYGENASE 1, GENOMES UNCOUPLED 2,
HEME OXYGENASE 1, HEME OXYGENASE
1, HEME OXYGENASE 6, REVERSAL OF
THE DET PHENOTYPE 4		 0.79 0.31 -0.34
52 AT1G29850 double-stranded DNA-binding family protein 0.79 0.31 -0.32
53 AT3G44620 protein tyrosine phosphatases;protein tyrosine phosphatases 0.79 0.31 -0.34
54 AT5G60160 Zn-dependent exopeptidases superfamily protein 0.79 0.3 -0.31
55 AT3G03740 BTB-POZ and MATH domain 4 BTB-POZ AND MATH DOMAIN 4, BTB-POZ
and MATH domain 4		 0.79 0.31 -0.31
56 AT4G33090 aminopeptidase M1 aminopeptidase M1, AMINOPEPTIDASE
M1		 0.79 0.32 -0.32
57 AT2G20920 Protein of unknown function (DUF3353) 0.79 0.33 -0.32
58 AT1G70480 Domain of unknown function (DUF220) 0.79 0.31 -0.31
59 AT1G26540 Agenet domain-containing protein -0.79 0.3 -0.3
60 AT1G75300 NmrA-like negative transcriptional regulator family protein 0.78 0.31 -0.32
61 AT5G52890 AT hook motif-containing protein -0.78 0.31 -0.31
62 AT4G10610 CTC-interacting domain 12 ATRBP37, CTC-interacting domain
12, RNA-BINDING PROTEIN 37		 0.78 0.31 -0.32
63 AT1G06420 unknown protein; Has 1017 Blast hits to 654 proteins in 124
species: Archae - 0; Bacteria - 39; Metazoa - 232; Fungi -
69; Plants - 40; Viruses - 0; Other Eukaryotes - 637
(source: NCBI BLink).		 -0.78 0.32 -0.31
64 AT5G11960 Protein of unknown function (DUF803) 0.78 0.33 -0.3
65 AT1G29970 60S ribosomal protein L18A-1 60S ribosomal protein L18A-1 0.78 0.31 -0.33
66 AT1G21760 F-box protein 7 F-BOX PROTEIN 7, F-box protein 7 0.78 0.32 -0.32
67 AT1G50020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages;
Has 72 Blast hits to 72 proteins in 27 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.78 0.35 -0.32
68 AT4G35860 GTP-binding 2 GTP-binding 2, ATRAB2C, ATRABB1B,
GTP-binding 2		 0.78 0.3 -0.3
69 AT2G26800 Aldolase superfamily protein 0.78 0.34 -0.32
70 AT1G45050 Ubiquitin-conjugating enzyme family protein ATUBC2-1, Arabidopsis thaliana
ubiquitin-conjugating enzyme 15		 0.78 0.3 -0.31
71 AT2G24860 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.78 0.31 -0.3
72 AT4G03410 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.78 0.3 -0.32
73 AT1G60390 polygalacturonase 1 polygalacturonase 1 -0.77 0.32 -0.33
74 AT1G64405 unknown protein; Has 13 Blast hits to 13 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.77 0.32 -0.31
75 AT3G55110 ABC-2 type transporter family protein ATP-binding cassette G18 0.77 0.33 -0.32
76 AT2G36570 Leucine-rich repeat protein kinase family protein -0.77 0.29 -0.3
77 AT3G49750 receptor like protein 44 receptor like protein 44, receptor
like protein 44		 -0.77 0.3 -0.32
78 AT1G28200 FH interacting protein 1 FH interacting protein 1 0.77 0.31 -0.3
79 AT2G29450 glutathione S-transferase tau 5 AT103-1A, ARABIDOPSIS THALIANA
GLUTATHIONE S-TRANSFERASE TAU 1,
glutathione S-transferase tau 5,
glutathione S-transferase tau 5		 0.77 0.31 -0.31
80 AT3G06100 NOD26-like intrinsic protein 7;1 NOD26-like intrinsic protein 7;1,
NOD26-LIKE MIP 6, NOD26-LIKE MIP 8		 0.77 0.3 -0.31
81 AT5G50100 Putative thiol-disulphide oxidoreductase DCC 0.77 0.32 -0.33
82 AT1G49520 SWIB complex BAF60b domain-containing protein 0.77 0.33 -0.32
83 AT1G63480 AT hook motif DNA-binding family protein -0.76 0.3 -0.34
84 AT3G20240 Mitochondrial substrate carrier family protein -0.76 0.29 -0.31
85 AT1G02970 WEE1 kinase homolog ATWEE1, WEE1 kinase homolog -0.75 0.29 -0.34
86 AT3G18630 uracil dna glycosylase uracil dna glycosylase, uracil dna
glycosylase		 -0.75 0.32 -0.31
87 AT3G04480 endoribonucleases -0.75 0.32 -0.34
88 AT3G63440 cytokinin oxidase/dehydrogenase 6 CYTOKININ OXIDASE 6, ATCKX7,
cytokinin oxidase/dehydrogenase 6		 -0.74 0.32 -0.31
89 AT4G05400 copper ion binding -0.74 0.33 -0.31
90 AT5G66750 chromatin remodeling 1 ATDDM1, CHA1, CHROMATIN REMODELING
1, chromatin remodeling 1,
DECREASED DNA METHYLATION 1,
SOMNIFEROUS 1, SOM4		 -0.74 0.31 -0.31
91 AT5G04950 nicotianamine synthase 1 ARABIDOPSIS THALIANA NICOTIANAMINE
SYNTHASE 1, nicotianamine synthase
1		 -0.74 0.32 -0.31
92 AT2G39700 expansin A4 ATEXP4, expansin A4, ATHEXP ALPHA
1.6, expansin A4		 -0.74 0.33 -0.32
93 AT1G49910 Transducin/WD40 repeat-like superfamily protein BUB (BUDDING UNINHIBITED BY
BENZYMIDAZOL) 3.2		 -0.74 0.31 -0.33
94 AT3G20010 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 -0.74 0.3 -0.33
95 AT2G41820 Leucine-rich repeat protein kinase family protein -0.74 0.32 -0.31
96 AT4G36470 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.74 0.32 -0.3
97 AT5G44900 Toll-Interleukin-Resistance (TIR) domain family protein -0.73 0.31 -0.29
98 AT1G18250 Pathogenesis-related thaumatin superfamily protein ATLP-1 -0.73 0.31 -0.3
99 AT4G17340 tonoplast intrinsic protein 2;2 DELTA-TIP2, tonoplast intrinsic
protein 2;2		 -0.73 0.3 -0.33
100 AT4G37490 CYCLIN B1;1 CYCLIN 1, CYCB1, CYCLIN B1;1 -0.73 0.33 -0.33
101 AT2G28250 Protein kinase superfamily protein NCRK -0.72 0.31 -0.31
102 AT2G35600 BREVIS RADIX-like 1 ARABIDOPSIS THALIANA BREVIS RADIX
LIKE 1, BREVIS RADIX-like 1		 -0.72 0.33 -0.31
103 AT3G57490 Ribosomal protein S5 family protein -0.71 0.33 -0.34
104 AT3G53940 Mitochondrial substrate carrier family protein -0.71 0.33 -0.32
105 AT5G63540 Domain of unknown function (DUF1767) ATRMI1, BLAP75, RECQ MEDIATED
INSTABILITY 1		 -0.71 0.32 -0.3
106 AT4G11900 S-locus lectin protein kinase family protein -0.71 0.32 -0.3
107 AT5G46700 Tetraspanin family protein TETRASPANIN 1, TORNADO 2 -0.7 0.34 -0.33
108 AT2G41940 zinc finger protein 8 zinc finger protein 8 -0.7 0.32 -0.34
109 AT3G62050 Putative endonuclease or glycosyl hydrolase -0.7 0.33 -0.33
110 AT2G38090 Duplicated homeodomain-like superfamily protein -0.7 0.34 -0.31
111 AT1G72230 Cupredoxin superfamily protein -0.7 0.29 -0.32
112 AT1G65490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 23 Blast hits to 23 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.3 -0.32
113 AT5G50310 Galactose oxidase/kelch repeat superfamily protein -0.69 0.31 -0.31
114 AT1G79650 Rad23 UV excision repair protein family Arabidopsis thaliana aldehyde
oxidase 1, RADIATION SENSITIVE23B		 -0.69 0.31 -0.31
115 AT1G80870 Protein kinase superfamily protein -0.69 0.29 -0.32
116 AT1G27880 DEAD/DEAH box RNA helicase family protein -0.69 0.32 -0.33
117 AT2G44980 SNF2 domain-containing protein / helicase domain-containing
protein		 ALTERED SEED GERMINATION 3 -0.69 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
118 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		0.78 0.45 -0.47 C0220