AT4G08960 : -
Query Information
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AGICode AT4G08960
Description phosphotyrosyl phosphatase activator (PTPA) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G08960 phosphotyrosyl phosphatase activator (PTPA) family protein 1 0.31 -0.3
2 AT4G01130 GDSL-like Lipase/Acylhydrolase superfamily protein -0.7 0.32 -0.3
3 AT4G00520 Acyl-CoA thioesterase family protein -0.68 0.31 -0.31
4 AT4G27050 F-box/RNI-like superfamily protein 0.67 0.34 -0.29
5 AT4G04220 receptor like protein 46 receptor like protein 46, receptor
like protein 46		 -0.67 0.3 -0.32
6 AT5G20580 BEST Arabidopsis thaliana protein match is: FRIGIDA
interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast
hits to 167 proteins in 73 species: Archae - 0; Bacteria -
25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0;
Other Eukaryotes - 16 (source: NCBI BLink).		 -0.66 0.32 -0.33
7 AT1G49950 telomere repeat binding factor 1 TELOMERE REPEAT BINDING FACTOR 1,
telomere repeat binding factor 1		 -0.66 0.29 -0.32
8 AT1G56670 GDSL-like Lipase/Acylhydrolase superfamily protein -0.66 0.31 -0.32
9 AT1G14800 Nucleic acid-binding, OB-fold-like protein -0.66 0.32 -0.3
10 AT5G36930 Disease resistance protein (TIR-NBS-LRR class) family -0.66 0.33 -0.31
11 AT3G22231 pathogen and circadian controlled 1 PATHOGEN AND CIRCADIAN CONTROLLED
1		 -0.66 0.29 -0.33
12 AT3G55420 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.3 -0.31
13 AT1G48330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits
to 40 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.33 -0.3
14 AT5G05890 UDP-Glycosyltransferase superfamily protein -0.65 0.3 -0.31
15 AT1G48310 chromatin remodeling factor18 CHA18, chromatin remodeling
factor18		 0.64 0.29 -0.32
16 AT4G23220 cysteine-rich RLK (RECEPTOR-like protein kinase) 14 cysteine-rich RLK (RECEPTOR-like
protein kinase) 14		 -0.64 0.29 -0.32
17 AT5G42280 Cysteine/Histidine-rich C1 domain family protein -0.63 0.32 -0.31
18 AT3G55350 PIF / Ping-Pong family of plant transposases -0.63 0.31 -0.31
19 AT2G28960 Leucine-rich repeat protein kinase family protein -0.63 0.31 -0.3
20 AT4G02540 Cysteine/Histidine-rich C1 domain family protein -0.63 0.31 -0.31
21 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.63 0.3 -0.31
22 AT5G17880 disease resistance protein (TIR-NBS-LRR class) constitutive shade-avoidance1 -0.63 0.31 -0.34
23 AT1G48820 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.63 0.31 -0.34
24 AT1G61760 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.63 0.33 -0.32
25 AT5G16250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.63 0.31 -0.31
26 AT3G22240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22235.2); Has 177 Blast hits
to 177 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.31 -0.31
27 AT5G08565 Transcription initiation Spt4-like protein -0.63 0.29 -0.33
28 AT5G45260 Disease resistance protein (TIR-NBS-LRR class) ARABIDOPSIS THALIANA WRKY DOMAIN
PROTEIN 52, RESISTANT TO RALSTONIA
SOLANACEARUM 1, SENSITIVE TO LOW
HUMIDITY 1		 0.62 0.32 -0.3
29 AT4G02450 HSP20-like chaperones superfamily protein -0.62 0.32 -0.32
30 AT5G05750 DNAJ heat shock N-terminal domain-containing protein -0.62 0.32 -0.32
31 AT4G00550 digalactosyl diacylglycerol deficient 2 digalactosyl diacylglycerol
deficient 2		 0.62 0.31 -0.32
32 AT4G01790 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.62 0.3 -0.32
33 AT1G62830 LSD1-like 1 ARABIDOPSIS LYSINE-SPECIFIC
HISTONE DEMETHYLASE, ATSWP1,
LSD1-like 1, LYSINE-SPECIFIC
HISTONE DEMETHYLASE, SWP1		 -0.62 0.31 -0.32
34 AT5G24760 GroES-like zinc-binding dehydrogenase family protein 0.62 0.32 -0.28
35 AT3G08890 Protein of unknown function, DUF538 -0.62 0.32 -0.3
36 AT1G70890 MLP-like protein 43 MLP-like protein 43 -0.62 0.31 -0.3
37 AT2G37720 TRICHOME BIREFRINGENCE-LIKE 15 TRICHOME BIREFRINGENCE-LIKE 15 -0.62 0.31 -0.3
38 AT5G24580 Heavy metal transport/detoxification superfamily protein -0.62 0.32 -0.3
39 AT4G14600 Target SNARE coiled-coil domain protein -0.61 0.33 -0.32
40 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family -0.61 0.3 -0.3
41 AT4G19240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43280.1); Has 19 Blast hits
to 17 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.32 -0.32
42 AT4G19720 Glycosyl hydrolase family protein with chitinase insertion
domain		 -0.61 0.3 -0.32
43 AT1G59900 pyruvate dehydrogenase complex E1 alpha subunit pyruvate dehydrogenase complex E1
alpha subunit, pyruvate
dehydrogenase complex E1 alpha
subunit		 -0.61 0.31 -0.32
44 AT1G55910 zinc transporter 11 precursor zinc transporter 11 precursor -0.61 0.33 -0.32
45 AT2G30470 high-level expression of sugar-inducible gene 2 high-level expression of
sugar-inducible gene 2,
VP1/ABI3-LIKE 1		 0.61 0.3 -0.33
46 AT4G05050 ubiquitin 11 ubiquitin 11 -0.61 0.31 -0.33
47 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 -0.61 0.3 -0.31
48 AT4G13050 Acyl-ACP thioesterase -0.61 0.33 -0.32
49 AT3G55170 Ribosomal L29 family protein -0.6 0.3 -0.32
50 AT4G11100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03060.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.6 0.32 -0.31
51 AT1G74320 Protein kinase superfamily protein -0.6 0.31 -0.31
52 AT1G58150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: in 9 processes; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.3 -0.33
53 AT1G32300 D-arabinono-1,4-lactone oxidase family protein -0.6 0.32 -0.33
54 AT1G47790 F-box and associated interaction domains-containing protein -0.6 0.31 -0.3
55 AT5G12940 Leucine-rich repeat (LRR) family protein -0.6 0.3 -0.33
56 AT4G11080 HMG (high mobility group) box protein 3xHigh Mobility Group-box1 -0.6 0.31 -0.33
57 AT5G17870 plastid-specific 50S ribosomal protein 6 plastid-specific 50S ribosomal
protein 6		 -0.6 0.31 -0.29
58 AT5G28500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G04550.1); Has 109 Blast hits to 109 proteins in
49 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi -
0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.6 0.32 -0.3
59 AT5G07770 Actin-binding FH2 protein -0.59 0.29 -0.31
60 AT5G25270 Ubiquitin-like superfamily protein 0.59 0.31 -0.33
61 AT1G47250 20S proteasome alpha subunit F2 20S proteasome alpha subunit F2 -0.59 0.32 -0.32
62 AT3G27700 zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 0.59 0.3 -0.31
63 AT5G06280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.59 0.33 -0.32
64 AT1G55450 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.58 0.3 -0.31
65 AT4G05520 EPS15 homology domain 2 EPS15 homology domain 2, EPS15
homology domain 2		 -0.58 0.32 -0.32
66 AT3G12640 RNA binding (RRM/RBD/RNP motifs) family protein 0.58 0.35 -0.34
67 AT4G36630 Vacuolar sorting protein 39 EMBRYO DEFECTIVE 2754 0.58 0.3 -0.31
68 AT1G71340 PLC-like phosphodiesterases superfamily protein AtGDPD4, glycerophosphodiester
phosphodiesterase 4		 -0.58 0.34 -0.31
69 AT1G65290 mitochondrial acyl carrier protein 2 mitochondrial acyl carrier protein
2		 -0.58 0.34 -0.31
70 AT5G44150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink).		 0.58 0.3 -0.31
71 AT5G11930 Thioredoxin superfamily protein -0.58 0.32 -0.32
72 AT4G02790 GTP-binding family protein EMBRYO DEFECTIVE 3129 -0.57 0.32 -0.3
73 AT3G13220 ABC-2 type transporter family protein ATP-binding cassette G26,
AtABCG26, MSR02, WBC27		 0.57 0.31 -0.3
74 AT5G19950 Domain of unknown function (DUF1767) 0.57 0.29 -0.3
75 AT1G43170 ribosomal protein 1 ribosomal protein 1, embryo
defective 2207, ribosomal protein
1, RPL3A		 -0.57 0.32 -0.31
76 AT1G71350 eukaryotic translation initiation factor SUI1 family
protein		 0.57 0.31 -0.3
77 AT5G23230 nicotinamidase 2 nicotinamidase 2 -0.57 0.33 -0.32
78 AT4G11410 NAD(P)-binding Rossmann-fold superfamily protein -0.57 0.3 -0.31
79 AT5G49630 amino acid permease 6 amino acid permease 6 -0.56 0.31 -0.32
80 AT1G70570 anthranilate phosphoribosyltransferase, putative 0.56 0.33 -0.3
81 AT1G68370 Chaperone DnaJ-domain superfamily protein ALTERED RESPONSE TO GRAVITY 1 -0.56 0.33 -0.31
82 AT5G08500 Transmembrane CLPTM1 family protein 0.56 0.32 -0.32
83 AT4G00440 Protein of unknown function (DUF3741) -0.56 0.31 -0.29
84 AT1G67940 non-intrinsic ABC protein 3 ATP-binding cassette I17,
non-intrinsic ABC protein 3,
AtSTAR1, ARABIDOPSIS THALIANA
NON-INTRINSIC ABC PROTEIN 3,
non-intrinsic ABC protein 3		 -0.56 0.33 -0.32
85 AT1G61260 Protein of unknown function (DUF761) -0.56 0.31 -0.32
86 AT5G55790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G45163.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.56 0.31 -0.34
87 AT4G12840 Protein of unknown function (DUF707) -0.56 0.31 -0.3
88 AT5G43310 COP1-interacting protein-related 0.56 0.32 -0.32
89 AT1G51920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED
DURING: 4 anthesis; Has 22 Blast hits to 22 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.31 -0.32
90 AT5G37710 alpha/beta-Hydrolases superfamily protein 0.55 0.31 -0.32
91 AT1G62360 KNOX/ELK homeobox transcription factor BUMBERSHOOT, BUMBERSHOOT 1,
SHOOTLESS, SHOOT MERISTEMLESS,
WALDMEISTER, WALDMEISTER 1		 -0.55 0.3 -0.31
92 AT3G30180 brassinosteroid-6-oxidase 2 brassinosteroid-6-oxidase 2,
CYP85A2		 0.55 0.32 -0.3
93 AT4G36480 long-chain base1 long-chain base1, EMBRYO DEFECTIVE
2779, FUMONISIN B1 RESISTANT 11,
long-chain base1		 0.55 0.33 -0.3
94 AT5G48550 F-box associated ubiquitination effector family protein -0.55 0.33 -0.3
95 AT5G24530 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 DOWNY MILDEW RESISTANT 6 -0.54 0.3 -0.32
96 AT3G53710 ARF-GAP domain 6 ARF-GAP domain 6 -0.54 0.32 -0.32
97 AT4G22280 F-box/RNI-like superfamily protein 0.54 0.31 -0.32
98 AT3G09735 S1FA-like DNA-binding protein -0.54 0.33 -0.31
99 AT2G04710 transposable element gene 0.54 0.31 -0.3
100 AT5G35840 phytochrome C phytochrome C -0.54 0.32 -0.32
101 AT3G24800 proteolysis 1 proteolysis 1 0.54 0.3 -0.31
102 AT1G80550 Pentatricopeptide repeat (PPR) superfamily protein 0.54 0.34 -0.29
103 AT1G66540 Cytochrome P450 superfamily protein -0.54 0.3 -0.32
104 AT5G03370 acylphosphatase family -0.53 0.31 -0.31
105 ATMG00060 NADH dehydrogenase subunit 5C NADH DEHYDROGENASE SUBUNIT 5, NADH
DEHYDROGENASE SUBUNIT 5.3, NADH
dehydrogenase subunit 5C		 0.53 0.32 -0.31
106 AT4G09390 transposable element gene -0.53 0.32 -0.32
107 AT5G66640 DA1-related protein 3 DA1-related protein 3 -0.53 0.28 -0.32
108 AT4G32760 ENTH/VHS/GAT family protein 0.52 0.29 -0.33
109 AT3G22121 other RNA 0.51 0.31 -0.32
110 AT3G19240 Vacuolar import/degradation, Vid27-related protein 0.51 0.34 -0.32
111 AT2G25930 hydroxyproline-rich glycoprotein family protein EARLY FLOWERING 3, PYK20 0.51 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
112 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine -0.81 0.44 -0.48 C0038
113 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine -0.73 0.49 -0.45 C0033
114 C0183 MST_3033.1 - - - -0.72 0.45 -0.43
115 C0244 Sucrose D-Sucrose Sucrose stachyose biosynthesis,
fructan degradation,
stachyose degradation,
galactose degradation III,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
sucrose degradation III,
UDP-glucose biosynthesis (from sucrose),
ajugose biosynthesis II (galactinol-independent),
sucrose biosynthesis I 		-0.6 0.32 -0.33 C0244
116 C0255 Trehalose α,α-D-Trehalose Trehalose trehalose degradation II (trehalase),
trehalose biosynthesis I 		-0.56 0.33 -0.34 C0255
117 C0034 4-Methylthio-n-butylglucosinolate - 4-Methylthiobutyl glucosinolate glucosinolate biosynthesis from dihomomethionine -0.53 0.3 -0.32 C0034