AT4G08110 : -
Query Information
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AGICode AT4G08110
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G08110 transposable element gene 1 0.32 -0.32
2 AT4G05050 ubiquitin 11 ubiquitin 11 0.86 0.32 -0.32
3 AT4G03050 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 AOP3 -0.82 0.33 -0.33
4 AT4G02540 Cysteine/Histidine-rich C1 domain family protein 0.8 0.35 -0.34
5 AT4G01130 GDSL-like Lipase/Acylhydrolase superfamily protein 0.76 0.29 -0.33
6 AT4G02450 HSP20-like chaperones superfamily protein 0.74 0.33 -0.29
7 AT4G05520 EPS15 homology domain 2 EPS15 homology domain 2, EPS15
homology domain 2		 0.73 0.32 -0.31
8 AT4G05460 RNI-like superfamily protein 0.71 0.32 -0.34
9 AT4G00440 Protein of unknown function (DUF3741) 0.71 0.34 -0.32
10 AT1G60710 NAD(P)-linked oxidoreductase superfamily protein ATB2 0.7 0.32 -0.28
11 AT4G05040 ankyrin repeat family protein 0.7 0.31 -0.3
12 AT4G03820 Protein of unknown function (DUF3537) 0.69 0.32 -0.34
13 AT4G02070 MUTS homolog 6 ARABIDOPSIS THALIANA MUTS HOMOLOG
6, MUTS homolog 6, MUTS HOMOLOG
6-1		 0.68 0.3 -0.3
14 AT4G03060 AOP2 (ALKENYL HYDROXALKYL PRODUCING 2); oxidoreductase,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and
incorporation of one atom each of oxygen into both donors		 alkenyl hydroxalkyl producing 2 0.65 0.31 -0.34
15 AT1G58270 TRAF-like family protein ZW9 0.65 0.32 -0.31
16 AT4G08280 Thioredoxin superfamily protein 0.64 0.31 -0.32
17 AT4G05320 polyubiquitin 10 polyubiquitin 10 0.64 0.3 -0.31
18 AT4G04850 K+ efflux antiporter 3 ATKEA3, K+ efflux antiporter 3 0.64 0.3 -0.3
19 AT4G13460 SU(VAR)3-9 homolog 9 SETDOMAIN GROUP 22, SET22,
SU(VAR)3-9 homolog 9		 0.63 0.31 -0.31
20 AT5G20070 nudix hydrolase homolog 19 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 19, nudix
hydrolase homolog 19, nudix
hydrolase homolog 19		 0.63 0.33 -0.31
21 AT4G09950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.62 0.32 -0.31
22 AT4G00520 Acyl-CoA thioesterase family protein 0.62 0.3 -0.32
23 AT3G06433 pseudogene of nodulin MtN3 family protein 0.62 0.32 -0.33
24 AT4G04220 receptor like protein 46 receptor like protein 46, receptor
like protein 46		 0.62 0.32 -0.32
25 AT1G58150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: in 9 processes; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.32 -0.29
26 AT4G01910 Cysteine/Histidine-rich C1 domain family protein 0.6 0.32 -0.34
27 ATMG00670 hypothetical protein ORF275 -0.6 0.33 -0.31
28 AT4G00050 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 unfertilized embryo sac 10 0.6 0.3 -0.3
29 AT4G25100 Fe superoxide dismutase 1 ARABIDOPSIS FE SUPEROXIDE
DISMUTASE 1, Fe superoxide
dismutase 1		 0.6 0.31 -0.31
30 AT4G09680 conserved telomere maintenance component 1 ATCTC1, conserved telomere
maintenance component 1		 0.6 0.31 -0.31
31 AT5G17890 DA1-related protein 4 CHILLING SENSITIVE 3, DA1-related
protein 4		 0.59 0.32 -0.3
32 AT5G40500 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.59 0.31 -0.32
33 AT5G35730 EXS (ERD1/XPR1/SYG1) family protein 0.59 0.32 -0.3
34 AT5G39100 germin-like protein 6 germin-like protein 6 -0.59 0.3 -0.31
35 AT5G03690 Aldolase superfamily protein -0.59 0.31 -0.32
36 AT4G01860 Transducin family protein / WD-40 repeat family protein 0.58 0.31 -0.32
37 AT1G56580 Protein of unknown function, DUF538 SMALLER WITH VARIABLE BRANCHES 0.58 0.3 -0.33
38 AT5G42280 Cysteine/Histidine-rich C1 domain family protein 0.57 0.3 -0.34
39 AT1G63050 MBOAT (membrane bound O-acyl transferase) family protein -0.57 0.32 -0.31
40 AT5G39990 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.56 0.31 -0.32
41 AT4G01650 Polyketide cyclase / dehydrase and lipid transport protein 0.56 0.32 -0.31
42 AT3G05170 Phosphoglycerate mutase family protein 0.56 0.31 -0.3
43 AT2G05350 unknown protein; Has 22 Blast hits to 16 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.56 0.32 -0.31
44 AT4G32960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits
to 106 proteins in 39 species: Archae - 0; Bacteria - 0;
Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.56 0.31 -0.31
45 AT1G66540 Cytochrome P450 superfamily protein 0.56 0.34 -0.32
46 AT1G36550 transposable element gene 0.56 0.31 -0.32
47 AT4G00900 ER-type Ca2+-ATPase 2 ARABIDOPSIS THALIANA ER-TYPE
CA2+-ATPASE 2, ER-type Ca2+-ATPase
2		 0.55 0.3 -0.31
48 AT1G58160 Mannose-binding lectin superfamily protein 0.55 0.32 -0.31
49 AT5G06560 Protein of unknown function, DUF593 -0.55 0.32 -0.3
50 AT3G09640 ascorbate peroxidase 2 ASCORBATE PEROXIDASE 1B, ascorbate
peroxidase 2		 0.55 0.31 -0.32
51 AT5G45690 Protein of unknown function (DUF1264) 0.54 0.3 -0.31
52 AT4G12460 OSBP(oxysterol binding protein)-related protein 2B OSBP(oxysterol binding
protein)-related protein 2B		 0.54 0.32 -0.32
53 AT1G47270 tubby like protein 6 tubby like protein 6, tubby like
protein 6		 0.54 0.31 -0.31
54 AT1G65280 DNAJ heat shock N-terminal domain-containing protein 0.54 0.32 -0.31
55 AT5G23460 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.53 0.33 -0.34
56 AT1G62510 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.53 0.34 -0.33
57 AT5G03200 RING/U-box superfamily protein 0.53 0.32 -0.33
58 AT3G28910 myb domain protein 30 ATMYB30, myb domain protein 30 -0.53 0.32 -0.33
59 AT5G41170 Pentatricopeptide repeat (PPR-like) superfamily protein 0.52 0.32 -0.32
60 AT4G00335 RING-H2 finger B1A RING-H2 finger B1A -0.52 0.33 -0.32
61 AT4G01500 AP2/B3-like transcriptional factor family protein NGATHA4 -0.52 0.32 -0.32
62 AT1G23670 Domain of unknown function (DUF220) 0.52 0.32 -0.33
63 AT4G31615 Transcriptional factor B3 family protein 0.52 0.32 -0.32
64 AT4G00980 zinc knuckle (CCHC-type) family protein 0.51 0.32 -0.31
65 AT1G31350 KAR-UP F-box 1 KAR-UP F-box 1 -0.51 0.31 -0.31
66 AT4G07400 VIER F-box proteine 3 VIER F-box proteine 3 -0.51 0.32 -0.29
67 AT3G07790 DGCR14-related -0.51 0.32 -0.34
68 AT1G77080 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 27, FLOWERING LOCUS
M, MADS AFFECTING FLOWERING 1		 0.51 0.32 -0.32
69 AT5G07200 gibberellin 20-oxidase 3 ARABIDOPSIS THALIANA GIBBERELLIN
20-OXIDASE 3, gibberellin
20-oxidase 3, YAP169		 -0.5 0.32 -0.31
70 AT1G51460 ABC-2 type transporter family protein ATP-binding cassette G13 0.5 0.29 -0.29
71 AT4G04770 ATP binding cassette protein 1 ATP binding cassette protein 1,
ATP-binding cassette I8, ATP
binding cassette protein 1,
ARABIDOPSIS THALIANA NUCLEOSOME
ASSEMBLY PROTEIN 1, LONG AFTER FR		 0.5 0.34 -0.31
72 AT4G25620 hydroxyproline-rich glycoprotein family protein -0.49 0.3 -0.32
73 AT4G09090 Carbohydrate-binding X8 domain superfamily protein -0.48 0.3 -0.3
74 AT3G07650 CONSTANS-like 9 CONSTANS-like 9 -0.48 0.29 -0.33
75 AT1G52770 Phototropic-responsive NPH3 family protein -0.47 0.31 -0.33
76 AT3G42360 transposable element gene -0.46 0.33 -0.3
77 AT4G22960 Protein of unknown function (DUF544) -0.46 0.31 -0.31
78 AT5G46550 DNA-binding bromodomain-containing protein -0.46 0.31 -0.3
79 AT5G43500 actin-related protein 9 actin-related protein 9,
actin-related protein 9		 -0.46 0.3 -0.33
80 AT4G32230 unknown protein; Has 14 Blast hits to 14 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.46 0.32 -0.31
81 AT3G32130 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
Ribonuclease H-like superfamily protein (TAIR:AT3G25270.1);
Has 95 Blast hits to 95 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.45 0.33 -0.31
82 AT1G11960 ERD (early-responsive to dehydration stress) family protein -0.44 0.31 -0.35
83 AT1G33520 D111/G-patch domain-containing protein modifier of snc1, 2 -0.44 0.31 -0.32
84 AT2G46310 cytokinin response factor 5 cytokinin response factor 5 -0.44 0.31 -0.33
85 AT4G30430 tetraspanin9 tetraspanin9 -0.43 0.33 -0.3
86 AT5G43790 Pentatricopeptide repeat (PPR) superfamily protein -0.43 0.29 -0.29
87 AT4G32300 S-domain-2 5 S-domain-2 5 -0.43 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
88 C0094 Galactosamine D-Galactosamine - - 0.77 0.42 -0.45
89 C0030 3-Methylsulfinyl-n-propylglucosinolate - 3-Methylsulfinylpropyl-glucosinolate glucosinolate biosynthesis from homomethionine 0.72 0.45 -0.47 C0030
90 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		0.71 0.43 -0.44 C0056
91 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis 0.7 0.44 -0.45 C0234
92 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) 0.68 0.45 -0.43 C0099