AT4G04840 : methionine sulfoxide reductase B6
Query Information
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AGICode AT4G04840
Description methionine sulfoxide reductase B6
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G04840 methionine sulfoxide reductase B6 methionine sulfoxide reductase B6,
methionine sulfoxide reductase B6		 1 0.31 -0.33
2 AT5G56490 D-arabinono-1,4-lactone oxidase family protein 0.77 0.33 -0.3
3 AT1G78300 general regulatory factor 2 14-3-3 PROTEIN G-BOX FACTOR14
OMEGA, GF14 OMEGA, general
regulatory factor 2		 0.74 0.32 -0.34
4 AT4G23493 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.74 0.3 -0.32
5 AT5G45380 solute:sodium symporters;urea transmembrane transporters ATDUR3, DEGRADATION OF UREA 3 -0.73 0.31 -0.33
6 AT4G03760 transposable element gene 0.72 0.32 -0.33
7 AT1G30480 D111/G-patch domain-containing protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 111		 0.72 0.31 -0.31
8 AT3G61130 galacturonosyltransferase 1 galacturonosyltransferase 1, LGT1 0.71 0.3 -0.28
9 AT3G13800 Metallo-hydrolase/oxidoreductase superfamily protein 0.71 0.32 -0.33
10 AT5G62350 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.7 0.33 -0.31
11 AT3G06650 ATP-citrate lyase B-1 ATP-citrate lyase B-1 0.7 0.32 -0.31
12 AT2G20810 galacturonosyltransferase 10 galacturonosyltransferase 10, LGT4 0.69 0.32 -0.32
13 AT5G05820 Nucleotide-sugar transporter family protein 0.69 0.33 -0.31
14 AT3G07490 ARF-GAP domain 11 ARF-GAP domain 11, AtCML3,
calmodulin-like 3		 0.69 0.3 -0.28
15 AT5G49720 glycosyl hydrolase 9A1 glycosyl hydrolase 9A1, DEFECTIVE
CYTOKINESIS, glycosyl hydrolase
9A1, IRREGULAR XYLEM 2, KORRIGAN,
KORRIGAN 1, RADIALLY SWOLLEN 2,
TUMOROUS SHOOT DEVELOPMENT 1		 0.69 0.32 -0.32
16 AT1G73680 alpha dioxygenase alpha dioxygenase -0.69 0.31 -0.33
17 AT4G20880 ethylene-responsive nuclear protein / ethylene-regulated
nuclear protein (ERT2)		 -0.68 0.31 -0.32
18 AT5G14080 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.3 -0.3
19 AT4G26300 Arginyl-tRNA synthetase, class Ic embryo defective 1027 0.68 0.33 -0.33
20 AT1G10670 ATP-citrate lyase A-1 ATP-citrate lyase A-1 0.68 0.32 -0.33
21 AT3G08870 Concanavalin A-like lectin protein kinase family protein -0.68 0.33 -0.34
22 AT5G25100 Endomembrane protein 70 protein family 0.67 0.31 -0.33
23 AT3G16030 lectin protein kinase family protein CALLUS EXPRESSION OF RBCS 101 -0.67 0.31 -0.32
24 AT3G54690 Sugar isomerase (SIS) family protein SETH3 0.67 0.3 -0.3
25 AT5G43720 Protein of unknown function (DUF2361) 0.67 0.29 -0.32
26 AT5G02650 BEST Arabidopsis thaliana protein match is: Telomerase
activating protein Est1 (TAIR:AT1G28260.2); Has 20 Blast
hits to 20 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.31 -0.31
27 AT1G54310 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.67 0.32 -0.32
28 AT3G17900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 45
Blast hits to 44 proteins in 14 species: Archae - 0;
Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink).		 0.67 0.31 -0.32
29 AT2G17410 ARID/BRIGHT DNA-binding domain-containing protein 0.66 0.32 -0.31
30 AT1G14290 sphingoid base hydroxylase 2 sphingoid base hydroxylase 2 0.66 0.32 -0.31
31 AT3G13490 Lysyl-tRNA synthetase, class II ARABIDOPSIS THALIANA LYSYL-TRNA
SYNTHETASE 2, OVULE ABORTION 5		 0.66 0.31 -0.32
32 AT2G03870 Small nuclear ribonucleoprotein family protein EMBRYO DEFECTIVE 2816 0.65 0.31 -0.31
33 AT3G12920 SBP (S-ribonuclease binding protein) family protein BOI-related gene 3 0.65 0.31 -0.31
34 AT5G06970 Protein of unknown function (DUF810) 0.65 0.33 -0.31
35 AT3G05800 AtBS1(activation-tagged BRI1 suppressor 1)-interacting
factor 1		 AtBS1(activation-tagged BRI1
suppressor 1)-interacting factor 1		 0.65 0.31 -0.3
36 AT2G18350 homeobox protein 24 homeobox protein 24, homeobox
protein 24, ZINC FINGER
HOMEODOMAIN 6		 0.65 0.33 -0.3
37 AT1G66740 ASF1 like histone chaperone ANTI- SILENCING FUNCTION 1A,
AtSP7, SGA2, SP7		 0.65 0.32 -0.28
38 AT5G53550 YELLOW STRIPE like 3 YELLOW STRIPE LIKE 3, YELLOW
STRIPE like 3		 -0.65 0.33 -0.32
39 AT2G39710 Eukaryotic aspartyl protease family protein -0.65 0.31 -0.31
40 AT5G11800 K+ efflux antiporter 6 ARABIDOPSIS THALIANA K+ EFFLUX
ANTIPORTER 6, K+ efflux antiporter
6		 0.64 0.32 -0.31
41 AT4G22580 Exostosin family protein 0.64 0.32 -0.32
42 AT5G25360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.64 0.3 -0.3
43 AT3G61640 arabinogalactan protein 20 arabinogalactan protein 20,
Arabinogalactan protein 20		 0.64 0.32 -0.32
44 AT2G38320 TRICHOME BIREFRINGENCE-LIKE 34 TRICHOME BIREFRINGENCE-LIKE 34 0.64 0.32 -0.32
45 AT3G11700 FASCICLIN-like arabinogalactan protein 18 precursor FASCICLIN-like arabinogalactan
protein 18 precursor		 0.64 0.33 -0.33
46 AT3G19020 Leucine-rich repeat (LRR) family protein 0.63 0.3 -0.31
47 AT3G05980 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits
to 202 proteins in 28 species: Archae - 0; Bacteria - 0;
Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 0.63 0.3 -0.32
48 AT2G28370 Uncharacterised protein family (UPF0497) 0.63 0.31 -0.3
49 AT5G03415 Transcription factor DP ATDPB, DPB 0.63 0.31 -0.3
50 AT5G36290 Uncharacterized protein family (UPF0016) 0.63 0.31 -0.3
51 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1		 0.63 0.32 -0.32
52 AT1G65270 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 13 growth stages; Has
149 Blast hits to 149 proteins in 49 species: Archae - 0;
Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 47; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.63 0.32 -0.32
53 AT5G04190 phytochrome kinase substrate 4 phytochrome kinase substrate 4 0.63 0.31 -0.31
54 AT4G26090 NB-ARC domain-containing disease resistance protein RESISTANT TO P. SYRINGAE 2 -0.62 0.29 -0.3
55 AT2G05820 transposable element gene -0.62 0.31 -0.3
56 AT5G38780 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.62 0.35 -0.33
57 AT2G43570 chitinase, putative chitinase, putative -0.62 0.32 -0.31
58 AT1G01830 ARM repeat superfamily protein -0.62 0.32 -0.34
59 AT4G16515 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 6 0.62 0.31 -0.33
60 AT3G26220 cytochrome P450, family 71, subfamily B, polypeptide 3 cytochrome P450, family 71,
subfamily B, polypeptide 3		 -0.62 0.29 -0.31
61 AT2G25800 Protein of unknown function (DUF810) 0.62 0.32 -0.32
62 AT2G18450 succinate dehydrogenase 1-2 succinate dehydrogenase 1-2 0.61 0.3 -0.31
63 AT3G12530 PSF2 PSF2 0.61 0.31 -0.31
64 AT3G22990 ARM repeat superfamily protein LEAF AND FLOWER RELATED 0.61 0.31 -0.33
65 AT2G44880 Pentatricopeptide repeat (PPR-like) superfamily protein 0.61 0.31 -0.35
66 AT5G59010 Protein kinase protein with tetratricopeptide repeat domain 0.61 0.33 -0.3
67 AT3G25850 Cysteine/Histidine-rich C1 domain family protein 0.61 0.33 -0.31
68 AT4G05340 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.61 0.33 -0.32
69 AT2G43190 ribonuclease P family protein 0.61 0.31 -0.3
70 AT2G26830 Protein kinase superfamily protein embryo defective 1187 0.61 0.31 -0.31
71 AT1G41900 transposable element gene -0.6 0.32 -0.32
72 AT1G31820 Amino acid permease family protein -0.6 0.31 -0.31
73 AT3G60790 F-box family protein -0.59 0.3 -0.31
74 AT3G20100 cytochrome P450, family 705, subfamily A, polypeptide 19 cytochrome P450, family 705,
subfamily A, polypeptide 19		 -0.59 0.32 -0.31
75 AT5G34940 glucuronidase 3 glucuronidase 3, glucuronidase 3 -0.59 0.31 -0.33
76 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.31 -0.31
77 AT5G59700 Protein kinase superfamily protein -0.58 0.31 -0.32
78 AT5G60900 receptor-like protein kinase 1 receptor-like protein kinase 1 -0.58 0.31 -0.32
79 AT5G53870 early nodulin-like protein 1 AtENODL1, early nodulin-like
protein 1		 -0.58 0.33 -0.31
80 AT5G10380 RING/U-box superfamily protein ATRING1, RING1 -0.57 0.32 -0.33
81 AT1G74440 Protein of unknown function (DUF962) -0.57 0.3 -0.32
82 AT3G10100 transposable element gene -0.57 0.32 -0.32
83 AT2G28890 poltergeist like 4 poltergeist like 4 -0.57 0.32 -0.32
84 AT5G18840 Major facilitator superfamily protein -0.57 0.31 -0.33
85 AT2G25000 WRKY DNA-binding protein 60 ATWRKY60, WRKY DNA-binding protein
60		 -0.57 0.32 -0.31
86 AT4G25800 Calmodulin-binding protein -0.57 0.31 -0.33
87 AT3G51860 cation exchanger 3 ATCAX3, ATHCX1, CAX1-LIKE, cation
exchanger 3		 -0.57 0.32 -0.3
88 AT2G26170 cytochrome P450, family 711, subfamily A, polypeptide 1 cytochrome P450, family 711,
subfamily A, polypeptide 1, MORE
AXILLARY BRANCHES 1		 -0.56 0.3 -0.31
89 AT1G07380 Neutral/alkaline non-lysosomal ceramidase -0.56 0.31 -0.34
90 AT2G14560 Protein of unknown function (DUF567) LATE UPREGULATED IN RESPONSE TO
HYALOPERONOSPORA PARASITICA		 -0.56 0.32 -0.33
91 AT1G70250 receptor serine/threonine kinase, putative -0.55 0.3 -0.32
92 AT4G15755 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.55 0.31 -0.31
93 AT3G60690 SAUR-like auxin-responsive protein family -0.55 0.28 -0.34
94 AT3G28540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.55 0.32 -0.3
95 AT3G22930 calmodulin-like 11 calmodulin-like 11 -0.54 0.31 -0.32
96 AT1G64620 Dof-type zinc finger DNA-binding family protein -0.54 0.32 -0.32
97 AT5G63580 flavonol synthase 2 ATFLS2, flavonol synthase 2 -0.54 0.33 -0.31
98 AT1G52790 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.54 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
99 C0138 Linarin - - - 0.66 0.45 -0.42
100 C0221 Quercetin-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside Quercetin-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside - quercetin glucoside biosynthesis (Arabidopsis) -0.63 0.47 -0.46
101 C0231 Serine D,L-Serine D-Serine; L-Serine sphingolipid biosynthesis (plants),
folate polyglutamylation,
tryptophan biosynthesis,
phospholipid biosynthesis II,
homocysteine and cysteine interconversion,
photorespiration,
seleno-amino acid biosynthesis,
glycine biosynthesis,
tRNA charging,
serine racemization,
phosphatidylethanolamine biosynthesis I,
serine biosynthesis,
choline biosynthesis I,
cysteine biosynthesis I,
folate transformations II 		-0.54 0.28 -0.3 C0231