AT4G03760 : -
Query Information
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AGICode AT4G03760
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G03760 transposable element gene 1 0.33 -0.29
2 AT3G19020 Leucine-rich repeat (LRR) family protein 0.75 0.3 -0.3
3 AT4G04840 methionine sulfoxide reductase B6 methionine sulfoxide reductase B6,
methionine sulfoxide reductase B6		 0.72 0.3 -0.31
4 AT4G22680 myb domain protein 85 myb domain protein 85, myb domain
protein 85		 -0.71 0.32 -0.29
5 AT1G02340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 FBI1, LONG HYPOCOTYL IN FAR-RED,
REDUCED PHYTOCHROME SIGNALING 1,
REDUCED SENSITIVITY TO FAR-RED
LIGHT 1		 0.71 0.3 -0.32
6 AT5G64710 Putative endonuclease or glycosyl hydrolase 0.71 0.29 -0.3
7 AT5G65070 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 69, FCL4, MADS
AFFECTING FLOWERING 4		 0.71 0.31 -0.33
8 AT4G07790 transposable element gene 0.71 0.32 -0.32
9 AT1G04750 vesicle-associated membrane protein 721 AT VAMP7B, ATVAMP721,
vesicle-associated membrane
protein 721, VESICLE-ASSOCIATED
MEMBRANE PROTEIN 7B		 0.71 0.33 -0.31
10 AT1G52840 transposable element gene 0.7 0.3 -0.33
11 AT5G04880 pseudogene of ABC transporter family protein -0.69 0.32 -0.32
12 AT5G37960 GroES-like family protein -0.69 0.32 -0.3
13 AT1G66150 transmembrane kinase 1 transmembrane kinase 1 0.69 0.3 -0.33
14 AT1G01230 ORMDL family protein 0.69 0.32 -0.32
15 AT3G13520 arabinogalactan protein 12 arabinogalactan protein 12,
ATAGP12		 0.69 0.34 -0.3
16 AT3G04780 Protein of unknown function (DUF1000) 0.68 0.3 -0.32
17 AT5G25370 phospholipase D alpha 3 phospholipase D alpha 3 0.68 0.31 -0.31
18 AT2G15360 BEST Arabidopsis thaliana protein match is:
fucosyltransferase 4 (TAIR:AT2G15390.2); Has 38 Blast hits
to 35 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.31 -0.33
19 AT5G08210 MIR834a; miRNA microRNA834A -0.68 0.34 -0.32
20 AT3G05280 Integral membrane Yip1 family protein 0.68 0.3 -0.3
21 AT1G65940 pseudogene, similar to Dof zinc finger protein, blastp
match of 61% identity and 1.7e-10 P-value to
GP|4996646|dbj|BAA78575.1||AB028132 Dof zinc finger protein
{Oryza sativa}		 0.67 0.31 -0.33
22 AT5G24880 BEST Arabidopsis thaliana protein match is:
calmodulin-binding protein-related (TAIR:AT5G10660.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.67 0.32 -0.32
23 AT3G15040 Protein of unknown function, DUF584 0.67 0.31 -0.31
24 AT1G06390 GSK3/SHAGGY-like protein kinase 1 ATGSK1, A. THALIANA SHAGGY-LIKE
KINASE GROUP 2 3, SHAGGY-LIKE
PROTEIN KINASE 22, BIN2-LIKE 2,
GSK3/SHAGGY-like protein kinase 1,
SHAGGY-LIKE PROTEIN KINASE 22		 0.67 0.31 -0.3
25 AT2G40620 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.66 0.3 -0.31
26 AT2G39240 RNA polymerase I specific transcription initiation factor
RRN3 protein		 0.66 0.31 -0.33
27 AT4G35420 dihydroflavonol 4-reductase-like1 dihydroflavonol 4-reductase-like1,
tetraketide alpha-pyrone reductase
1		 -0.66 0.3 -0.33
28 AT2G35990 Putative lysine decarboxylase family protein LONELY GUY 2 0.66 0.31 -0.29
29 AT3G01580 Tetratricopeptide repeat (TPR)-like superfamily protein 0.66 0.33 -0.3
30 AT4G08490 transposable element gene -0.66 0.31 -0.34
31 AT4G04150 transposable element gene -0.66 0.3 -0.31
32 AT4G16515 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 6 0.66 0.28 -0.34
33 AT1G10670 ATP-citrate lyase A-1 ATP-citrate lyase A-1 0.66 0.32 -0.3
34 AT4G00460 RHO guanyl-nucleotide exchange factor 3 ATROPGEF3, RHO guanyl-nucleotide
exchange factor 3		 0.65 0.29 -0.31
35 AT2G38480 Uncharacterised protein family (UPF0497) 0.65 0.33 -0.32
36 AT5G05150 autophagy-related gene 18E ARABIDOPSIS THALIANA HOMOLOG OF
YEAST AUTOPHAGY 18E,
autophagy-related gene 18E,
autophagy-related gene 18E		 0.65 0.33 -0.3
37 AT4G26880 Stigma-specific Stig1 family protein 0.64 0.29 -0.31
38 AT1G26270 Phosphatidylinositol 3- and 4-kinase family protein 0.64 0.3 -0.34
39 AT5G58910 laccase 16 laccase 16 0.64 0.31 -0.31
40 AT5G56490 D-arabinono-1,4-lactone oxidase family protein 0.64 0.32 -0.31
41 AT1G07460 Concanavalin A-like lectin family protein 0.64 0.3 -0.28
42 AT2G15700 transposable element gene -0.64 0.32 -0.32
43 AT2G27350 OTU-like cysteine protease family protein otubain-like deubiquitinase 1 -0.63 0.32 -0.3
44 AT3G07490 ARF-GAP domain 11 ARF-GAP domain 11, AtCML3,
calmodulin-like 3		 0.63 0.32 -0.31
45 AT2G19700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.32 -0.33
46 AT5G12260 BEST Arabidopsis thaliana protein match is:
glycosyltransferase family protein 2 (TAIR:AT5G60700.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.63 0.34 -0.32
47 AT1G20400 Protein of unknown function (DUF1204) 0.63 0.34 -0.33
48 AT1G50950 Thioredoxin protein with domain of unknown function
(DUF1692)		 -0.63 0.3 -0.31
49 AT5G01690 cation/H+ exchanger 27 ARABIDOPSIS THALIANA
CATION/HYDROGEN EXCHANGER 27,
cation/H+ exchanger 27		 0.63 0.32 -0.29
50 AT3G60730 Plant invertase/pectin methylesterase inhibitor superfamily -0.63 0.31 -0.3
51 AT1G32950 Subtilase family protein 0.63 0.33 -0.33
52 AT1G64930 cytochrome P450, family 87, subfamily A, polypeptide 7 cytochrome P450, family 87,
subfamily A, polypeptide 7		 0.63 0.33 -0.31
53 AT2G14835 RING/U-box superfamily protein 0.62 0.29 -0.34
54 AT4G30320 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.62 0.32 -0.3
55 AT4G33370 DEA(D/H)-box RNA helicase family protein 0.62 0.29 -0.3
56 AT2G46860 pyrophosphorylase 3 pyrophosphorylase 3,
pyrophosphorylase 3		 0.62 0.29 -0.3
57 AT3G17090 Protein phosphatase 2C family protein 0.62 0.32 -0.31
58 AT2G37140 Terpenoid synthases superfamily protein 0.62 0.34 -0.33
59 AT1G49310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, petal
differentiation and expansion stage; Has 11 Blast hits to
11 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink).		 0.61 0.3 -0.32
60 AT2G04300 Leucine-rich repeat protein kinase family protein 0.61 0.32 -0.33
61 AT1G47920 RNI-like superfamily protein 0.61 0.32 -0.3
62 AT3G60790 F-box family protein -0.61 0.31 -0.32
63 AT5G14080 Tetratricopeptide repeat (TPR)-like superfamily protein -0.61 0.31 -0.31
64 AT3G05800 AtBS1(activation-tagged BRI1 suppressor 1)-interacting
factor 1		 AtBS1(activation-tagged BRI1
suppressor 1)-interacting factor 1		 0.61 0.31 -0.32
65 AT5G25500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.61 0.33 -0.31
66 AT1G36640 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sperm cell, root; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G36622.1); Has 14 Blast hits to 14 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.32 -0.3
67 AT4G22640 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.61 0.3 -0.3
68 AT2G44810 alpha/beta-Hydrolases superfamily protein DEFECTIVE ANTHER DEHISCENCE 1 -0.61 0.3 -0.33
69 AT2G18350 homeobox protein 24 homeobox protein 24, homeobox
protein 24, ZINC FINGER
HOMEODOMAIN 6		 0.61 0.33 -0.31
70 AT2G19550 alpha/beta-Hydrolases superfamily protein -0.61 0.32 -0.31
71 AT5G02550 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.61 0.3 -0.3
72 AT4G15370 baruol synthase 1 baruol synthase 1, PENTACYCLIC
TRITERPENE SYNTHASE 2		 0.61 0.31 -0.3
73 AT1G70060 SIN3-like 4 SIN3-like 4 0.61 0.31 -0.3
74 AT4G14180 putative recombination initiation defect 1 putative recombination initiation
defect 1, putative recombination
initiation defect 1		 -0.6 0.3 -0.29
75 AT1G41900 transposable element gene -0.6 0.31 -0.31
76 AT3G03670 Peroxidase superfamily protein 0.6 0.34 -0.32
77 AT3G12920 SBP (S-ribonuclease binding protein) family protein BOI-related gene 3 0.6 0.3 -0.3
78 AT4G13800 Protein of unknown function (DUF803) 0.6 0.33 -0.32
79 AT3G09660 minichromosome maintenance 8 minichromosome maintenance 8 -0.6 0.35 -0.3
80 AT1G19220 auxin response factor 19 AUXIN RESPONSE FACTOR11, auxin
response factor 19,
indole-3-acetic acid inducible 22		 0.6 0.32 -0.33
81 AT3G42060 myosin heavy chain-related -0.6 0.29 -0.3
82 AT3G28120 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.6 0.32 -0.29
83 AT3G45440 Concanavalin A-like lectin protein kinase family protein -0.59 0.31 -0.3
84 AT2G12300 transposable element gene -0.59 0.32 -0.32
85 AT5G62400 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.33 -0.31
86 AT5G62120 response regulator 23 response regulator 23, response
regulator 23		 -0.59 0.32 -0.31
87 AT3G44030 pseudogene, similar to OSJNBb0043H09.1, blastp match of 40%
identity and 8.4e-38 P-value to
GP|21740634|emb|CAD40195.1||AL606611 OSJNBb0043H09.1 {Oryza
sativa (japonica cultivar-group)}		 -0.57 0.34 -0.31
88 AT4G30030 Eukaryotic aspartyl protease family protein -0.57 0.31 -0.31
89 AT1G17600 Disease resistance protein (TIR-NBS-LRR class) family -0.57 0.31 -0.3
90 AT4G09360 NB-ARC domain-containing disease resistance protein -0.57 0.3 -0.31
91 AT3G49300 proline-rich family protein -0.57 0.32 -0.33
92 AT1G25270 nodulin MtN21 /EamA-like transporter family protein -0.57 0.3 -0.31
93 AT4G21050 Dof-type zinc finger domain-containing protein -0.56 0.32 -0.3
94 AT1G75760 ER lumen protein retaining receptor family protein -0.56 0.32 -0.31
95 AT1G63910 myb domain protein 103 myb domain protein 103, myb domain
protein 103		 -0.56 0.32 -0.32
96 AT1G77730 Pleckstrin homology (PH) domain superfamily protein -0.56 0.33 -0.29
97 AT1G31450 Eukaryotic aspartyl protease family protein -0.54 0.31 -0.33
98 AT3G29792 transposable element gene -0.54 0.32 -0.31
99 AT5G18840 Major facilitator superfamily protein -0.54 0.32 -0.3
100 AT5G17150 Cystatin/monellin superfamily protein -0.54 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
101 C0116 Hydroxylamine - Hydroxylamine - 0.69 0.43 -0.45 C0116
102 C0023 1,6-Anhydro-β-glucose 1,6-Anhydro-β-D-glucose Levoglucosan - -0.65 0.45 -0.47 C0023