AGICode | AT4G02890 |
Description | Ubiquitin family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G02890 | Ubiquitin family protein | UBQ14 | 1 | 0.32 | -0.32 | ||
2 | AT3G47420 | phosphate starvation-induced gene 3 | Glycerol-3-phosphate permease 1, phosphate starvation-induced gene 3, Glycerol-3-phosphate permease 1, phosphate starvation-induced gene 3 |
0.69 | 0.32 | -0.32 | ||
3 | AT4G02700 | sulfate transporter 3;2 | sulfate transporter 3;2 | 0.67 | 0.32 | -0.33 | ||
4 | AT1G66350 | RGA-like 1 | RGL, RGA-like 1 | 0.66 | 0.31 | -0.32 | ||
5 | AT3G52610 | unknown protein; Has 68 Blast hits to 67 proteins in 21 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.66 | 0.31 | -0.33 | |||
6 | AT1G02475 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
0.65 | 0.32 | -0.3 | |||
7 | AT3G14100 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.65 | 0.33 | -0.31 | |||
8 | AT2G31670 | Stress responsive alpha-beta barrel domain protein | 0.65 | 0.29 | -0.31 | |||
9 | AT1G13460 | Protein phosphatase 2A regulatory B subunit family protein | 0.64 | 0.32 | -0.3 | |||
10 | AT1G09950 | RESPONSE TO ABA AND SALT 1 | RESPONSE TO ABA AND SALT 1 | -0.64 | 0.3 | -0.32 | ||
11 | AT5G20150 | SPX domain gene 1 | ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX domain gene 1 |
0.64 | 0.31 | -0.33 | ||
12 | AT1G42480 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3456 (InterPro:IPR021852); Has 177 Blast hits to 177 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.64 | 0.31 | -0.32 | |||
13 | AT4G25490 | C-repeat/DRE binding factor 1 | ATCBF1, C-repeat/DRE binding factor 1, DRE BINDING PROTEIN 1B |
-0.64 | 0.33 | -0.33 | ||
14 | AT5G48810 | cytochrome B5 isoform D | ATB5-B, ARABIDOPSIS CYTOCHROME B5 ISOFORM D, B5 #3, cytochrome B5 isoform D |
0.63 | 0.33 | -0.33 | ||
15 | AT3G56840 | FAD-dependent oxidoreductase family protein | 0.63 | 0.31 | -0.34 | |||
16 | AT2G18500 | ovate family protein 7 | ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 7, ovate family protein 7 |
-0.63 | 0.3 | -0.31 | ||
17 | AT4G01410 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
0.63 | 0.32 | -0.32 | |||
18 | AT2G05830 | NagB/RpiA/CoA transferase-like superfamily protein | 0.63 | 0.32 | -0.34 | |||
19 | AT5G56250 | hapless 8 | HAPLESS 8 | 0.63 | 0.29 | -0.31 | ||
20 | AT5G08470 | peroxisome 1 | EMBRYO DEFECTIVE 2817, peroxisome 1 |
0.63 | 0.33 | -0.32 | ||
21 | AT3G17790 | purple acid phosphatase 17 | ATACP5, ATPAP17, purple acid phosphatase 17 |
0.63 | 0.33 | -0.3 | ||
22 | AT4G00050 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
unfertilized embryo sac 10 | 0.62 | 0.31 | -0.34 | ||
23 | AT2G46420 | Plant protein 1589 of unknown function | 0.62 | 0.34 | -0.33 | |||
24 | AT4G04040 | Phosphofructokinase family protein | maternal effect embryo arrest 51 | 0.62 | 0.3 | -0.32 | ||
25 | AT4G38250 | Transmembrane amino acid transporter family protein | 0.62 | 0.3 | -0.3 | |||
26 | AT1G58420 | Uncharacterised conserved protein UCP031279 | -0.61 | 0.31 | -0.32 | |||
27 | AT2G21100 | Disease resistance-responsive (dirigent-like protein) family protein |
-0.61 | 0.31 | -0.31 | |||
28 | AT4G37260 | myb domain protein 73 | ATMYB73, myb domain protein 73 | -0.61 | 0.32 | -0.31 | ||
29 | AT1G07350 | RNA-binding (RRM/RBD/RNP motifs) family protein | serine/arginine rich-like protein 45a |
0.61 | 0.29 | -0.32 | ||
30 | AT1G49840 | Protein of unknown function (DUF620) | -0.61 | 0.34 | -0.3 | |||
31 | AT2G18790 | phytochrome B | HY3, OUT OF PHASE 1, phytochrome B | 0.6 | 0.3 | -0.32 | ||
32 | AT5G66210 | calcium-dependent protein kinase 28 | calcium-dependent protein kinase 28 |
-0.6 | 0.32 | -0.31 | ||
33 | AT2G20790 | clathrin adaptor complexes medium subunit family protein | 0.6 | 0.31 | -0.3 | |||
34 | AT5G64570 | beta-D-xylosidase 4 | ARABIDOPSIS THALIANA BETA-D-XYLOSIDASE 4, beta-D-xylosidase 4 |
0.6 | 0.28 | -0.34 | ||
35 | AT5G67250 | SKP1/ASK1-interacting protein 2 | SKP1/ASK1-interacting protein 2, VIER F-BOX PROTEINE 4 |
-0.6 | 0.34 | -0.31 | ||
36 | AT2G23060 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | -0.6 | 0.33 | -0.31 | |||
37 | AT4G33030 | sulfoquinovosyldiacylglycerol 1 | sulfoquinovosyldiacylglycerol 1 | 0.6 | 0.3 | -0.32 | ||
38 | AT2G42490 | Copper amine oxidase family protein | 0.6 | 0.31 | -0.33 | |||
39 | AT1G53650 | CTC-interacting domain 8 | CTC-interacting domain 8 | 0.59 | 0.3 | -0.33 | ||
40 | AT3G02870 | Inositol monophosphatase family protein | VTC4 | 0.59 | 0.31 | -0.31 | ||
41 | AT2G40140 | zinc finger (CCCH-type) family protein | ATSZF2, CZF1, (SALT-INDUCIBLE ZINC FINGER 2, ZFAR1 |
-0.59 | 0.33 | -0.31 | ||
42 | AT5G46710 | PLATZ transcription factor family protein | -0.59 | 0.32 | -0.33 | |||
43 | AT3G51610 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 53 Blast hits to 53 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
NO PRIMEXINE AND PLASMA MEMBRANE UNDULATION |
0.59 | 0.32 | -0.31 | ||
44 | AT4G25470 | C-repeat/DRE binding factor 2 | ATCBF2, C-repeat/DRE binding factor 2, DRE/CRT-BINDING PROTEIN 1C, FREEZING TOLERANCE QTL 4 |
-0.59 | 0.32 | -0.3 | ||
45 | AT5G60070 | ankyrin repeat family protein | 0.59 | 0.31 | -0.33 | |||
46 | AT2G41010 | calmodulin (CAM)-binding protein of 25 kDa | calmodulin (CAM)-binding protein of 25 kDa, calmodulin (CAM)-binding protein of 25 kDa |
-0.58 | 0.33 | -0.3 | ||
47 | AT2G25160 | cytochrome P450, family 82, subfamily F, polypeptide 1 | cytochrome P450, family 82, subfamily F, polypeptide 1 |
-0.58 | 0.29 | -0.33 | ||
48 | AT2G13560 | NAD-dependent malic enzyme 1 | NAD-dependent malic enzyme 1 | 0.58 | 0.3 | -0.33 | ||
49 | AT5G56980 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.58 | 0.31 | -0.31 | |||
50 | AT1G22140 | unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
0.58 | 0.3 | -0.32 | |||
51 | AT2G35795 | Chaperone DnaJ-domain superfamily protein | 0.58 | 0.32 | -0.33 | |||
52 | AT2G30660 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
0.58 | 0.31 | -0.31 | |||
53 | AT4G30900 | DNAse I-like superfamily protein | 0.58 | 0.31 | -0.31 | |||
54 | AT1G75800 | Pathogenesis-related thaumatin superfamily protein | -0.58 | 0.33 | -0.29 | |||
55 | AT4G24570 | dicarboxylate carrier 2 | dicarboxylate carrier 2 | -0.58 | 0.32 | -0.31 | ||
56 | AT1G11200 | Protein of unknown function (DUF300) | 0.58 | 0.3 | -0.32 | |||
57 | AT1G36550 | transposable element gene | 0.58 | 0.31 | -0.31 | |||
58 | AT3G49530 | NAC domain containing protein 62 | NAC domain containing protein 62, NAC domain containing protein 62, NTM1 (NAC WITH TRANSMEMBRANE MOTIF 1)-LIKE 6 |
-0.58 | 0.32 | -0.33 | ||
59 | AT1G18740 | Protein of unknown function (DUF793) | -0.58 | 0.33 | -0.31 | |||
60 | AT1G61340 | F-box family protein | -0.57 | 0.32 | -0.32 | |||
61 | AT4G01575 | serine protease inhibitor, Kazal-type family protein | -0.57 | 0.28 | -0.32 | |||
62 | AT5G01950 | Leucine-rich repeat protein kinase family protein | -0.57 | 0.3 | -0.29 | |||
63 | AT5G08750 | RING/FYVE/PHD zinc finger superfamily protein | 0.57 | 0.32 | -0.3 | |||
64 | AT1G23530 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70470.1); Has 38 Blast hits to 38 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.57 | 0.32 | -0.31 | |||
65 | AT5G42680 | Protein of unknown function, DUF617 | 0.57 | 0.33 | -0.33 | |||
66 | AT2G39170 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (InterPro:IPR019320); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.57 | 0.31 | -0.32 | |||
67 | AT4G33160 | F-box family protein | -0.56 | 0.31 | -0.32 | |||
68 | AT4G32020 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25250.1); Has 65 Blast hits to 65 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.31 | -0.3 | |||
69 | AT1G14740 | Protein of unknown function (DUF1423) | -0.56 | 0.33 | -0.34 | |||
70 | AT5G39790 | 5'-AMP-activated protein kinase-related | 0.56 | 0.28 | -0.3 | |||
71 | AT5G13580 | ABC-2 type transporter family protein | ATP-binding cassette G6 | -0.56 | 0.33 | -0.35 | ||
72 | AT1G16560 | Per1-like family protein | 0.56 | 0.31 | -0.31 | |||
73 | AT4G29780 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12010.1); Has 945 Blast hits to 944 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 519; Fungi - 43; Plants - 365; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). |
-0.56 | 0.3 | -0.33 | |||
74 | AT1G12610 | Integrase-type DNA-binding superfamily protein | DWARF AND DELAYED FLOWERING 1 | -0.56 | 0.33 | -0.3 | ||
75 | AT2G48130 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.55 | 0.33 | -0.33 | |||
76 | AT1G61850 | phospholipases;galactolipases | 0.55 | 0.31 | -0.31 | |||
77 | AT3G14220 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.55 | 0.32 | -0.31 | |||
78 | AT2G38440 | SCAR homolog 2 | SCAR HOMOLOG 2, DIS3, IRREGULAR TRICHOME BRANCH1, SCAR homolog 2, WAVE4 |
0.55 | 0.33 | -0.32 | ||
79 | AT4G01120 | G-box binding factor 2 | BASIC REGION/LEUCINE ZIPPER MOTIF 5, G-box binding factor 2 |
-0.55 | 0.31 | -0.31 | ||
80 | AT4G12720 | MutT/nudix family protein | Arabidopsis thaliana Nudix hydrolase homolog 7, GROWTH FACTOR GENE 1, NUDT7 |
-0.55 | 0.32 | -0.32 | ||
81 | AT4G05320 | polyubiquitin 10 | polyubiquitin 10 | 0.55 | 0.31 | -0.31 | ||
82 | AT5G03555 | permease, cytosine/purines, uracil, thiamine, allantoin family protein |
0.55 | 0.33 | -0.32 | |||
83 | AT1G14920 | GRAS family transcription factor family protein | GIBBERELLIC ACID INSENSITIVE, RESTORATION ON GROWTH ON AMMONIA 2 |
0.55 | 0.3 | -0.31 | ||
84 | AT5G64310 | arabinogalactan protein 1 | arabinogalactan protein 1, ATAGP1 | -0.55 | 0.32 | -0.29 | ||
85 | AT3G24620 | RHO guanyl-nucleotide exchange factor 8 | ATROPGEF8, RHO guanyl-nucleotide exchange factor 8 |
0.54 | 0.3 | -0.32 | ||
86 | AT2G24600 | Ankyrin repeat family protein | -0.54 | 0.34 | -0.31 | |||
87 | AT5G05700 | arginine-tRNA protein transferase 1 | ATATE1, arginine-tRNA protein transferase 1, DELAYED LEAF SENESCENCE 1 |
0.54 | 0.32 | -0.32 | ||
88 | AT4G36610 | alpha/beta-Hydrolases superfamily protein | -0.54 | 0.3 | -0.31 | |||
89 | AT5G28220 | Protein prenylyltransferase superfamily protein | 0.54 | 0.31 | -0.32 | |||
90 | AT4G27652 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27657.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.54 | 0.31 | -0.32 | |||
91 | AT3G44370 | Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain |
0.54 | 0.32 | -0.3 | |||
92 | AT3G30820 | Arabidopsis retrotransposon ORF-1 protein | -0.54 | 0.31 | -0.31 | |||
93 | AT1G10560 | plant U-box 18 | ARABIDOPSIS THALIANA PLANT U-BOX 18, plant U-box 18 |
-0.53 | 0.32 | -0.32 | ||
94 | AT1G73540 | nudix hydrolase homolog 21 | nudix hydrolase homolog 21, nudix hydrolase homolog 21 |
-0.53 | 0.34 | -0.33 | ||
95 | AT3G57930 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 1519 Blast hits to 1241 proteins in 182 species: Archae - 0; Bacteria - 60; Metazoa - 576; Fungi - 133; Plants - 127; Viruses - 30; Other Eukaryotes - 593 (source: NCBI BLink). |
-0.53 | 0.31 | -0.32 | |||
96 | AT1G79320 | metacaspase 6 | metacaspase 6, metacaspase 2c, metacaspase 6, metacaspase 2c |
-0.53 | 0.32 | -0.3 | ||
97 | AT5G11710 | ENTH/VHS family protein | 0.53 | 0.31 | -0.29 | |||
98 | AT1G49800 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, stamen; EXPRESSED DURING: 4 anthesis; Has 12 Blast hits to 12 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.31 | -0.3 | |||
99 | AT3G46600 | GRAS family transcription factor | -0.53 | 0.3 | -0.35 | |||
100 | AT5G59450 | GRAS family transcription factor | -0.53 | 0.28 | -0.32 | |||
101 | AT3G16320 | Tetratricopeptide repeat (TPR)-like superfamily protein | CDC27a | -0.52 | 0.3 | -0.32 | ||
102 | AT3G02840 | ARM repeat superfamily protein | -0.52 | 0.31 | -0.33 | |||
103 | AT1G03700 | Uncharacterised protein family (UPF0497) | -0.52 | 0.28 | -0.33 | |||
104 | AT3G09220 | laccase 7 | laccase 7 | -0.52 | 0.29 | -0.32 | ||
105 | AT4G33330 | plant glycogenin-like starch initiation protein 3 | glucuronic acid substitution of xylan 2, plant glycogenin-like starch initiation protein 3 |
-0.52 | 0.33 | -0.33 | ||
106 | AT4G17280 | Auxin-responsive family protein | -0.52 | 0.32 | -0.31 | |||
107 | AT1G60200 | splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein |
-0.52 | 0.32 | -0.31 | |||
108 | AT2G33830 | Dormancy/auxin associated family protein | -0.51 | 0.32 | -0.34 | |||
109 | AT5G24590 | TCV-interacting protein | Arabidopsis NAC domain containing protein 91, TCV-interacting protein |
-0.51 | 0.32 | -0.33 | ||
110 | AT3G46620 | zinc finger (C3HC4-type RING finger) family protein | -0.51 | 0.33 | -0.3 | |||
111 | AT3G44350 | NAC domain containing protein 61 | NAC domain containing protein 61, NAC domain containing protein 61 |
-0.51 | 0.34 | -0.31 | ||
112 | AT5G62630 | hipl2 protein precursor | hipl2 protein precursor | -0.51 | 0.32 | -0.32 | ||
113 | AT4G28130 | diacylglycerol kinase 6 | ATDGK6, diacylglycerol kinase 6 | -0.51 | 0.33 | -0.35 | ||
114 | AT5G45340 | cytochrome P450, family 707, subfamily A, polypeptide 3 | cytochrome P450, family 707, subfamily A, polypeptide 3 |
-0.51 | 0.31 | -0.31 | ||
115 | AT1G73410 | myb domain protein 54 | ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 54, myb domain protein 54 |
-0.5 | 0.3 | -0.31 | ||
116 | AT4G27654 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.5 | 0.29 | -0.31 | |||
117 | AT2G26190 | calmodulin-binding family protein | -0.5 | 0.32 | -0.32 | |||
118 | AT5G03795 | Exostosin family protein | -0.5 | 0.32 | -0.31 | |||
119 | AT2G13840 | Polymerase/histidinol phosphatase-like | -0.5 | 0.3 | -0.32 | |||
120 | AT5G26920 | Cam-binding protein 60-like G | Cam-binding protein 60-like G | -0.5 | 0.29 | -0.3 | ||
121 | AT5G49310 | importin alpha isoform 5 | importin alpha isoform 5 | -0.5 | 0.33 | -0.34 | ||
122 | AT4G19130 | Replication factor-A protein 1-related | -0.5 | 0.33 | -0.29 | |||
123 | AT3G15530 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.5 | 0.33 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
124 | C0110 | Guanosine | - | Guanosine | guanosine nucleotides degradation I, guanine and guanosine salvage II, guanosine nucleotides degradation II, guanine and guanosine salvage III |
0.77 | 0.44 | -0.43 | ||
125 | C0238 | Sitosterol 3-O-β-D-glucoside | - | 3-O-β-D-Glucosyl-β-sitosterol | sphingolipid biosynthesis | -0.58 | 0.34 | -0.34 | ||
126 | C0064 | Campesterol 3-O-β-D-glucoside | - | - | - | -0.57 | 0.31 | -0.36 | ||
127 | C0100 | Glucose-6-phosphate | D-(+)-Glucose-6-phosphate | D-Glucose-6-phosphate | starch biosyntehsis | -0.55 | 0.33 | -0.3 |