AT4G02540 : -
Query Information
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AGICode AT4G02540
Description Cysteine/Histidine-rich C1 domain family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G02540 Cysteine/Histidine-rich C1 domain family protein 1 0.33 -0.32
2 AT4G05050 ubiquitin 11 ubiquitin 11 0.91 0.3 -0.3
3 AT4G02450 HSP20-like chaperones superfamily protein 0.88 0.3 -0.31
4 AT4G03050 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 AOP3 -0.84 0.32 -0.32
5 AT4G08110 transposable element gene 0.8 0.32 -0.32
6 AT4G05040 ankyrin repeat family protein 0.79 0.3 -0.31
7 AT4G05460 RNI-like superfamily protein 0.79 0.32 -0.31
8 AT4G01860 Transducin family protein / WD-40 repeat family protein 0.77 0.32 -0.31
9 AT4G05320 polyubiquitin 10 polyubiquitin 10 0.75 0.3 -0.33
10 AT4G01130 GDSL-like Lipase/Acylhydrolase superfamily protein 0.73 0.32 -0.32
11 AT4G05520 EPS15 homology domain 2 EPS15 homology domain 2, EPS15
homology domain 2		 0.71 0.33 -0.31
12 AT4G03820 Protein of unknown function (DUF3537) 0.7 0.3 -0.31
13 AT4G08280 Thioredoxin superfamily protein 0.67 0.32 -0.3
14 AT4G02070 MUTS homolog 6 ARABIDOPSIS THALIANA MUTS HOMOLOG
6, MUTS homolog 6, MUTS HOMOLOG
6-1		 0.66 0.34 -0.33
15 AT1G66540 Cytochrome P450 superfamily protein 0.66 0.31 -0.31
16 AT4G12740 HhH-GPD base excision DNA repair family protein 0.63 0.31 -0.32
17 AT4G08960 phosphotyrosyl phosphatase activator (PTPA) family protein -0.63 0.3 -0.3
18 AT3G05170 Phosphoglycerate mutase family protein 0.63 0.34 -0.3
19 AT4G00520 Acyl-CoA thioesterase family protein 0.62 0.3 -0.32
20 AT5G39990 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.62 0.33 -0.3
21 AT4G00440 Protein of unknown function (DUF3741) 0.62 0.3 -0.31
22 AT4G00110 UDP-D-glucuronate 4-epimerase 3 UDP-D-glucuronate 4-epimerase 3 0.61 0.31 -0.32
23 AT4G00900 ER-type Ca2+-ATPase 2 ARABIDOPSIS THALIANA ER-TYPE
CA2+-ATPASE 2, ER-type Ca2+-ATPase
2		 0.6 0.32 -0.3
24 AT4G13630 Protein of unknown function, DUF593 0.6 0.33 -0.32
25 AT1G32770 NAC domain containing protein 12 NAC domain containing protein 12,
NAC domain containing protein 12,
NAC SECONDARY WALL THICKENING
PROMOTING 3, SECONDARY
WALL-ASSOCIATED NAC DOMAIN 1		 0.6 0.33 -0.32
26 AT1G58150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: in 9 processes; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.31 -0.31
27 AT4G04220 receptor like protein 46 receptor like protein 46, receptor
like protein 46		 0.6 0.33 -0.3
28 AT4G05450 mitochondrial ferredoxin 1 ARABIDOPSIS MITOCHONDRIAL
FERREDOXIN 1, mitochondrial
ferredoxin 1		 0.6 0.32 -0.31
29 AT5G37830 oxoprolinase 1 oxoprolinase 1 0.59 0.31 -0.29
30 AT4G00335 RING-H2 finger B1A RING-H2 finger B1A -0.59 0.3 -0.3
31 AT3G07790 DGCR14-related -0.59 0.32 -0.32
32 AT4G02460 DNA mismatch repair protein, putative POSTMEIOTIC SEGREGATION 1 -0.58 0.33 -0.32
33 AT4G25100 Fe superoxide dismutase 1 ARABIDOPSIS FE SUPEROXIDE
DISMUTASE 1, Fe superoxide
dismutase 1		 0.58 0.32 -0.31
34 AT5G15980 Pentatricopeptide repeat (PPR) superfamily protein 0.58 0.33 -0.32
35 AT5G43500 actin-related protein 9 actin-related protein 9,
actin-related protein 9		 -0.58 0.29 -0.32
36 AT4G19240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43280.1); Has 19 Blast hits
to 17 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.31 -0.3
37 AT5G07770 Actin-binding FH2 protein 0.56 0.32 -0.3
38 AT1G11960 ERD (early-responsive to dehydration stress) family protein -0.56 0.32 -0.33
39 AT5G35730 EXS (ERD1/XPR1/SYG1) family protein 0.55 0.32 -0.31
40 AT4G01910 Cysteine/Histidine-rich C1 domain family protein 0.55 0.33 -0.34
41 AT4G27050 F-box/RNI-like superfamily protein -0.55 0.31 -0.33
42 AT4G07400 VIER F-box proteine 3 VIER F-box proteine 3 -0.55 0.31 -0.31
43 AT1G48330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits
to 40 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.55 0.29 -0.3
44 AT4G04770 ATP binding cassette protein 1 ATP binding cassette protein 1,
ATP-binding cassette I8, ATP
binding cassette protein 1,
ARABIDOPSIS THALIANA NUCLEOSOME
ASSEMBLY PROTEIN 1, LONG AFTER FR		 0.55 0.31 -0.3
45 AT4G21300 Tetratricopeptide repeat (TPR)-like superfamily protein 0.53 0.31 -0.32
46 AT4G22280 F-box/RNI-like superfamily protein -0.52 0.33 -0.31
47 AT5G03470 Protein phosphatase 2A regulatory B subunit family protein ATB' ALPHA -0.52 0.31 -0.31
48 AT4G00050 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 unfertilized embryo sac 10 0.52 0.32 -0.29
49 AT3G19240 Vacuolar import/degradation, Vid27-related protein -0.52 0.31 -0.31
50 AT1G52770 Phototropic-responsive NPH3 family protein -0.51 0.31 -0.33
51 AT2G24190 NAD(P)-binding Rossmann-fold superfamily protein short-chain
dehydrogenase/reductase 2		 0.51 0.3 -0.32
52 AT5G28030 L-cysteine desulfhydrase 1 L-cysteine desulfhydrase 1 -0.51 0.33 -0.32
53 AT4G13460 SU(VAR)3-9 homolog 9 SETDOMAIN GROUP 22, SET22,
SU(VAR)3-9 homolog 9		 0.5 0.3 -0.34
54 AT1G32375 F-box/RNI-like/FBD-like domains-containing protein 0.5 0.31 -0.31
55 AT5G46550 DNA-binding bromodomain-containing protein -0.5 0.32 -0.3
56 AT2G05350 unknown protein; Has 22 Blast hits to 16 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.5 0.31 -0.31
57 AT1G51460 ABC-2 type transporter family protein ATP-binding cassette G13 0.5 0.33 -0.33
58 AT4G00980 zinc knuckle (CCHC-type) family protein 0.49 0.33 -0.3
59 AT5G41170 Pentatricopeptide repeat (PPR-like) superfamily protein 0.49 0.33 -0.3
60 AT5G51270 U-box domain-containing protein kinase family protein 0.49 0.31 -0.32
61 AT2G36885 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 172 Blast hits to
172 proteins in 58 species: Archae - 0; Bacteria - 116;
Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 24 (source: NCBI BLink).		 0.49 0.31 -0.31
62 AT4G29800 PATATIN-like protein 8 PLA IVD, PATATIN-like protein 8 0.49 0.31 -0.33
63 AT4G03940 unknown protein; Has 8 Blast hits to 8 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink).		 -0.48 0.32 -0.3
64 AT4G32230 unknown protein; Has 14 Blast hits to 14 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.48 0.31 -0.3
65 AT3G07650 CONSTANS-like 9 CONSTANS-like 9 -0.47 0.3 -0.29
66 ATMG00130 hypothetical protein ORF121A -0.47 0.34 -0.29
67 AT4G25620 hydroxyproline-rich glycoprotein family protein -0.47 0.33 -0.31
68 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.46 0.3 -0.3
69 AT5G45220 Disease resistance protein (TIR-NBS-LRR class) family 0.46 0.31 -0.32
70 AT1G21140 Vacuolar iron transporter (VIT) family protein 0.46 0.34 -0.33
71 AT1G55040 zinc finger (Ran-binding) family protein 0.46 0.33 -0.34
72 AT3G42360 transposable element gene -0.44 0.31 -0.31
73 AT4G27150 seed storage albumin 2 AT2S2, seed storage albumin 2 -0.43 0.31 -0.32
74 AT1G74150 Galactose oxidase/kelch repeat superfamily protein -0.43 0.33 -0.3
75 AT4G22600 unknown protein; Has 26 Blast hits to 26 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.39 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
76 C0244 Sucrose D-Sucrose Sucrose stachyose biosynthesis,
fructan degradation,
stachyose degradation,
galactose degradation III,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
sucrose degradation III,
UDP-glucose biosynthesis (from sucrose),
ajugose biosynthesis II (galactinol-independent),
sucrose biosynthesis I 		0.54 0.32 -0.31 C0244