AT4G01860 : -
Query Information
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AGICode AT4G01860
Description Transducin family protein / WD-40 repeat family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G01860 Transducin family protein / WD-40 repeat family protein 1 0.29 -0.29
2 AT4G05040 ankyrin repeat family protein 0.8 0.3 -0.34
3 AT4G02540 Cysteine/Histidine-rich C1 domain family protein 0.77 0.3 -0.28
4 AT4G02450 HSP20-like chaperones superfamily protein 0.76 0.33 -0.32
5 AT4G03050 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 AOP3 -0.71 0.32 -0.31
6 AT4G12740 HhH-GPD base excision DNA repair family protein 0.69 0.32 -0.34
7 AT4G05520 EPS15 homology domain 2 EPS15 homology domain 2, EPS15
homology domain 2		 0.67 0.33 -0.34
8 AT4G02150 ARM repeat superfamily protein IMPORTIN ALPHA 3, IMPORTIN ALPHA
ISOFORM 3, MODIFIER OF SNC1, 6		 0.67 0.34 -0.3
9 AT4G05050 ubiquitin 11 ubiquitin 11 0.66 0.33 -0.32
10 AT4G05450 mitochondrial ferredoxin 1 ARABIDOPSIS MITOCHONDRIAL
FERREDOXIN 1, mitochondrial
ferredoxin 1		 0.65 0.32 -0.33
11 AT4G02070 MUTS homolog 6 ARABIDOPSIS THALIANA MUTS HOMOLOG
6, MUTS homolog 6, MUTS HOMOLOG
6-1		 0.64 0.3 -0.31
12 AT4G01570 Tetratricopeptide repeat (TPR)-like superfamily protein 0.64 0.31 -0.31
13 AT4G00335 RING-H2 finger B1A RING-H2 finger B1A -0.62 0.31 -0.32
14 AT4G05460 RNI-like superfamily protein 0.62 0.33 -0.33
15 AT3G17770 Dihydroxyacetone kinase -0.62 0.33 -0.31
16 AT4G00980 zinc knuckle (CCHC-type) family protein 0.6 0.32 -0.32
17 AT4G10940 RING/U-box protein -0.59 0.31 -0.31
18 AT1G11960 ERD (early-responsive to dehydration stress) family protein -0.58 0.33 -0.29
19 AT4G08110 transposable element gene 0.58 0.32 -0.31
20 AT5G15980 Pentatricopeptide repeat (PPR) superfamily protein 0.58 0.33 -0.29
21 AT1G52590 Putative thiol-disulphide oxidoreductase DCC -0.57 0.32 -0.34
22 AT4G05320 polyubiquitin 10 polyubiquitin 10 0.56 0.3 -0.31
23 AT5G35450 Disease resistance protein (CC-NBS-LRR class) family 0.55 0.32 -0.33
24 AT2G22520 unknown protein; Has 186 Blast hits to 37 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4;
Plants - 17; Viruses - 0; Other Eukaryotes - 165 (source:
NCBI BLink).		 0.54 0.32 -0.32
25 AT5G57710 Double Clp-N motif-containing P-loop nucleoside
triphosphate hydrolases superfamily protein		 -0.54 0.31 -0.31
26 AT2G05350 unknown protein; Has 22 Blast hits to 16 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.52 0.29 -0.32
27 AT4G04770 ATP binding cassette protein 1 ATP binding cassette protein 1,
ATP-binding cassette I8, ATP
binding cassette protein 1,
ARABIDOPSIS THALIANA NUCLEOSOME
ASSEMBLY PROTEIN 1, LONG AFTER FR		 0.52 0.31 -0.31
28 AT4G01910 Cysteine/Histidine-rich C1 domain family protein 0.51 0.29 -0.31
29 AT2G06200 growth-regulating factor 6 growth-regulating factor 6,
growth-regulating factor 6		 0.51 0.31 -0.32
30 AT5G45910 GDSL-like Lipase/Acylhydrolase superfamily protein -0.51 0.31 -0.32
31 AT4G03500 Ankyrin repeat family protein 0.51 0.31 -0.3
32 AT5G18870 Inosine-uridine preferring nucleoside hydrolase family
protein		 nucleoside hydrolase 5 -0.5 0.31 -0.32
33 AT3G05170 Phosphoglycerate mutase family protein 0.5 0.32 -0.31
34 AT5G59200 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 80 0.5 0.32 -0.32
35 AT1G30810 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 -0.5 0.33 -0.3
36 AT3G59030 MATE efflux family protein A. THALIANA TRANSPARENT TESTA,
TRANSPARENT TESTA 12		 0.5 0.33 -0.3
37 AT2G36885 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 172 Blast hits to
172 proteins in 58 species: Archae - 0; Bacteria - 116;
Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 24 (source: NCBI BLink).		 0.49 0.32 -0.34
38 AT5G07770 Actin-binding FH2 protein 0.47 0.34 -0.31
39 AT3G07790 DGCR14-related -0.47 0.31 -0.33
40 AT5G41170 Pentatricopeptide repeat (PPR-like) superfamily protein 0.46 0.32 -0.32
41 AT3G45270 transposable element gene 0.46 0.33 -0.32
42 AT1G33520 D111/G-patch domain-containing protein modifier of snc1, 2 -0.44 0.34 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
43 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		-0.62 0.41 -0.43 C0011
44 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		-0.58 0.46 -0.44 C0186