AT4G00780 : -
Query Information
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AGICode AT4G00780
Description TRAF-like family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G00780 TRAF-like family protein 1 0.31 -0.32
2 AT3G61210 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.76 0.33 -0.33
3 AT5G14570 high affinity nitrate transporter 2.7 high affinity nitrate transporter
2.7, high affinity nitrate
transporter 2.7		 -0.75 0.31 -0.33
4 AT3G07610 Transcription factor jumonji (jmjC) domain-containing
protein		 increase in bonsai methylation 1 -0.75 0.32 -0.3
5 AT1G23130 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.75 0.33 -0.31
6 AT1G67860 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67865.1); Has 13 Blast hits
to 13 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.32 -0.31
7 AT1G10770 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.73 0.33 -0.32
8 AT5G57140 purple acid phosphatase 28 PURPLE ACID PHOSPHATASE 28, purple
acid phosphatase 28		 0.72 0.29 -0.33
9 AT1G75860 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G20100.1); Has 258 Blast hits
to 235 proteins in 58 species: Archae - 0; Bacteria - 4;
Metazoa - 59; Fungi - 16; Plants - 90; Viruses - 0; Other
Eukaryotes - 89 (source: NCBI BLink).		 -0.71 0.31 -0.33
10 AT1G74870 RING/U-box superfamily protein -0.7 0.32 -0.33
11 AT1G67870 glycine-rich protein 0.69 0.31 -0.31
12 AT3G22840 Chlorophyll A-B binding family protein ELIP, EARLY LIGHT-INDUCABLE
PROTEIN		 -0.69 0.32 -0.3
13 AT1G11390 Protein kinase superfamily protein -0.69 0.31 -0.32
14 AT5G10320 unknown protein; Has 54 Blast hits to 53 proteins in 19
species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0;
Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.29 -0.33
15 AT1G74700 tRNAse Z1 NUZ, tRNAse Z1 -0.68 0.33 -0.31
16 AT5G05250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.67 0.33 -0.3
17 AT5G43450 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.67 0.32 -0.33
18 AT4G17550 Major facilitator superfamily protein glycerol-3-phosphate permease 4,
glycerol-3-phosphate permease 4		 -0.67 0.31 -0.3
19 AT1G47400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47395.1); Has 11 Blast hits
to 11 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.31 -0.31
20 AT1G23020 ferric reduction oxidase 3 FERRIC REDUCTION OXIDASE 3, ferric
reduction oxidase 3		 0.66 0.3 -0.32
21 AT5G47430 DWNN domain, a CCHC-type zinc finger -0.66 0.32 -0.32
22 AT1G59580 mitogen-activated protein kinase homolog 2 mitogen-activated protein kinase
homolog 2, mitogen-activated
protein kinase homolog 2		 0.66 0.32 -0.29
23 AT1G43840 transposable element gene -0.65 0.32 -0.33
24 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.3 -0.31
25 AT2G42040 CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has
219 Blast hits to 219 proteins in 19 species: Archae - 0;
Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.64 0.31 -0.31
26 AT5G52640 heat shock protein 90.1 ATHS83, HEAT SHOCK PROTEIN 90-1,
heat shock protein 90.1, HEAT
SHOCK PROTEIN 81-1, HSP81.1, HEAT
SHOCK PROTEIN 83, heat shock
protein 90.1		 -0.64 0.32 -0.31
27 AT3G57050 cystathionine beta-lyase cystathionine beta-lyase 0.64 0.34 -0.32
28 AT1G53910 related to AP2 12 related to AP2 12 -0.64 0.31 -0.32
29 AT5G63370 Protein kinase superfamily protein -0.63 0.34 -0.31
30 AT4G14690 Chlorophyll A-B binding family protein EARLY LIGHT-INDUCIBLE PROTEIN 2 -0.63 0.3 -0.32
31 AT2G25620 DNA-binding protein phosphatase 1 DNA-binding protein phosphatase 1,
DNA-binding protein phosphatase 1		 -0.63 0.31 -0.3
32 AT3G60910 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.63 0.33 -0.31
33 AT3G62240 RING/U-box superfamily protein -0.63 0.31 -0.31
34 AT5G01600 ferretin 1 ARABIDOPSIS THALIANA FERRETIN 1,
ferretin 1		 -0.63 0.33 -0.32
35 AT5G54530 Protein of unknown function, DUF538 0.63 0.3 -0.3
36 AT4G18570 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.32 -0.3
37 AT2G36350 Protein kinase superfamily protein -0.62 0.33 -0.31
38 AT2G35750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1 Blast hits to 1
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.62 0.31 -0.3
39 AT1G48160 signal recognition particle 19 kDa protein, putative /
SRP19, putative		 0.62 0.31 -0.32
40 AT1G75130 cytochrome P450, family 721, subfamily A, polypeptide 1 cytochrome P450, family 721,
subfamily A, polypeptide 1		 0.62 0.31 -0.3
41 AT5G60790 ABC transporter family protein ATP-binding cassette F1,
ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 1, GENERAL
CONTROL NON-REPRESSIBLE 1		 -0.62 0.31 -0.31
42 AT1G20960 U5 small nuclear ribonucleoprotein helicase, putative embryo defective 1507 -0.62 0.3 -0.33
43 AT5G28290 NIMA-related kinase 3 NIMA-related kinase 3,
NIMA-related kinase 3		 -0.61 0.34 -0.3
44 AT3G19400 Cysteine proteinases superfamily protein 0.61 0.3 -0.32
45 AT5G25110 CBL-interacting protein kinase 25 CBL-interacting protein kinase 25,
SNF1-RELATED PROTEIN KINASE 3.25		 -0.61 0.31 -0.33
46 AT5G13930 Chalcone and stilbene synthase family protein ATCHS, CHALCONE SYNTHASE,
TRANSPARENT TESTA 4		 -0.61 0.33 -0.31
47 AT2G36480 ENTH/VHS family protein -0.61 0.34 -0.3
48 AT5G02560 histone H2A 12 histone H2A 12 0.61 0.31 -0.32
49 AT3G05510 Phospholipid/glycerol acyltransferase family protein -0.61 0.33 -0.32
50 AT2G02280 phloem protein 2-B4 phloem protein 2-B4, phloem
protein 2-B4		 -0.61 0.31 -0.33
51 AT5G49500 Signal recognition particle, SRP54 subunit protein 0.6 0.32 -0.31
52 AT1G17665 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 11 growth stages; Has 149 Blast hits to
146 proteins in 39 species: Archae - 0; Bacteria - 4;
Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other
Eukaryotes - 89 (source: NCBI BLink).		 -0.6 0.32 -0.31
53 AT1G21440 Phosphoenolpyruvate carboxylase family protein 0.6 0.3 -0.32
54 AT1G48560 unknown protein; Has 75 Blast hits to 71 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 69; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.6 0.31 -0.31
55 AT1G12790 CONTAINS InterPro DOMAIN/s: RuvA domain 2-like
(InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.31 -0.28
56 AT1G09870 histidine acid phosphatase family protein -0.6 0.3 -0.31
57 AT4G21100 damaged DNA binding protein 1B damaged DNA binding protein 1B 0.59 0.32 -0.32
58 AT1G63900 E3 Ubiquitin ligase family protein DIAP1-like protein 1 -0.59 0.31 -0.35
59 AT1G05510 Protein of unknown function (DUF1264) -0.59 0.31 -0.33
60 AT5G58940 calmodulin-binding receptor-like cytoplasmic kinase 1 calmodulin-binding receptor-like
cytoplasmic kinase 1		 -0.59 0.32 -0.29
61 AT2G16890 UDP-Glycosyltransferase superfamily protein -0.59 0.31 -0.3
62 AT1G20100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G75860.1); Has 471 Blast hits
to 438 proteins in 92 species: Archae - 0; Bacteria - 14;
Metazoa - 217; Fungi - 43; Plants - 91; Viruses - 1; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.59 0.35 -0.3
63 AT1G55530 RING/U-box superfamily protein -0.59 0.31 -0.32
64 AT5G47060 Protein of unknown function (DUF581) -0.59 0.31 -0.33
65 AT1G25375 Metallo-hydrolase/oxidoreductase superfamily protein 0.59 0.31 -0.35
66 AT2G29050 RHOMBOID-like 1 RHOMBOID-like 1, RHOMBOID-like 1 0.59 0.32 -0.31
67 AT5G38750 asparaginyl-tRNA synthetase family -0.58 0.32 -0.32
68 AT3G22050 Domain of unknown function (DUF26) -0.58 0.32 -0.32
69 AT2G41900 CCCH-type zinc finger protein with ARM repeat domain OXIDATIVE STRESS 2 -0.58 0.31 -0.32
70 AT1G63500 Protein kinase protein with tetratricopeptide repeat domain -0.58 0.31 -0.32
71 AT3G09760 RING/U-box superfamily protein -0.58 0.31 -0.3
72 AT2G02410 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF901 (InterPro:IPR010298); Has 1151
Blast hits to 1151 proteins in 597 species: Archae - 0;
Bacteria - 1105; Metazoa - 0; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.57 0.3 -0.32
73 AT5G16920 Fasciclin-like arabinogalactan family protein -0.57 0.32 -0.31
74 AT3G45600 tetraspanin3 tetraspanin3 -0.57 0.32 -0.32
75 AT3G15220 Protein kinase superfamily protein 0.57 0.3 -0.33
76 AT3G06480 DEAD box RNA helicase family protein -0.57 0.31 -0.32
77 AT2G22000 elicitor peptide 6 precursor elicitor peptide 6 precursor 0.57 0.3 -0.32
78 AT5G01290 mRNA capping enzyme family protein -0.57 0.3 -0.31
79 AT4G11770 Galactose oxidase/kelch repeat superfamily protein 0.57 0.32 -0.3
80 AT2G25530 AFG1-like ATPase family protein -0.56 0.32 -0.32
81 AT3G16830 TOPLESS-related 2 TOPLESS-related 2 -0.56 0.32 -0.3
82 AT5G64880 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.56 0.3 -0.32
83 AT4G21700 Protein of unknown function (DUF2921) -0.56 0.33 -0.32
84 AT2G03270 DNA-binding protein, putative -0.56 0.32 -0.31
85 AT5G66820 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.56 0.3 -0.31
86 AT3G49920 voltage dependent anion channel 5 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 5, voltage
dependent anion channel 5		 0.56 0.31 -0.33
87 AT4G12990 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plant-type cell wall; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 4 Blast hits to 4
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.56 0.29 -0.31
88 AT5G56160 Sec14p-like phosphatidylinositol transfer family protein 0.55 0.31 -0.32
89 AT1G63670 Protein of unknown function (DUF3741) -0.55 0.31 -0.29
90 AT4G19690 iron-regulated transporter 1 ARABIDOPSIS IRON-REGULATED
TRANSPORTER 1, iron-regulated
transporter 1		 0.55 0.32 -0.31
91 AT3G49060 U-box domain-containing protein kinase family protein 0.55 0.31 -0.3
92 AT5G56610 Phosphotyrosine protein phosphatases superfamily protein 0.55 0.3 -0.32
93 AT5G42950 GYF domain-containing protein -0.55 0.3 -0.32
94 AT1G44935 transposable element gene sadhu non-coding retrotransposon
9-1		 -0.55 0.33 -0.31
95 AT1G63470 AT hook motif DNA-binding family protein -0.54 0.3 -0.29
96 AT1G21980 phosphatidylinositol-4-phosphate 5-kinase 1 phosphatidylinositol-4-phosphate
5-kinase 1, ATPIPK1,
phosphatidylinositol-4-phosphate
5-kinase 1		 -0.54 0.3 -0.31
97 AT5G67360 Subtilase family protein ARA12 -0.54 0.31 -0.33
98 AT2G41650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 3 Blast hits to 3 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.32 -0.3
99 AT1G07910 RNAligase AtRLG1, ARABIDOPSIS THALIANA RNA
LIGASE, RNAligase		 -0.54 0.32 -0.31
100 AT1G48390 RNI-like superfamily protein 0.54 0.32 -0.31
101 AT1G49040 stomatal cytokinesis defective / SCD1 protein (SCD1) STOMATAL CYTOKINESIS-DEFECTIVE 1 -0.54 0.32 -0.31
102 AT1G27900 RNA helicase family protein -0.54 0.33 -0.32
103 AT4G13960 F-box/RNI-like superfamily protein 0.53 0.32 -0.3
104 AT4G19670 RING/U-box superfamily protein 0.53 0.3 -0.34
105 AT3G23650 protein kinase-related 0.53 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
106 C0162 MST_1588.3 - - - 0.75 0.44 -0.47
107 C0145 Maltotetraose - Maltotetraose starch degradation II -0.74 0.45 -0.46 C0145
108 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		-0.73 0.48 -0.45 C0012
109 C0159 MST_1505.6 - - - 0.69 0.43 -0.46
110 C0001 α-Linolenic acid - (9,12,15)-Linolenate traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
poly-hydroxy fatty acids biosynthesis,
jasmonic acid biosynthesis 		-0.68 0.45 -0.44 C0001
111 C0213 PR_MST_2410.2 - - - -0.68 0.44 -0.48
112 C0198 Phosphatidylethanolamine-34:0 - - - -0.68 0.46 -0.46
113 C0215 PR_MST_2527.1 - - - -0.67 0.44 -0.46
114 C0214 PR_MST_2412.1 - - - -0.67 0.47 -0.39
115 C0086 Disinapylspermidine - - - -0.63 0.45 -0.42
116 C0022 1,4-Butanediamine - Putrescine spermine and spermidine degradation III,
putrescine degradation IV,
superpathway of polyamine biosynthesis,
putrescine biosynthesis II,
spermidine biosynthesis I,
putrescine biosynthesis I 		0.55 0.32 -0.3 C0022