AT4G00940 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G00940
Description Dof-type zinc finger DNA-binding family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G00940 Dof-type zinc finger DNA-binding family protein 1 0.33 -0.31
2 AT3G46860 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.73 0.31 -0.32
3 AT3G42690 transposable element gene -0.71 0.32 -0.3
4 AT5G16110 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast
hits to 133 proteins in 18 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.32 -0.29
5 AT2G01150 RING-H2 finger protein 2B RING-H2 finger protein 2B 0.7 0.3 -0.31
6 AT1G26820 ribonuclease 3 ribonuclease 3 0.69 0.32 -0.32
7 AT3G24280 small acidic protein 2 small acidic protein 2 -0.69 0.31 -0.29
8 AT1G23420 Plant-specific transcription factor YABBY family protein INNER NO OUTER -0.69 0.32 -0.31
9 AT1G28070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits
to 77 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.31 -0.31
10 AT3G05090 Transducin/WD40 repeat-like superfamily protein LATERAL ROOT STIMULATOR 1 -0.68 0.31 -0.3
11 AT1G18070 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.68 0.32 -0.32
12 AT3G48530 SNF1-related protein kinase regulatory subunit gamma 1 SNF1-related protein kinase
regulatory subunit gamma 1		 0.67 0.3 -0.3
13 AT1G68480 C2H2 and C2HC zinc fingers superfamily protein JAGGED -0.67 0.31 -0.32
14 AT4G15200 formin 3 formin 3, formin 3 -0.67 0.32 -0.31
15 AT5G56250 hapless 8 HAPLESS 8 -0.67 0.3 -0.3
16 AT5G14980 alpha/beta-Hydrolases superfamily protein -0.67 0.33 -0.3
17 AT2G23660 LOB domain-containing protein 10 LOB domain-containing protein 10 -0.66 0.3 -0.32
18 AT4G31210 DNA topoisomerase, type IA, core -0.66 0.31 -0.32
19 AT1G13070 putative cytochrome P450 cytochrome P450, family 71,
subfamily B, polypeptide 27		 -0.66 0.29 -0.31
20 AT4G13060 F-box associated ubiquitination effector family protein -0.66 0.31 -0.31
21 AT1G43140 Cullin family protein -0.66 0.32 -0.32
22 AT5G24230 Lipase class 3-related protein -0.66 0.32 -0.3
23 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 -0.65 0.31 -0.3
24 AT5G39620 RAB GTPase homolog G1 RAB GTPase homolog G1, RAB GTPase
homolog G1		 -0.65 0.33 -0.33
25 AT5G16300 Vps51/Vps67 family (components of vesicular transport)
protein		 -0.65 0.31 -0.33
26 AT1G51310 transferases;tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferases		 -0.65 0.32 -0.3
27 AT4G14240 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.65 0.32 -0.33
28 AT4G29580 Cytidine/deoxycytidylate deaminase family protein -0.65 0.33 -0.29
29 AT5G61800 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.32 -0.34
30 AT5G23520 smr (Small MutS Related) domain-containing protein -0.64 0.33 -0.34
31 AT5G39870 Protein of unknown function (DUF1216) -0.64 0.31 -0.32
32 AT5G35700 fimbrin-like protein 2 fimbrin-like protein 2, FIMBRIN5 -0.64 0.32 -0.3
33 AT4G35370 Transducin/WD40 repeat-like superfamily protein -0.64 0.33 -0.31
34 AT1G28170 sulphotransferase 7 sulphotransferase 7 -0.64 0.29 -0.32
35 AT5G19380 CRT (chloroquine-resistance transporter)-like transporter 1 CRT (chloroquine-resistance
transporter)-like transporter 1		 -0.64 0.33 -0.31
36 AT2G31740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.64 0.34 -0.31
37 AT1G55930 CBS domain-containing protein / transporter associated
domain-containing protein		 -0.64 0.3 -0.32
38 AT3G56610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: embryo, sperm cell,
sepal, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C
globular stage; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF784, Arabidopsis thaliana
(InterPro:IPR008502); Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.33 -0.32
39 AT5G45920 SGNH hydrolase-type esterase superfamily protein 0.64 0.3 -0.31
40 AT1G09810 evolutionarily conserved C-terminal region 11 evolutionarily conserved
C-terminal region 11		 -0.64 0.29 -0.33
41 AT1G60070 Adaptor protein complex AP-1, gamma subunit -0.63 0.33 -0.33
42 AT5G43610 sucrose-proton symporter 6 sucrose-proton symporter 6,
sucrose-proton symporter 6		 -0.63 0.31 -0.35
43 AT1G68980 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.3 -0.33
44 AT1G52360 Coatomer, beta' subunit -0.63 0.31 -0.31
45 AT2G05900 SET domain protein 11 SET domain protein 11, SU(VAR)3-9
HOMOLOG 10		 -0.63 0.31 -0.32
46 AT2G14020 transposable element gene -0.63 0.31 -0.32
47 AT3G59410 protein kinase family protein ARABIDOPSIS THALIANA GENERAL
CONTROL NON-REPRESSIBLE 2, GENERAL
CONTROL NON-REPRESSIBLE 2		 -0.63 0.31 -0.32
48 AT3G01380 transferases;sulfuric ester
hydrolases;catalytics;transferases		 -0.63 0.31 -0.33
49 AT1G68360 C2H2 and C2HC zinc fingers superfamily protein 0.63 0.31 -0.31
50 AT4G20235 cytochrome P450, family 71, subfamily A, polypeptide 28 cytochrome P450, family 71,
subfamily A, polypeptide 28		 -0.63 0.33 -0.31
51 AT1G42480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF3456
(InterPro:IPR021852); Has 177 Blast hits to 177 proteins in
59 species: Archae - 0; Bacteria - 0; Metazoa - 140; Fungi
- 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink).		 -0.62 0.34 -0.29
52 AT2G38650 galacturonosyltransferase 7 galacturonosyltransferase 7, LIKE
GLYCOSYL TRANSFERASE 7		 -0.62 0.32 -0.31
53 AT1G24060 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.33 -0.32
54 AT4G16447 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.62 0.33 -0.31
55 AT3G22360 alternative oxidase 1B alternative oxidase 1B 0.62 0.3 -0.29
56 AT3G59630 diphthamide synthesis DPH2 family protein -0.62 0.29 -0.3
57 ATMG00820 Reverse transcriptase (RNA-dependent DNA polymerase) ORF170 -0.62 0.33 -0.3
58 AT4G21140 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G05400.2); Has 41 Blast hits to 41
proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 -0.62 0.3 -0.3
59 AT3G19740 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.33 -0.32
60 AT4G39350 cellulose synthase A2 ATCESA2, ATH-A, cellulose synthase
A2		 -0.62 0.31 -0.31
61 AT3G42850 Mevalonate/galactokinase family protein -0.61 0.31 -0.32
62 AT1G62260 mitochondrial editing factor 9 mitochondrial editing factor 9 -0.61 0.32 -0.31
63 AT5G44850 Protein with RNI-like/FBD-like domains -0.61 0.32 -0.31
64 AT5G58580 TOXICOS EN LEVADURA 63 TOXICOS EN LEVADURA 63, TOXICOS EN
LEVADURA 63		 0.61 0.31 -0.31
65 AT5G15800 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 2, SEPALLATA1 -0.61 0.32 -0.32
66 AT5G27630 acyl-CoA binding protein 5 acyl-CoA binding protein 5 -0.61 0.31 -0.3
67 AT2G34400 Pentatricopeptide repeat (PPR-like) superfamily protein -0.61 0.3 -0.29
68 AT4G10820 F-box family protein -0.61 0.31 -0.32
69 AT4G11950 Protein of unknown function (DUF1191) -0.61 0.31 -0.35
70 AT5G46210 cullin4 ATCUL4, cullin4 -0.61 0.32 -0.3
71 AT4G05500 pseudogene, F-box protein family, AtFBL9/AtFBL23, contains
similarity to N7 protein GI:3273101 from (Medicago
truncatula); blastp match of 39% identity and 1.6e-34
P-value to GP|3273101|emb|CAA76808.1||Y17613 N7 protein
{Medicago truncatula}		 -0.61 0.31 -0.33
72 AT5G28590 DNA-binding family protein -0.61 0.32 -0.31
73 AT3G13070 CBS domain-containing protein / transporter associated
domain-containing protein		 -0.61 0.32 -0.33
74 AT4G12040 A20/AN1-like zinc finger family protein AtSAP7, stress-associated protein
7		 0.61 0.31 -0.3
75 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN -0.6 0.29 -0.31
76 AT5G50860 Protein kinase superfamily protein -0.6 0.33 -0.31
77 AT5G56980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 18 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G26130.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.6 0.35 -0.31
78 AT2G04030 Chaperone protein htpG family protein HEAT SHOCK PROTEIN 90.5, CR88,
EMBRYO DEFECTIVE 1956, HEAT SHOCK
PROTEIN 88.1, HEAT SHOCK PROTEIN
90.5		 -0.6 0.32 -0.34
79 AT5G48290 Heavy metal transport/detoxification superfamily protein -0.6 0.31 -0.3
80 AT4G16990 disease resistance protein (TIR-NBS class), putative RESISTANCE TO LEPTOSPHAERIA
MACULANS 3		 -0.6 0.33 -0.34
81 AT3G18480 CCAAT-displacement protein alternatively spliced product CCAAT-displacement protein
alternatively spliced product,
CCAAT-displacement protein
alternatively spliced product		 -0.6 0.29 -0.32
82 AT3G12840 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.6 0.31 -0.34
83 AT5G46140 Protein of unknown function (DUF295) -0.59 0.32 -0.3
84 AT4G23110 insulin-like growth factor binding -0.59 0.32 -0.34
85 AT1G74040 2-isopropylmalate synthase 1 2-isopropylmalate synthase 1,
SOPROPYLMALATE SYNTHASE 2, MAML-3		 -0.59 0.31 -0.33
86 AT2G37160 Transducin/WD40 repeat-like superfamily protein -0.59 0.31 -0.33
87 AT2G21060 glycine-rich protein 2B COLD SHOCK DOMAIN PROTEIN 4,
glycine-rich protein 2B,
glycine-rich protein 2B		 0.59 0.32 -0.31
88 AT1G28330 dormancy-associated protein-like 1 DORMANCY-ASSOCIATED PROTEIN 1,
dormancy-associated protein-like 1		 0.59 0.33 -0.31
89 AT1G68990 male gametophyte defective 3 male gametophyte defective 3 -0.59 0.32 -0.33
90 AT3G20440 Alpha amylase family protein BRANCHING ENZYME 1, EMBRYO
DEFECTIVE 2729		 -0.59 0.31 -0.3
91 AT4G11160 Translation initiation factor 2, small GTP-binding protein -0.59 0.31 -0.31
92 AT3G51210 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.31 -0.32
93 AT2G20880 Integrase-type DNA-binding superfamily protein AtERF53, ERF domain 53 -0.59 0.31 -0.32
94 AT5G02420 unknown protein; Has 90 Blast hits to 90 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.32 -0.3
95 AT1G32000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G38190.1); Has 14 Blast hits to 14
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.59 0.3 -0.33
96 AT2G05170 vacuolar protein sorting 11 vacuolar protein sorting 11,
vacuolar protein sorting 11		 -0.59 0.34 -0.31
97 AT1G02660 alpha/beta-Hydrolases superfamily protein 0.59 0.31 -0.31
98 AT3G62640 Protein of unknown function (DUF3511) -0.59 0.31 -0.32
99 AT1G07350 RNA-binding (RRM/RBD/RNP motifs) family protein serine/arginine rich-like protein
45a		 -0.59 0.3 -0.31
100 AT4G15120 VQ motif-containing protein 0.59 0.34 -0.32
101 AT2G26420 1-phosphatidylinositol-4-phosphate 5-kinase 3 1-phosphatidylinositol-4-phosphate
5-kinase 3		 0.59 0.31 -0.3
102 AT4G04420 transposable element gene -0.59 0.31 -0.31
103 AT1G02580 SET domain-containing protein EMBRYO DEFECTIVE 173,
FERTILIZATION INDEPENDENT SEED 1,
MEDEA, SET DOMAIN-CONTAINING
PROTEIN 5		 -0.59 0.31 -0.32
104 AT2G20550 HSP40/DnaJ peptide-binding protein 0.59 0.33 -0.32
105 AT1G50340 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.59 0.32 -0.34
106 AT1G52560 HSP20-like chaperones superfamily protein 0.58 0.31 -0.33
107 AT1G63030 Integrase-type DNA-binding superfamily protein DWARF AND DELAYED FLOWERING 2 0.58 0.3 -0.35
108 AT4G11880 AGAMOUS-like 14 AGAMOUS-like 14 0.58 0.31 -0.32
109 AT5G13790 AGAMOUS-like 15 AGAMOUS-like 15 0.58 0.32 -0.32
110 AT4G19980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING:
4 anthesis; Has 30201 Blast hits to 17322 proteins in 780
species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.58 0.31 -0.29
111 AT1G08990 plant glycogenin-like starch initiation protein 5 plant glycogenin-like starch
initiation protein 5		 0.58 0.31 -0.32
112 AT1G22990 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 22		 0.57 0.34 -0.32
113 AT5G02640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits
to 37 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.3 -0.33
114 AT1G31050 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.57 0.3 -0.31
115 AT1G03590 Protein phosphatase 2C family protein 0.57 0.34 -0.31
116 AT2G13760 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24380.1); Has 68 Blast hits
to 68 proteins in 20 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 4; Plants - 43; Viruses - 0; Other
Eukaryotes - 19 (source: NCBI BLink).		 0.57 0.32 -0.31
117 AT1G36940 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.32 -0.33
118 AT2G17660 RPM1-interacting protein 4 (RIN4) family protein 0.57 0.33 -0.32
119 AT1G66470 ROOT HAIR DEFECTIVE6 AtRHD6, ROOT HAIR DEFECTIVE6 0.56 0.3 -0.3
120 AT5G04000 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.56 0.34 -0.34
121 AT5G66250 kinectin-related 0.55 0.31 -0.31
122 AT3G20470 glycine-rich protein 5 ATGRP-5, ATGRP5, GLYCINE-RICH
PROTEIN 5, glycine-rich protein 5		 0.55 0.31 -0.32
123 AT5G10860 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 3 0.55 0.35 -0.31
124 AT5G04200 metacaspase 9 metacaspase 9, metacaspase 2f,
metacaspase 9, metacaspase 2f		 0.55 0.31 -0.32
125 AT4G01120 G-box binding factor 2 BASIC REGION/LEUCINE ZIPPER MOTIF
5, G-box binding factor 2		 0.54 0.3 -0.33
126 AT3G04800 translocase inner membrane subunit 23-3 translocase inner membrane subunit
23-3, translocase inner membrane
subunit 23-3		 0.54 0.33 -0.3
127 AT2G42660 Homeodomain-like superfamily protein 0.54 0.31 -0.31
128 AT4G17220 microtubule-associated proteins 70-5 microtubule-associated proteins
70-5, microtubule-associated
proteins 70-5		 0.53 0.29 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
129 C0110 Guanosine - Guanosine guanosine nucleotides degradation I,
guanine and guanosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage III 		-0.72 0.44 -0.44 C0110
130 C0184 MST_3110.4 - - - -0.65 0.48 -0.48