AGICode | AT1G58270 |
Description | TRAF-like family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G58270 | TRAF-like family protein | ZW9 | 1 | 0.29 | -0.3 | ||
2 | AT1G47270 | tubby like protein 6 | tubby like protein 6, tubby like protein 6 |
0.76 | 0.33 | -0.29 | ||
3 | AT5G05430 | RNA-binding protein | -0.76 | 0.32 | -0.3 | |||
4 | AT1G60710 | NAD(P)-linked oxidoreductase superfamily protein | ATB2 | 0.72 | 0.33 | -0.32 | ||
5 | AT3G05640 | Protein phosphatase 2C family protein | 0.72 | 0.32 | -0.32 | |||
6 | AT1G47960 | cell wall / vacuolar inhibitor of fructosidase 1 | CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1, cell wall / vacuolar inhibitor of fructosidase 1 |
0.71 | 0.32 | -0.33 | ||
7 | AT2G39450 | Cation efflux family protein | ATMTP11, MTP11 | 0.71 | 0.31 | -0.27 | ||
8 | AT5G39950 | thioredoxin 2 | Arabidopsis thioredoxin h2, thioredoxin 2, ATTRXH2, thioredoxin 2, THIOREDOXIN H2 |
0.7 | 0.31 | -0.29 | ||
9 | AT5G10290 | leucine-rich repeat transmembrane protein kinase family protein |
-0.7 | 0.32 | -0.31 | |||
10 | AT4G34750 | SAUR-like auxin-responsive protein family | -0.68 | 0.31 | -0.34 | |||
11 | AT4G36880 | cysteine proteinase1 | cysteine proteinase1 | -0.68 | 0.32 | -0.31 | ||
12 | AT3G15790 | methyl-CPG-binding domain 11 | ATMBD11, methyl-CPG-binding domain 11 |
0.67 | 0.35 | -0.32 | ||
13 | AT1G56600 | galactinol synthase 2 | galactinol synthase 2, galactinol synthase 2 |
0.67 | 0.33 | -0.31 | ||
14 | AT4G32960 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits to 106 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
0.67 | 0.3 | -0.31 | |||
15 | AT1G16850 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, leaf whorl, male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.3 | -0.32 | |||
16 | AT4G27050 | F-box/RNI-like superfamily protein | -0.66 | 0.31 | -0.32 | |||
17 | AT2G12400 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
0.66 | 0.3 | -0.32 | |||
18 | AT4G16990 | disease resistance protein (TIR-NBS class), putative | RESISTANCE TO LEPTOSPHAERIA MACULANS 3 |
-0.66 | 0.33 | -0.32 | ||
19 | AT5G23460 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.65 | 0.33 | -0.32 | |||
20 | AT4G08110 | transposable element gene | 0.65 | 0.31 | -0.31 | |||
21 | AT5G22630 | arogenate dehydratase 5 | arogenate dehydratase 5 | 0.65 | 0.33 | -0.3 | ||
22 | AT5G23020 | 2-isopropylmalate synthase 2 | 2-isopropylmalate synthase 2, METHYLTHIOALKYMALATE SYNTHASE-LIKE, MAM3 |
-0.65 | 0.32 | -0.31 | ||
23 | AT1G71960 | ATP-binding casette family G25 | ATP-binding casette G25, Arabidopsis thaliana ATP-binding cassette G25 |
0.65 | 0.32 | -0.31 | ||
24 | AT3G46820 | type one serine/threonine protein phosphatase 5 | type one serine/threonine protein phosphatase 5 |
-0.65 | 0.32 | -0.31 | ||
25 | AT5G03690 | Aldolase superfamily protein | -0.65 | 0.3 | -0.3 | |||
26 | AT4G03820 | Protein of unknown function (DUF3537) | 0.64 | 0.3 | -0.29 | |||
27 | AT5G46450 | Disease resistance protein (TIR-NBS-LRR class) family | -0.64 | 0.32 | -0.32 | |||
28 | AT5G04000 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.64 | 0.3 | -0.31 | |||
29 | AT5G23230 | nicotinamidase 2 | nicotinamidase 2 | 0.64 | 0.34 | -0.31 | ||
30 | ATMG01370 | hypothetical protein | ORF111D | -0.63 | 0.32 | -0.32 | ||
31 | AT1G16950 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.63 | 0.3 | -0.33 | |||
32 | AT3G22480 | prefoldin 2 | prefoldin 2 | -0.63 | 0.33 | -0.32 | ||
33 | AT3G49000 | RNA polymerase III subunit RPC82 family protein | -0.63 | 0.31 | -0.31 | |||
34 | AT5G19490 | Histone superfamily protein | 0.63 | 0.33 | -0.31 | |||
35 | AT2G20770 | GCR2-like 2 | GCR2-like 2 | 0.63 | 0.35 | -0.3 | ||
36 | AT5G44670 | Domain of unknown function (DUF23) | 0.63 | 0.31 | -0.31 | |||
37 | AT5G01810 | CBL-interacting protein kinase 15 | PROTEIN KINASE 10, CBL-interacting protein kinase 15, PKS3, SOS3-INTERACTING PROTEIN 2, SNF1-RELATED PROTEIN KINASE 3.1 |
0.63 | 0.32 | -0.34 | ||
38 | AT3G46530 | NB-ARC domain-containing disease resistance protein | RECOGNITION OF PERONOSPORA PARASITICA 13 |
-0.63 | 0.3 | -0.33 | ||
39 | AT3G06433 | pseudogene of nodulin MtN3 family protein | 0.62 | 0.33 | -0.32 | |||
40 | AT5G53130 | cyclic nucleotide gated channel 1 | CYCLIC NUCLEOTIDE-GATED CHANNEL 1, cyclic nucleotide gated channel 1 |
0.62 | 0.31 | -0.35 | ||
41 | AT1G74910 | ADP-glucose pyrophosphorylase family protein | -0.62 | 0.31 | -0.32 | |||
42 | AT4G22330 | Alkaline phytoceramidase (aPHC) | ATCES1 | -0.62 | 0.31 | -0.32 | ||
43 | AT5G20050 | Protein kinase superfamily protein | -0.62 | 0.29 | -0.31 | |||
44 | AT4G13460 | SU(VAR)3-9 homolog 9 | SETDOMAIN GROUP 22, SET22, SU(VAR)3-9 homolog 9 |
0.61 | 0.32 | -0.29 | ||
45 | AT1G67865 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67860.1); Has 13 Blast hits to 13 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.33 | -0.33 | |||
46 | AT2G36835 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.3 | -0.32 | |||
47 | AT4G10730 | Protein kinase superfamily protein | 0.61 | 0.29 | -0.32 | |||
48 | AT5G63200 | tetratricopeptide repeat (TPR)-containing protein | -0.61 | 0.33 | -0.32 | |||
49 | AT1G65280 | DNAJ heat shock N-terminal domain-containing protein | 0.61 | 0.32 | -0.32 | |||
50 | AT2G35390 | Phosphoribosyltransferase family protein | -0.61 | 0.33 | -0.33 | |||
51 | AT5G39100 | germin-like protein 6 | germin-like protein 6 | -0.6 | 0.31 | -0.33 | ||
52 | AT5G23220 | nicotinamidase 3 | nicotinamidase 3 | 0.6 | 0.31 | -0.3 | ||
53 | AT5G53160 | regulatory components of ABA receptor 3 | PYR1-like 8, regulatory components of ABA receptor 3 |
-0.6 | 0.3 | -0.33 | ||
54 | AT1G66540 | Cytochrome P450 superfamily protein | 0.6 | 0.29 | -0.33 | |||
55 | AT2G37440 | DNAse I-like superfamily protein | 0.6 | 0.29 | -0.31 | |||
56 | AT5G24750 | UDP-Glycosyltransferase superfamily protein | 0.59 | 0.3 | -0.32 | |||
57 | AT5G05870 | UDP-glucosyl transferase 76C1 | UDP-glucosyl transferase 76C1 | 0.59 | 0.31 | -0.31 | ||
58 | AT3G63060 | EID1-like 3 | EID1-like 3 | 0.59 | 0.33 | -0.31 | ||
59 | AT2G32510 | mitogen-activated protein kinase kinase kinase 17 | mitogen-activated protein kinase kinase kinase 17 |
0.59 | 0.32 | -0.32 | ||
60 | AT5G42280 | Cysteine/Histidine-rich C1 domain family protein | 0.58 | 0.32 | -0.3 | |||
61 | AT4G13630 | Protein of unknown function, DUF593 | 0.58 | 0.32 | -0.31 | |||
62 | AT1G58150 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 9 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.31 | -0.31 | |||
63 | AT4G12460 | OSBP(oxysterol binding protein)-related protein 2B | OSBP(oxysterol binding protein)-related protein 2B |
0.58 | 0.32 | -0.32 | ||
64 | AT5G05710 | Pleckstrin homology (PH) domain superfamily protein | -0.58 | 0.31 | -0.31 | |||
65 | AT5G03200 | RING/U-box superfamily protein | 0.58 | 0.3 | -0.32 | |||
66 | AT4G05390 | root FNR 1 | root FNR 1, root FNR 1 | -0.58 | 0.3 | -0.3 | ||
67 | AT5G02600 | Heavy metal transport/detoxification superfamily protein | SODIUM POTASSIUM ROOT DEFECTIVE 1, nuclear-enriched phloem companion cell gene 6 |
0.58 | 0.32 | -0.32 | ||
68 | AT5G23890 | LOCATED IN: mitochondrion, chloroplast thylakoid membrane, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.58 | 0.31 | -0.33 | |||
69 | AT1G30110 | nudix hydrolase homolog 25 | nudix hydrolase homolog 25, nudix hydrolase homolog 25 |
-0.58 | 0.32 | -0.29 | ||
70 | AT3G08660 | Phototropic-responsive NPH3 family protein | -0.58 | 0.32 | -0.31 | |||
71 | AT4G00700 | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein |
0.58 | 0.31 | -0.29 | |||
72 | AT4G00440 | Protein of unknown function (DUF3741) | 0.58 | 0.32 | -0.31 | |||
73 | AT3G28910 | myb domain protein 30 | ATMYB30, myb domain protein 30 | -0.58 | 0.32 | -0.33 | ||
74 | AT4G32230 | unknown protein; Has 14 Blast hits to 14 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.29 | -0.3 | |||
75 | AT1G27050 | homeobox protein 54 | -0.57 | 0.3 | -0.29 | |||
76 | AT4G31210 | DNA topoisomerase, type IA, core | -0.57 | 0.32 | -0.31 | |||
77 | AT5G20070 | nudix hydrolase homolog 19 | ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 19, nudix hydrolase homolog 19, nudix hydrolase homolog 19 |
0.57 | 0.32 | -0.33 | ||
78 | AT5G06570 | alpha/beta-Hydrolases superfamily protein | -0.57 | 0.34 | -0.3 | |||
79 | AT1G77080 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 27, FLOWERING LOCUS M, MADS AFFECTING FLOWERING 1 |
0.57 | 0.29 | -0.32 | ||
80 | AT5G01180 | peptide transporter 5 | ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 5, peptide transporter 5 |
-0.56 | 0.35 | -0.33 | ||
81 | AT5G62740 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
ATHIR1, AtHIR4, HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1, hypersensitive induced reaction 4 |
-0.56 | 0.3 | -0.3 | ||
82 | AT5G39760 | homeobox protein 23 | homeobox protein 23, homeobox protein 23, ZINC FINGER HOMEODOMAIN 10 |
-0.56 | 0.32 | -0.32 | ||
83 | AT3G09970 | Calcineurin-like metallo-phosphoesterase superfamily protein |
-0.56 | 0.33 | -0.31 | |||
84 | AT5G49530 | SIN-like family protein | -0.56 | 0.34 | -0.33 | |||
85 | AT3G60200 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44600.1); Has 60 Blast hits to 60 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.56 | 0.32 | -0.33 | |||
86 | AT1G11340 | S-locus lectin protein kinase family protein | -0.56 | 0.31 | -0.33 | |||
87 | AT3G10540 | 3-phosphoinositide-dependent protein kinase | -0.56 | 0.29 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
88 | C0038 | 5-(Methylthio)pentylglucosinolate | - | 5-Methylthiopentylglucosinolate | glucosinolate biosynthesis from trihomomethionine | 0.84 | 0.44 | -0.45 | ||
89 | C0057 | Anthranilic acid | - | Anthranilate | tryptophan biosynthesis, benzoylanthranilate biosynthesis |
0.84 | 0.48 | -0.41 | ||
90 | C0033 | 4-(Methylsulfinyl)butylglucosinolate | - | 4-Methylsulfinylbutyl glucosinolate | glucosinolate biosynthesis from dihomomethionine | 0.82 | 0.48 | -0.46 | ||
91 | C0241 | Stigmasterol 3-O-β-D-glucoside | - | Stigmasterol 3-O-β-D-glucoside | - | 0.78 | 0.53 | -0.53 | ||
92 | C0056 | AMP | - | AMP | PRPP biosynthesis I, fatty acid biosynthesis (plant mitochondria), adenine and adenosine salvage VI, biotin-carboxyl carrier protein assembly, molybdenum cofactor biosynthesis II (eukaryotes), gluconeogenesis I, adenine and adenosine salvage II, asparagine biosynthesis I, L-glutamine biosynthesis II (tRNA-dependent), trans-cinnamoyl-CoA biosynthesis, IAA degradation V, ethanol degradation II (cytosol), arginine biosynthesis I, IAA degradation IV, fatty acid activation, selenate reduction, IAA biosynthesis VII, 4-hydroxybenzoate biosynthesis V, tetrapyrrole biosynthesis I, flavonoid biosynthesis, indole-3-acetyl-amino acid biosynthesis, glutamine biosynthesis III, ethanol degradation IV (peroxisomal), glycolysis I, asparagine biosynthesis III (tRNA-dependent), jasmonoyl-amino acid conjugates biosynthesis I, molybdenum cofactor biosynthesis, pyridine nucleotide cycling (plants), scopoletin biosynthesis, jasmonic acid biosynthesis, adenosine nucleotides degradation I, fatty acid beta-oxidation II (core pathway), simple coumarins biosynthesis, sulfate reduction II (assimilatory), pantothenate biosynthesis, sporopollenin precursor biosynthesis, urea cycle, thiamine biosynthesis II, starch degradation II, NAD biosynthesis I (from aspartate), citrulline-nitric oxide cycle, beta-alanine biosynthesis II, arginine biosynthesis II (acetyl cycle), suberin biosynthesis, linoleate biosynthesis I (plants), trans-zeatin biosynthesis, tetrahydrofolate biosynthesis II, purine nucleotides de novo biosynthesis II, phenylpropanoid biosynthesis, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I, purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging |
0.77 | 0.44 | -0.46 | ||
93 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | 0.7 | 0.43 | -0.44 | ||
94 | C0030 | 3-Methylsulfinyl-n-propylglucosinolate | - | 3-Methylsulfinylpropyl-glucosinolate | glucosinolate biosynthesis from homomethionine | 0.7 | 0.45 | -0.46 | ||
95 | C0094 | Galactosamine | D-Galactosamine | - | - | 0.67 | 0.42 | -0.45 | ||
96 | C0267 | Zeatin | cis-Zeatin | cis-Zeatin | cytokinins-O-glucoside biosynthesis, cytokinins degradation, cytokinins 7-N-glucoside biosynthesis, cytokinins 9-N-glucoside biosynthesis, cis-zeatin biosynthesis |
0.67 | 0.44 | -0.41 | ||
97 | C0032 | 3-Phosphoglyceric acid | 3-Phospho-(R)-glyceric acid | 3-Phosphoglycerate | glycolysis I, gluconeogenesis I, Calvin-Benson-Bassham cycle, sucrose biosynthesis I, serine biosynthesis, photorespiration, Rubisco shunt, glycolysis IV (plant cytosol) |
0.66 | 0.41 | -0.46 | ||
98 | C0037 | 5-Methylsulfinyl-n-pentylglucosinolate | - | 5-Methylsulfinylpentyl glucosinolate | glucosinolate biosynthesis from trihomomethionine | 0.61 | 0.3 | -0.31 | ||
99 | C0004 | β-Alanine | - | β-Alanine | uracil degradation II (reductive), pantothenate biosynthesis, beta-alanine biosynthesis II, beta-alanine biosynthesis I |
0.58 | 0.3 | -0.31 |