AT1G48640 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G48640
Description Transmembrane amino acid transporter family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G48640 Transmembrane amino acid transporter family protein 1 0.32 -0.3
2 AT2G33690 Late embryogenesis abundant protein, group 6 -0.7 0.34 -0.29
3 AT3G56600 Protein kinase superfamily protein 0.67 0.31 -0.33
4 AT4G18500 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.31 -0.33
5 AT2G20150 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.32 -0.29
6 AT4G08930 APR-like 6 APR-like 6, APR-like 6 0.66 0.32 -0.31
7 AT1G29600 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.66 0.32 -0.29
8 AT3G26870 Plant self-incompatibility protein S1 family -0.65 0.33 -0.32
9 AT5G37970 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.64 0.31 -0.3
10 AT3G18450 PLAC8 family protein 0.63 0.3 -0.32
11 AT1G33820 unknown protein; Has 46 Blast hits to 44 proteins in 25
species: Archae - 0; Bacteria - 8; Metazoa - 18; Fungi - 1;
Plants - 6; Viruses - 0; Other Eukaryotes - 13 (source:
NCBI BLink).		 0.63 0.32 -0.33
12 AT3G18100 myb domain protein 4r1 myb domain protein 4R1, myb domain
protein 4r1		 -0.63 0.31 -0.31
13 AT1G30710 FAD-binding Berberine family protein 0.63 0.3 -0.3
14 AT1G17760 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS THALIANA CLEAVAGE
STIMULATION FACTOR 77, CSTF77		 -0.62 0.31 -0.3
15 AT5G35420 transposable element gene -0.61 0.31 -0.32
16 AT3G23040 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.31 -0.32
17 AT3G13020 hAT transposon superfamily protein -0.61 0.32 -0.32
18 AT2G40070 BEST Arabidopsis thaliana protein match is: proline-rich
family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.61 0.3 -0.31
19 AT5G62310 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 INCOMPLETE ROOT HAIR ELONGATION 0.6 0.31 -0.32
20 AT3G18120 F-box associated ubiquitination effector family protein -0.6 0.32 -0.32
21 AT4G11840 phospholipase D gamma 3 phospholipase D gamma 3 -0.6 0.33 -0.3
22 AT5G36090 transposable element gene 0.6 0.32 -0.29
23 AT1G36230 unknown protein; Has 5786 Blast hits to 627 proteins in 69
species: Archae - 0; Bacteria - 5701; Metazoa - 46; Fungi -
22; Plants - 13; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.6 0.32 -0.3
24 AT5G47260 ATP binding;GTP binding;nucleotide
binding;nucleoside-triphosphatases		 0.59 0.32 -0.32
25 AT2G23960 Class I glutamine amidotransferase-like superfamily protein 0.59 0.32 -0.32
26 AT4G24580 Rho GTPase activation protein (RhoGAP) with PH domain ROP1 ENHANCER 1 0.59 0.34 -0.31
27 AT5G61320 cytochrome P450, family 89, subfamily A, polypeptide 3 cytochrome P450, family 89,
subfamily A, polypeptide 3		 0.59 0.3 -0.32
28 AT5G18870 Inosine-uridine preferring nucleoside hydrolase family
protein		 nucleoside hydrolase 5 0.58 0.32 -0.32
29 AT2G25070 Protein phosphatase 2C family protein 0.58 0.33 -0.32
30 AT4G15890 binding -0.58 0.31 -0.31
31 AT5G23430 Transducin/WD40 repeat-like superfamily protein -0.58 0.31 -0.29
32 AT5G46115 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.58 0.34 -0.34
33 AT4G04040 Phosphofructokinase family protein maternal effect embryo arrest 51 0.58 0.3 -0.33
34 AT5G01030 Protein of unknown function (DUF3527) -0.57 0.33 -0.33
35 AT5G28820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G27260.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.57 0.31 -0.32
36 AT2G34320 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.57 0.31 -0.33
37 AT2G24840 AGAMOUS-like 61 AGAMOUS-like 61, DIANA 0.57 0.28 -0.33
38 AT1G44050 Cysteine/Histidine-rich C1 domain family protein 0.57 0.31 -0.32
39 AT1G12230 Aldolase superfamily protein 0.57 0.32 -0.31
40 AT3G51910 heat shock transcription factor A7A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A7A, heat
shock transcription factor A7A		 0.57 0.29 -0.32
41 AT3G62640 Protein of unknown function (DUF3511) -0.57 0.35 -0.31
42 AT1G51880 root hair specific 6 root hair specific 6 0.57 0.31 -0.31
43 AT5G07740 actin binding -0.57 0.3 -0.34
44 AT1G18290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.56 0.31 -0.32
45 AT4G18890 BES1/BZR1 homolog 3 BES1/BZR1 homolog 3 -0.56 0.3 -0.32
46 AT5G54950 Aconitase family protein -0.56 0.34 -0.32
47 AT5G20930 Protein kinase superfamily protein TOUSLED -0.56 0.31 -0.3
48 AT3G15370 expansin 12 ATEXP12, expansin 12, ATHEXP ALPHA
1.24, EXPANSIN 12, expansin 12		 0.56 0.31 -0.31
49 AT1G64320 myosin heavy chain-related -0.56 0.34 -0.31
50 AT3G07930 DNA glycosylase superfamily protein 0.56 0.31 -0.33
51 AT1G11380 PLAC8 family protein 0.56 0.32 -0.31
52 AT2G45580 cytochrome P450, family 76, subfamily C, polypeptide 3 cytochrome P450, family 76,
subfamily C, polypeptide 3		 0.56 0.3 -0.33
53 AT3G13840 GRAS family transcription factor -0.55 0.3 -0.32
54 AT4G02490 transposable element gene 0.55 0.33 -0.3
55 AT1G71130 Integrase-type DNA-binding superfamily protein cytokinin response factor 8 0.55 0.33 -0.29
56 AT1G04930 hydroxyproline-rich glycoprotein family protein 0.55 0.31 -0.29
57 AT3G43500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G42080.1); Has 8 Blast hits to
8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.55 0.31 -0.31
58 AT2G29100 glutamate receptor 2.9 glutamate receptor 2.9, GLUTAMATE
RECEPTOR 2.9, glutamate receptor
2.9		 0.55 0.31 -0.31
59 AT5G32590 myosin heavy chain-related 0.55 0.31 -0.31
60 AT2G25560 DNAJ heat shock N-terminal domain-containing protein -0.54 0.32 -0.31
61 AT1G23600 Domain of unknown function DUF220 0.54 0.31 -0.29
62 AT1G59725 DNAJ heat shock family protein 0.54 0.31 -0.32
63 AT4G36790 Major facilitator superfamily protein 0.54 0.32 -0.31
64 AT2G13680 callose synthase 5 ARABIDOPSIS THALIANA GLUCAN
SYNTHASE-LIKE 2, callose synthase
5, GLUCAN SYNTHASE-LIKE 2		 0.54 0.32 -0.33
65 AT5G47360 Tetratricopeptide repeat (TPR)-like superfamily protein -0.54 0.33 -0.34
66 AT3G10390 Flavin containing amine oxidoreductase family protein FLOWERING LOCUS D -0.54 0.32 -0.31
67 AT5G20170 RNA polymerase II transcription mediators -0.54 0.3 -0.31
68 AT3G20140 cytochrome P450, family 705, subfamily A, polypeptide 23 cytochrome P450, family 705,
subfamily A, polypeptide 23		 0.54 0.32 -0.29
69 AT5G63940 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.54 0.28 -0.32
70 AT5G19430 RING/U-box superfamily protein 0.53 0.31 -0.31
71 AT1G03190 RAD3-like DNA-binding helicase protein ARABIDOPSIS THALIANA XERODERMA
PIGMENTOSUM GROUP D, ULTRAVIOLET
HYPERSENSITIVE 6		 -0.53 0.32 -0.31
72 AT3G42640 H(+)-ATPase 8 H(+)-ATPase 8, H(+)-ATPase 8 -0.53 0.34 -0.3
73 AT5G16790 Tho complex subunit 7/Mft1p AtTHO7, THO7 0.53 0.31 -0.32
74 AT1G33350 Pentatricopeptide repeat (PPR) superfamily protein -0.53 0.33 -0.32
75 AT1G69180 Plant-specific transcription factor YABBY family protein CRABS CLAW -0.53 0.34 -0.3
76 ATMG00050 hypothetical protein ORF131 0.53 0.3 -0.3
77 AT2G39530 Uncharacterised protein family (UPF0497) 0.53 0.33 -0.31
78 AT2G35570 pseudogene, serpin (serine protease inhibitor) family,
similar to phloem serpin-1 (Cucurbita maxima) GI:9937311;
blastp match of 49% identity and 9.9e-85 P-value to
GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein
{Citrus x paradisi}		 0.53 0.32 -0.34
79 AT2G07630 transposable element gene -0.53 0.31 -0.3
80 AT1G03020 Thioredoxin superfamily protein 0.53 0.32 -0.32
81 AT3G44570 Arabidopsis retrotransposon ORF-1 protein 0.53 0.32 -0.31
82 AT3G43150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G11010.1); Has 34 Blast hits
to 32 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.34 -0.31
83 AT2G01770 vacuolar iron transporter 1 ATVIT1, vacuolar iron transporter
1		 -0.52 0.3 -0.33
84 AT2G29110 glutamate receptor 2.8 glutamate receptor 2.8, GLR2.8,
glutamate receptor 2.8		 -0.52 0.33 -0.31
85 AT2G01750 microtubule-associated proteins 70-3 microtubule-associated proteins
70-3, microtubule-associated
proteins 70-3		 -0.52 0.33 -0.31
86 AT4G05230 Ubiquitin-like superfamily protein -0.52 0.31 -0.32
87 AT4G21730 pseudogene of N-ethylmaleimide sensitive factor (NSF) -0.52 0.31 -0.31
88 AT4G09140 MUTL-homologue 1 ARABIDOPSIS THALIANA
MUTL-HOMOLOGUE 1, MUTL-homologue 1		 -0.51 0.32 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
89 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		0.68 0.44 -0.47 C0186
90 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		0.65 0.43 -0.43 C0088
91 C0114 Homocystine L-Homocystine - - 0.57 0.32 -0.32