AT1G48800 : -
Query Information
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AGICode AT1G48800
Description Terpenoid cyclases/Protein prenyltransferases superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G48800 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 1 0.34 -0.33
2 AT2G30270 Protein of unknown function (DUF567) -0.62 0.33 -0.32
3 AT1G12230 Aldolase superfamily protein -0.61 0.33 -0.3
4 AT5G03415 Transcription factor DP ATDPB, DPB -0.6 0.29 -0.32
5 AT1G32970 Subtilisin-like serine endopeptidase family protein -0.59 0.28 -0.29
6 AT1G79890 RAD3-like DNA-binding helicase protein 0.58 0.3 -0.32
7 AT3G43840 3-oxo-5-alpha-steroid 4-dehydrogenase family protein 0.56 0.32 -0.32
8 AT1G55915 zinc ion binding 0.55 0.33 -0.32
9 AT2G30380 Plant protein of unknown function (DUF641) 0.55 0.32 -0.3
10 AT4G33925 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 suppressor of sni1 2 0.54 0.3 -0.31
11 AT5G24400 NagB/RpiA/CoA transferase-like superfamily protein EMBRYO DEFECTIVE 2024,
6-PHOSPHOGLUCONOLACTONASE 3		 -0.54 0.32 -0.32
12 AT1G33220 Glycosyl hydrolase superfamily protein -0.53 0.3 -0.33
13 AT4G24260 glycosyl hydrolase 9A3 glycosyl hydrolase 9A3, glycosyl
hydrolase 9A3, KOR3		 0.53 0.31 -0.31
14 AT5G61320 cytochrome P450, family 89, subfamily A, polypeptide 3 cytochrome P450, family 89,
subfamily A, polypeptide 3		 -0.53 0.32 -0.28
15 AT3G15370 expansin 12 ATEXP12, expansin 12, ATHEXP ALPHA
1.24, EXPANSIN 12, expansin 12		 -0.52 0.32 -0.32
16 AT2G06180 transposable element gene 0.52 0.33 -0.32
17 AT4G25540 homolog of DNA mismatch repair protein MSH3 ATMSH3, homolog of DNA mismatch
repair protein MSH3		 0.52 0.29 -0.32
18 AT2G17030 F-box family protein with a domain of unknown function
(DUF295)		 -0.52 0.33 -0.32
19 AT3G11200 alfin-like 2 alfin-like 2 -0.51 0.32 -0.32
20 AT5G11400 Protein kinase superfamily protein 0.51 0.32 -0.32
21 AT3G31340 transposable element gene 0.51 0.3 -0.31
22 AT2G07230 transposable element gene -0.51 0.3 -0.28
23 AT5G14430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.51 0.32 -0.32
24 AT2G19300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.51 0.3 -0.29
25 AT5G55680 glycine-rich protein 0.51 0.32 -0.33
26 AT4G02490 transposable element gene -0.5 0.32 -0.32
27 AT2G28270 Cysteine/Histidine-rich C1 domain family protein -0.49 0.32 -0.34
28 AT1G36970 Domain of unknown function (DUF1985) 0.49 0.3 -0.29
29 AT3G25640 Protein of unknown function, DUF617 0.49 0.34 -0.31
30 AT5G55020 myb domain protein 120 ATMYB120, myb domain protein 120 -0.49 0.29 -0.31
31 AT1G34650 homeodomain GLABROUS 10 homeodomain GLABROUS 10 0.48 0.33 -0.3
32 AT5G16850 telomerase reverse transcriptase telomerase reverse transcriptase,
telomerase reverse transcriptase		 0.48 0.3 -0.34
33 AT4G17750 heat shock factor 1 ARABIDOPSIS THALIANA HEAT SHOCK
FACTOR 1, ARABIDOPSIS THALIANA
CLASS A HEAT SHOCK FACTOR 1A, heat
shock factor 1, CLASS A HEAT SHOCK
FACTOR 1A		 -0.48 0.3 -0.32
34 AT5G07740 actin binding 0.48 0.31 -0.32
35 AT2G43220 Cysteine/Histidine-rich C1 domain family protein -0.48 0.31 -0.32
36 AT3G58540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G06190.2); Has 6 Blast
hits to 6 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.47 0.33 -0.32
37 AT1G20780 senescence-associated E3 ubiquitin ligase 1 ARABIDOPSIS THALIANA PLANT U-BOX
44, PLANT U-BOX 44,
senescence-associated E3 ubiquitin
ligase 1		 0.47 0.31 -0.32
38 AT1G42200 transposable element gene 0.47 0.32 -0.29
39 AT3G30330 transposable element gene 0.46 0.29 -0.32
40 AT4G21050 Dof-type zinc finger domain-containing protein 0.45 0.3 -0.31
41 AT4G25120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
RAD SIX-SCREEN MUTANT 2,
SUPPRESSOR OF RAD SIX-SCREEN
MUTANT 2		 0.45 0.34 -0.34
42 AT1G36830 transposable element gene -0.45 0.31 -0.31
43 AT3G44180 syntaxin-related family protein 0.45 0.32 -0.31
44 AT3G52700 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.45 0.31 -0.3
45 AT3G60720 plasmodesmata-located protein 8 plasmodesmata-located protein 8 -0.45 0.31 -0.31
46 AT1G47770 Beta-galactosidase related protein -0.45 0.3 -0.31
47 AT1G62720 Pentatricopeptide repeat (PPR-like) superfamily protein AtNG1, novel gene 1 0.44 0.31 -0.34
48 AT3G49280 transposable element gene 0.44 0.33 -0.32
49 AT3G31403 transposable element gene 0.43 0.3 -0.32
50 AT5G40430 myb domain protein 22 myb domain protein 22, myb domain
protein 22		 0.42 0.32 -0.32
51 AT3G25810 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.41 0.32 -0.3
52 AT2G33100 cellulose synthase-like D1 cellulose synthase-like D1,
cellulose synthase-like D1,
CELLULOSE-SYNTHASE LIKE D1		 0.41 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
53 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis -0.78 0.43 -0.44
54 C0026 2-Hydroxyisobutyric acid - - β oxidation -0.72 0.45 -0.41
55 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis 		-0.72 0.45 -0.48 C0073
56 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		-0.68 0.44 -0.44 C0088
57 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		-0.66 0.45 -0.46 C0186
58 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		-0.65 0.46 -0.45 C0262
59 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.63 0.44 -0.46 C0091
60 C0259 Tyramine - Tyramine hydroxycinnamic acid tyramine amides biosynthesis,
suberin biosynthesis 		-0.6 0.31 -0.31 C0259
61 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		-0.58 0.45 -0.45 C0261
62 C0243 Succinic acid - Succinate flavonol biosynthesis,
glyoxylate cycle,
gibberellin biosynthesis III (early C-13 hydroxylation),
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
aerobic respiration (alternative oxidase pathway),
gibberellin inactivation I (2beta-hydroxylation),
4-aminobutyrate degradation IV,
luteolin biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
leucodelphinidin biosynthesis,
glutamate degradation IV,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
succinate + a ubiquinone -> a ubiquinol + fumarate,
gibberellin biosynthesis II (early C-3 hydroxylation),
flavonoid biosynthesis,
superpathway of glyoxylate cycle and fatty acid degradation,
aerobic respiration (cytochrome c),
leucopelargonidin and leucocyanidin biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
scopoletin biosynthesis 		-0.57 0.3 -0.31 C0243
63 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		-0.57 0.46 -0.45 C0027
64 C0062 Betain - - - -0.54 0.31 -0.3
65 C0061 Aspartic acid L-Aspartic acid L-Aspartate purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging,
indole-3-acetyl-amino acid biosynthesis,
citrulline-nitric oxide cycle,
asparagine degradation I,
cyanide detoxification II,
asparagine biosynthesis I,
asparagine biosynthesis III (tRNA-dependent),
arginine biosynthesis I,
inosine-5'-phosphate biosynthesis II,
uridine-5'-phosphate biosynthesis,
aspartate biosynthesis,
homoserine biosynthesis,
lysine biosynthesis VI,
aspartate degradation II,
urea cycle,
purine nucleotides de novo biosynthesis II,
NAD biosynthesis I (from aspartate),
IAA degradation IV,
arginine biosynthesis II (acetyl cycle) 		-0.54 0.31 -0.3 C0061
66 C0066 Choline - Choline choline biosynthesis III,
phosphatidylcholine biosynthesis I,
choline biosynthesis I,
glycine betaine biosynthesis III (plants),
choline biosynthesis II,
sinapate ester biosynthesis,
phospholipases 		-0.49 0.32 -0.32 C0066
67 C0069 Citrulline - Citrulline citrulline-nitric oxide cycle,
citrulline biosynthesis,
nitric oxide biosynthesis I (in plants),
urea cycle,
citrulline degradation,
arginine biosynthesis II (acetyl cycle),
arginine biosynthesis I 		-0.48 0.33 -0.36 C0069
68 C0112 Histidine L-Histidine L-Histidine tRNA charging,
histidine biosynthesis 		-0.46 0.32 -0.32 C0112