AT1G58200 : MSCS-like 3
Query Information
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AGICode AT1G58200
Description MSCS-like 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G58200 MSCS-like 3 MSCS-like 3 1 0.34 -0.33
2 AT2G20920 Protein of unknown function (DUF3353) 0.85 0.31 -0.32
3 AT3G56620 nodulin MtN21 /EamA-like transporter family protein 0.84 0.32 -0.31
4 AT1G01710 Acyl-CoA thioesterase family protein 0.83 0.32 -0.32
5 AT5G02940 Protein of unknown function (DUF1012) 0.83 0.31 -0.29
6 AT2G29450 glutathione S-transferase tau 5 AT103-1A, ARABIDOPSIS THALIANA
GLUTATHIONE S-TRANSFERASE TAU 1,
glutathione S-transferase tau 5,
glutathione S-transferase tau 5		 0.83 0.31 -0.3
7 AT4G37980 elicitor-activated gene 3-1 ATCAD7, CINNAMYL-ALCOHOL
DEHYDROGENASE 7,
ELICITOR-ACTIVATED GENE 3,
elicitor-activated gene 3-1		 0.82 0.31 -0.32
8 AT5G13800 pheophytinase Co-regulated with NYE1,
pheophytinase		 0.82 0.31 -0.31
9 AT1G61065 Protein of unknown function (DUF1218) 0.82 0.32 -0.31
10 AT4G39540 shikimate kinase 2 ATSK2, shikimate kinase 2 0.82 0.32 -0.31
11 AT1G63660 GMP synthase (glutamine-hydrolyzing), putative / glutamine
amidotransferase, putative		 -0.82 0.31 -0.31
12 AT4G29670 atypical CYS HIS rich thioredoxin 2 atypical CYS HIS rich thioredoxin
2		 0.81 0.33 -0.31
13 AT4G18140 SCP1-like small phosphatase 4b SCP1-like small phosphatase 4b 0.81 0.3 -0.32
14 AT4G21790 tobamovirus multiplication 1 ATTOM1, tobamovirus multiplication
1		 0.81 0.32 -0.32
15 AT5G57815 Cytochrome c oxidase, subunit Vib family protein 0.81 0.34 -0.32
16 AT1G30220 inositol transporter 2 ARABIDOPSIS THALIANA INOSITOL
TRANSPORTER 2, inositol
transporter 2		 0.81 0.33 -0.33
17 AT5G24420 6-phosphogluconolactonase 5 6-phosphogluconolactonase 5 0.8 0.31 -0.35
18 AT3G20050 T-complex protein 1 alpha subunit T-complex protein 1 alpha subunit,
T-complex protein 1 alpha subunit		 -0.8 0.32 -0.31
19 AT2G24860 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.8 0.31 -0.32
20 AT3G03960 TCP-1/cpn60 chaperonin family protein -0.8 0.35 -0.32
21 AT5G43430 electron transfer flavoprotein beta electron transfer flavoprotein
beta		 0.8 0.32 -0.34
22 AT1G24510 TCP-1/cpn60 chaperonin family protein -0.79 0.32 -0.32
23 AT5G19070 SNARE associated Golgi protein family 0.79 0.33 -0.31
24 AT5G24450 Transcription factor IIIC, subunit 5 0.79 0.31 -0.31
25 AT2G46510 ABA-inducible BHLH-type transcription factor ABA-inducible BHLH-type
transcription factor,
ABA-inducible BHLH-type
transcription factor		 0.79 0.29 -0.3
26 AT4G11960 PGR5-like B PGR5-like B 0.79 0.3 -0.32
27 AT1G24070 cellulose synthase-like A10 cellulose synthase-like A10,
CELLULOSE SYNTHASE LIKE A10,
cellulose synthase-like A10		 0.79 0.31 -0.3
28 AT1G13730 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 -0.79 0.32 -0.32
29 AT2G43430 glyoxalase 2-1 glyoxalase 2-1, GLYOXALASE II 0.79 0.32 -0.32
30 AT4G34555 Ribosomal protein S25 family protein -0.78 0.33 -0.3
31 AT2G43530 Scorpion toxin-like knottin superfamily protein 0.78 0.32 -0.3
32 AT2G46030 ubiquitin-conjugating enzyme 6 ubiquitin-conjugating enzyme 6 0.78 0.3 -0.3
33 AT1G26910 Ribosomal protein L16p/L10e family protein ribosomal protein L10 B -0.78 0.3 -0.31
34 AT1G48630 receptor for activated C kinase 1B receptor for activated C kinase
1B, receptor for activated C
kinase 1B		 -0.78 0.32 -0.31
35 AT3G55110 ABC-2 type transporter family protein ATP-binding cassette G18 0.78 0.34 -0.31
36 AT1G20950 Phosphofructokinase family protein -0.78 0.34 -0.31
37 AT2G22690 zinc ion binding 0.78 0.3 -0.29
38 AT5G61020 evolutionarily conserved C-terminal region 3 evolutionarily conserved
C-terminal region 3		 -0.78 0.34 -0.32
39 AT3G55280 ribosomal protein L23AB RIBOSOMAL PROTEIN L23A2, ribosomal
protein L23AB		 -0.78 0.33 -0.33
40 AT1G53280 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog B, DJ-1 homolog B 0.78 0.32 -0.31
41 AT3G20240 Mitochondrial substrate carrier family protein -0.78 0.32 -0.34
42 AT3G06500 Plant neutral invertase family protein alkaline/neutral invertase C 0.77 0.33 -0.3
43 AT5G19920 Transducin/WD40 repeat-like superfamily protein -0.77 0.3 -0.34
44 AT1G80270 PENTATRICOPEPTIDE REPEAT 596 PENTATRICOPEPTIDE REPEAT 596 -0.77 0.32 -0.31
45 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 -0.77 0.3 -0.32
46 AT3G18130 receptor for activated C kinase 1C receptor for activated C kinase
1C, receptor for activated C
kinase 1C		 -0.77 0.31 -0.31
47 AT3G53960 Major facilitator superfamily protein 0.77 0.32 -0.28
48 AT5G47210 Hyaluronan / mRNA binding family -0.77 0.33 -0.33
49 AT5G41670 6-phosphogluconate dehydrogenase family protein -0.77 0.29 -0.34
50 AT4G36470 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.77 0.31 -0.31
51 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10		 -0.77 0.3 -0.32
52 AT3G11880 Protein of unknown function DUF2359, transmembrane 0.76 0.3 -0.33
53 AT5G66750 chromatin remodeling 1 ATDDM1, CHA1, CHROMATIN REMODELING
1, chromatin remodeling 1,
DECREASED DNA METHYLATION 1,
SOMNIFEROUS 1, SOM4		 -0.76 0.33 -0.31
54 AT4G37270 heavy metal atpase 1 ARABIDOPSIS THALIANA HEAVY METAL
ATPASE 1, heavy metal atpase 1		 0.76 0.34 -0.34
55 AT2G35490 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.76 0.33 -0.3
56 AT1G43130 like COV 2 like COV 2 0.76 0.31 -0.32
57 AT1G07070 Ribosomal protein L35Ae family protein -0.76 0.31 -0.31
58 AT1G05840 Eukaryotic aspartyl protease family protein 0.76 0.32 -0.32
59 AT4G10480 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 -0.76 0.31 -0.32
60 AT1G23410 Ribosomal protein S27a / Ubiquitin family protein -0.76 0.3 -0.32
61 AT3G11250 Ribosomal protein L10 family protein -0.76 0.3 -0.32
62 AT3G44750 histone deacetylase 3 ATHD2A, HISTONE DEACETYLASE 2A,
histone deacetylase 3, HDT1		 -0.76 0.31 -0.34
63 AT5G64140 ribosomal protein S28 ribosomal protein S28 -0.76 0.33 -0.32
64 AT5G20890 TCP-1/cpn60 chaperonin family protein -0.76 0.31 -0.3
65 AT4G25630 fibrillarin 2 ATFIB2, fibrillarin 2 -0.76 0.29 -0.32
66 AT2G27830 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits
to 131 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.76 0.33 -0.33
67 AT4G22340 cytidinediphosphate diacylglycerol synthase 2 cytidinediphosphate diacylglycerol
synthase 2		 0.75 0.31 -0.33
68 AT1G61580 R-protein L3 B ARABIDOPSIS RIBOSOMAL PROTEIN 2,
R-protein L3 B		 -0.75 0.32 -0.31
69 AT5G18640 alpha/beta-Hydrolases superfamily protein 0.75 0.32 -0.32
70 AT4G17520 Hyaluronan / mRNA binding family -0.75 0.29 -0.32
71 AT3G17250 Protein phosphatase 2C family protein 0.75 0.32 -0.32
72 AT3G16180 Major facilitator superfamily protein -0.75 0.31 -0.3
73 AT3G16780 Ribosomal protein L19e family protein -0.75 0.3 -0.3
74 AT1G44790 ChaC-like family protein 0.75 0.33 -0.33
75 AT3G54360 zinc ion binding 0.75 0.3 -0.32
76 AT3G62010 unknown protein; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; Has 553 Blast hits to 216 proteins in 93
species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi -
58; Plants - 108; Viruses - 0; Other Eukaryotes - 70
(source: NCBI BLink).		 0.75 0.31 -0.31
77 AT5G08180 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.75 0.3 -0.32
78 AT4G33940 RING/U-box superfamily protein 0.75 0.31 -0.31
79 AT2G34310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G29530.1); Has 1236 Blast hits to 680 proteins in
89 species: Archae - 0; Bacteria - 0; Metazoa - 473; Fungi
- 0; Plants - 332; Viruses - 0; Other Eukaryotes - 431
(source: NCBI BLink).		 0.75 0.33 -0.32
80 AT3G19990 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 118 Blast hits to 118 proteins in 41 species: Archae -
0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 56;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).		 0.75 0.31 -0.3
81 AT3G01200 PPDK regulatory protein 2 PPDK regulatory protein 2, PPDK
regulatory protein 2		 0.75 0.33 -0.31
82 AT3G09630 Ribosomal protein L4/L1 family -0.75 0.33 -0.3
83 AT5G62440 Protein of unknown function (DUF3223) -0.75 0.32 -0.33
84 AT4G19840 phloem protein 2-A1 phloem protein 2-A1, phloem
protein 2-A1, phloem protein 2-A1		 0.75 0.29 -0.31
85 AT3G57490 Ribosomal protein S5 family protein -0.74 0.3 -0.32
86 AT5G18290 Aquaporin-like superfamily protein SIP1;2, SMALL AND BASIC INTRINSIC
PROTEIN 1B		 0.74 0.32 -0.34
87 AT3G55010 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast
/ phosphoribosyl-aminoimidazole synthetase / AIR synthase
(PUR5)		 ATPURM, EMBRYO DEFECTIVE 2818,
PUR5		 -0.74 0.3 -0.32
88 AT1G01725 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G00530.1); Has 20 Blast hits to 20 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.3 -0.31
89 AT5G11840 Protein of unknown function (DUF1230) 0.74 0.3 -0.31
90 AT1G52000 Mannose-binding lectin superfamily protein 0.74 0.32 -0.33
91 AT1G31170 sulfiredoxin SULFIREDOXIN, sulfiredoxin 0.74 0.3 -0.31
92 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4		 -0.74 0.34 -0.34
93 AT5G13760 Plasma-membrane choline transporter family protein 0.74 0.31 -0.32
94 AT5G50310 Galactose oxidase/kelch repeat superfamily protein -0.74 0.31 -0.3
95 AT5G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits
to 136 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.34 -0.28
96 AT1G72230 Cupredoxin superfamily protein -0.74 0.32 -0.33
97 AT3G44620 protein tyrosine phosphatases;protein tyrosine phosphatases 0.73 0.3 -0.31
98 AT3G25740 methionine aminopeptidase 1C methionine aminopeptidase 1C,
METHIONINE AMINOPEPTIDASE 1C		 0.73 0.33 -0.31
99 AT4G01897 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF952 (InterPro:IPR009297); Has 763 Blast
hits to 763 proteins in 180 species: Archae - 0; Bacteria -
351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0;
Other Eukaryotes - 383 (source: NCBI BLink).		 0.73 0.31 -0.32
100 AT5G57550 xyloglucan endotransglucosylase/hydrolase 25 xyloglucan
endotransglucosylase/hydrolase 25,
xyloglucan endotransglycosylase 3		 0.73 0.33 -0.33
101 AT1G76800 Vacuolar iron transporter (VIT) family protein -0.73 0.29 -0.33
102 AT3G26580 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.3 -0.32
103 AT1G60390 polygalacturonase 1 polygalacturonase 1 -0.73 0.33 -0.31
104 AT5G19855 Chaperonin-like RbcX protein AtRbcX2, homologue of
cyanobacterial RbcX 2		 0.73 0.32 -0.32
105 AT3G45770 Polyketide synthase, enoylreductase family protein 0.73 0.28 -0.32
106 AT3G60810 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1499 (InterPro:IPR010865); Has 444
Blast hits to 444 proteins in 143 species: Archae - 0;
Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51;
Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).		 0.73 0.3 -0.33
107 AT1G29760 Putative adipose-regulatory protein (Seipin) 0.73 0.31 -0.32
108 AT4G20380 LSD1 zinc finger family protein LESION SIMULATING DISEASE 0.73 0.32 -0.34
109 AT3G02530 TCP-1/cpn60 chaperonin family protein -0.73 0.3 -0.33
110 AT4G15440 hydroperoxide lyase 1 CYP74B2, hydroperoxide lyase 1 0.73 0.33 -0.31
111 AT1G79650 Rad23 UV excision repair protein family Arabidopsis thaliana aldehyde
oxidase 1, RADIATION SENSITIVE23B		 -0.73 0.32 -0.33
112 AT3G57800 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.73 0.31 -0.31
113 AT3G06700 Ribosomal L29e protein family -0.73 0.32 -0.31
114 AT1G56110 homolog of nucleolar protein NOP56 homolog of nucleolar protein NOP56 -0.72 0.31 -0.31
115 AT5G58420 Ribosomal protein S4 (RPS4A) family protein -0.72 0.31 -0.31
116 AT3G57290 eukaryotic translation initiation factor 3E ATEIF3E-1, ATINT6, eukaryotic
translation initiation factor 3E,
INT-6, INT6, TIF3E1		 -0.72 0.31 -0.34
117 AT1G64405 unknown protein; Has 13 Blast hits to 13 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.34 -0.32
118 AT2G25210 Ribosomal protein L39 family protein -0.72 0.32 -0.32
119 AT1G75990 PAM domain (PCI/PINT associated module) protein -0.72 0.3 -0.3
120 AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.72 0.3 -0.3
121 AT2G19750 Ribosomal protein S30 family protein -0.72 0.33 -0.31
122 AT1G34130 staurosporin and temperature sensitive 3-like b staurosporin and temperature
sensitive 3-like b		 -0.72 0.32 -0.31
123 AT3G18190 TCP-1/cpn60 chaperonin family protein -0.72 0.32 -0.34
124 AT3G63130 RAN GTPase activating protein 1 RAN GTPASE-ACTIVATING PROTEIN 1,
RAN GTPase activating protein 1		 -0.72 0.31 -0.32
125 AT5G08640 flavonol synthase 1 ATFLS1, FLAVONOL SYNTHASE,
flavonol synthase 1		 -0.72 0.31 -0.32
126 AT5G22650 histone deacetylase 2B ARABIDOPSIS HISTONE DEACETYLASE 2,
ATHD2B, HISTONE DEACETYLASE 2,
histone deacetylase 2B, HDA4,
HDT02, HDT2		 -0.72 0.32 -0.31
127 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57		 -0.71 0.3 -0.33
128 AT4G11420 eukaryotic translation initiation factor 3A ATEIF3A-1, ATTIF3A1, eukaryotic
translation initiation factor 3A,
EIF3A-1, TIF3A1		 -0.71 0.3 -0.32
129 AT1G80750 Ribosomal protein L30/L7 family protein -0.71 0.32 -0.33
130 AT1G18040 cyclin-dependent kinase D1;3 CYCLIN-DEPENDENT KINASE D1;3,
CAK2AT, cyclin-dependent kinase
D1;3		 -0.71 0.32 -0.33
131 AT1G08360 Ribosomal protein L1p/L10e family -0.71 0.29 -0.33
132 AT4G31700 ribosomal protein S6 ribosomal protein S6, RPS6A -0.71 0.32 -0.3
133 AT5G46700 Tetraspanin family protein TETRASPANIN 1, TORNADO 2 -0.71 0.32 -0.3
134 AT5G59240 Ribosomal protein S8e family protein -0.71 0.31 -0.31
135 AT5G65670 indole-3-acetic acid inducible 9 indole-3-acetic acid inducible 9 -0.71 0.29 -0.29
136 AT5G02530 RNA-binding (RRM/RBD/RNP motifs) family protein -0.71 0.3 -0.31
137 AT3G61110 ribosomal protein S27 ribosomal protein S27, ribosomal
protein S27		 -0.71 0.3 -0.31
138 AT2G21580 Ribosomal protein S25 family protein -0.71 0.32 -0.29
139 AT3G49080 Ribosomal protein S5 domain 2-like superfamily protein -0.71 0.33 -0.32
140 AT4G32720 La protein 1 La protein 1, La protein 1 -0.71 0.3 -0.33
141 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 -0.71 0.32 -0.33
142 AT5G11240 transducin family protein / WD-40 repeat family protein -0.71 0.31 -0.33
143 AT4G31120 SHK1 binding protein 1 ATPRMT5, PROTEIN ARGININE
METHYLTRANSFERASE 5, SHK1 binding
protein 1		 -0.71 0.32 -0.31
144 AT3G57000 nucleolar essential protein-related -0.7 0.32 -0.35
145 AT3G23620 Ribosomal RNA processing Brix domain protein -0.7 0.31 -0.29
146 AT2G14460 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.7 0.3 -0.32
147 AT5G52470 fibrillarin 1 ATFBR1, ATFIB1, FIBRILLARIN 1,
fibrillarin 1,
SKP1/ASK1-INTERACTING PROTEIN		 -0.7 0.31 -0.32
148 AT4G22380 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.7 0.33 -0.33
149 AT2G35605 SWIB/MDM2 domain superfamily protein -0.7 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
150 C0182 MST_2996.4 - - - 0.84 0.46 -0.48
151 C0190 O-acetyl-L-Serine - O-acetyl-L-Serine cysteine biosynthesis I,
seleno-amino acid biosynthesis 		0.8 0.43 -0.43 C0190
152 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		0.8 0.46 -0.44 C0220
153 C0169 MST_2105.7 - - - 0.73 0.49 -0.44