AT3G12400 : ATELC
Query Information
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AGICode AT3G12400
Description Ubiquitin-conjugating enzyme/RWD-like protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G12400 Ubiquitin-conjugating enzyme/RWD-like protein ATELC, ELC 1 0.33 -0.32
2 AT5G43190 Galactose oxidase/kelch repeat superfamily protein 0.83 0.32 -0.32
3 AT3G25620 ABC-2 type transporter family protein ATP-binding cassette G21 0.83 0.33 -0.3
4 AT5G43430 electron transfer flavoprotein beta electron transfer flavoprotein
beta		 0.83 0.3 -0.33
5 AT3G15580 Ubiquitin-like superfamily protein AUTOPHAGY 8H, AUTOPHAGY 8I 0.83 0.32 -0.34
6 AT5G16830 syntaxin of plants 21 ATPEP12, ATSYP21, PEP12, PEP12P,
syntaxin of plants 21		 0.82 0.33 -0.3
7 AT3G27400 Pectin lyase-like superfamily protein -0.82 0.3 -0.28
8 AT1G54130 RELA/SPOT homolog 3 AT-RSH3, RELA/SPOT HOMOLOG 3,
RELA/SPOT homolog 3		 0.82 0.33 -0.32
9 AT2G37860 Protein of unknown function (DUF3411) LOWER CELL DENSITY 1 -0.81 0.3 -0.3
10 AT4G13270 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.81 0.33 -0.33
11 AT4G33090 aminopeptidase M1 aminopeptidase M1, AMINOPEPTIDASE
M1		 0.81 0.3 -0.33
12 AT5G54870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27020.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.81 0.32 -0.32
13 AT4G21810 DERLIN-2.1 DERLIN-2.1 0.81 0.32 -0.29
14 AT1G76490 hydroxy methylglutaryl CoA reductase 1 AtHMGR1, hydroxy methylglutaryl
CoA reductase 1,
3-HYDROXY-3-METHYLGLUTARYL COA
REDUCTASE 1		 0.81 0.32 -0.32
15 AT1G68820 Transmembrane Fragile-X-F-associated protein 0.8 0.31 -0.32
16 AT1G61580 R-protein L3 B ARABIDOPSIS RIBOSOMAL PROTEIN 2,
R-protein L3 B		 -0.8 0.31 -0.32
17 AT2G36570 Leucine-rich repeat protein kinase family protein -0.8 0.34 -0.32
18 AT5G41560 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin
ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.8 0.31 -0.31
19 AT4G36040 Chaperone DnaJ-domain superfamily protein DnaJ11 0.8 0.33 -0.29
20 AT3G07560 peroxin 13 ABERRANT PEROXISOME MORPHOLOGY 2,
peroxin 13		 0.8 0.32 -0.31
21 AT1G03820 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1345 Blast hits to
1122 proteins in 102 species: Archae - 2; Bacteria - 28;
Metazoa - 28; Fungi - 30; Plants - 109; Viruses - 0; Other
Eukaryotes - 1148 (source: NCBI BLink).		 -0.79 0.32 -0.32
22 AT4G30790 INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Autophagy-related protein 17
(InterPro:IPR007240), Autophagy-related protein 11
(InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins
in 570 species: Archae - 89; Bacteria - 657; Metazoa -
4844; Fungi - 808; Plants - 441; Viruses - 15; Other
Eukaryotes - 1939 (source: NCBI BLink).		 0.79 0.32 -0.31
23 AT3G16785 phospholipase D P1 PHOSPHOLIPASE D ZETA 1,
phospholipase D P1, PHOSPHOLIPASE
D ZETA1, PLDZETA1		 0.79 0.3 -0.34
24 AT5G48800 Phototropic-responsive NPH3 family protein -0.79 0.31 -0.33
25 AT3G53960 Major facilitator superfamily protein 0.79 0.31 -0.32
26 AT5G45900 ThiF family protein AUTOPHAGY 7, ATAPG7, ATATG7,
AUTOPHAGY-RELATED 7		 0.79 0.33 -0.3
27 AT3G49590 Autophagy-related protein 13 autophagy-related 13 0.79 0.3 -0.32
28 AT5G05180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G10880.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.79 0.33 -0.33
29 AT5G44900 Toll-Interleukin-Resistance (TIR) domain family protein -0.78 0.3 -0.29
30 AT1G22650 Plant neutral invertase family protein alkaline/neutral invertase D -0.78 0.29 -0.32
31 AT2G17700 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase 8 0.78 0.32 -0.32
32 AT5G16910 cellulose-synthase like D2 ATCSLD2, cellulose-synthase like
D2		 0.78 0.33 -0.3
33 AT2G15620 nitrite reductase 1 ARABIDOPSIS THALIANA NITRITE
REDUCTASE, NITRITE REDUCTASE,
nitrite reductase 1		 -0.78 0.33 -0.33
34 AT2G39700 expansin A4 ATEXP4, expansin A4, ATHEXP ALPHA
1.6, expansin A4		 -0.78 0.33 -0.33
35 AT4G34370 RING/U-box superfamily protein ARIADNE 1, ARABIDOPSIS ARIADNE 1 0.78 0.33 -0.31
36 AT4G33940 RING/U-box superfamily protein 0.78 0.34 -0.32
37 AT4G30390 unknown protein; Has 22 Blast hits to 22 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.78 0.32 -0.3
38 AT4G22980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9
growth stages; BEST Arabidopsis thaliana protein match is:
Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein (TAIR:AT5G51920.1); Has 520 Blast hits
to 468 proteins in 130 species: Archae - 5; Bacteria - 23;
Metazoa - 99; Fungi - 131; Plants - 231; Viruses - 0; Other
Eukaryotes - 31 (source: NCBI BLink).		 0.78 0.33 -0.34
39 AT1G54710 homolog of yeast autophagy 18 (ATG18) H homolog of yeast autophagy 18
(ATG18) H, homolog of yeast
autophagy 18 (ATG18) H		 0.77 0.31 -0.34
40 AT1G04680 Pectin lyase-like superfamily protein -0.77 0.31 -0.31
41 AT4G05400 copper ion binding -0.77 0.29 -0.32
42 AT1G16520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast
hits to 234 proteins in 69 species: Archae - 2; Bacteria -
2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0;
Other Eukaryotes - 44 (source: NCBI BLink).		 -0.77 0.33 -0.3
43 AT5G60160 Zn-dependent exopeptidases superfamily protein 0.77 0.31 -0.3
44 AT1G20950 Phosphofructokinase family protein -0.77 0.31 -0.34
45 AT5G06370 NC domain-containing protein-related 0.77 0.31 -0.33
46 AT1G01260 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.76 0.31 -0.31
47 AT5G04950 nicotianamine synthase 1 ARABIDOPSIS THALIANA NICOTIANAMINE
SYNTHASE 1, nicotianamine synthase
1		 -0.76 0.32 -0.32
48 AT2G20920 Protein of unknown function (DUF3353) 0.76 0.32 -0.32
49 AT2G26920 Ubiquitin-associated/translation elongation factor EF1B
protein		 0.76 0.33 -0.3
50 AT4G23290 cysteine-rich RLK (RECEPTOR-like protein kinase) 21 cysteine-rich RLK (RECEPTOR-like
protein kinase) 21		 -0.76 0.31 -0.33
51 AT1G72710 casein kinase 1-like protein 2 casein kinase 1-like protein 2 0.76 0.32 -0.33
52 AT1G20880 RNA-binding (RRM/RBD/RNP motifs) family protein 0.76 0.31 -0.31
53 AT3G19170 presequence protease 1 presequence protease 1, ATZNMP,
presequence protease 1		 0.75 0.33 -0.32
54 AT4G18160 Ca2+ activated outward rectifying K+ channel 6 CA2+ ACTIVATED OUTWARD RECTIFYING
K+ CHANNEL 6, ATTPK3, Ca2+
activated outward rectifying K+
channel 6, TPK3		 0.75 0.31 -0.32
55 AT4G30000 Dihydropterin pyrophosphokinase / Dihydropteroate synthase -0.75 0.31 -0.31
56 AT2G38400 alanine:glyoxylate aminotransferase 3 alanine:glyoxylate
aminotransferase 3		 0.75 0.31 -0.33
57 AT2G38050 3-oxo-5-alpha-steroid 4-dehydrogenase family protein ATDET2, DE-ETIOLATED 2, DWARF 6 0.75 0.3 -0.31
58 AT3G44620 protein tyrosine phosphatases;protein tyrosine phosphatases 0.74 0.33 -0.31
59 AT4G39090 Papain family cysteine protease RESPONSIVE TO DEHYDRATION 19,
RESPONSIVE TO DEHYDRATION 19A		 0.74 0.3 -0.31
60 AT2G38810 histone H2A 8 histone H2A 8 -0.74 0.3 -0.34
61 AT4G16740 terpene synthase 03 terpene synthase 03, terpene
synthase 03		 0.74 0.31 -0.31
62 AT3G58670 Protein of unknown function (DUF1637) 0.74 0.31 -0.31
63 AT5G02530 RNA-binding (RRM/RBD/RNP motifs) family protein -0.74 0.3 -0.3
64 AT4G17340 tonoplast intrinsic protein 2;2 DELTA-TIP2, tonoplast intrinsic
protein 2;2		 -0.74 0.32 -0.31
65 AT2G23450 Protein kinase superfamily protein 0.74 0.32 -0.32
66 AT5G16960 Zinc-binding dehydrogenase family protein 0.74 0.33 -0.3
67 AT5G41100 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein
(TAIR:AT3G26910.2); Has 1503 Blast hits to 1197 proteins in
220 species: Archae - 4; Bacteria - 108; Metazoa - 481;
Fungi - 318; Plants - 186; Viruses - 39; Other Eukaryotes -
367 (source: NCBI BLink).		 0.74 0.32 -0.3
68 AT1G19270 DA1 DA1 0.74 0.3 -0.3
69 AT3G62050 Putative endonuclease or glycosyl hydrolase -0.74 0.34 -0.29
70 AT1G51950 indole-3-acetic acid inducible 18 indole-3-acetic acid inducible 18 0.74 0.32 -0.33
71 AT5G25580 BEST Arabidopsis thaliana protein match is: DDT domain
superfamily (TAIR:AT1G18950.1); Has 178 Blast hits to 178
proteins in 75 species: Archae - 0; Bacteria - 4; Metazoa -
51; Fungi - 33; Plants - 60; Viruses - 1; Other Eukaryotes
- 29 (source: NCBI BLink).		 -0.73 0.29 -0.32
72 AT4G08500 MAPK/ERK kinase kinase 1 ARAKIN, ATMEKK1, MAPKKK8, MAPK/ERK
kinase kinase 1		 0.73 0.32 -0.34
73 AT5G66290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 14 plant
structures; EXPRESSED DURING: 7 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.73 0.3 -0.32
74 AT1G75500 Walls Are Thin 1 Walls Are Thin 1 -0.73 0.3 -0.32
75 AT1G29970 60S ribosomal protein L18A-1 60S ribosomal protein L18A-1 0.73 0.32 -0.32
76 AT4G28100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
anchored to plasma membrane, anchored to membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G18050.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.73 0.32 -0.34
77 AT4G18170 WRKY DNA-binding protein 28 ATWRKY28, WRKY DNA-binding protein
28		 0.73 0.31 -0.3
78 AT1G72230 Cupredoxin superfamily protein -0.73 0.31 -0.32
79 AT1G69730 Wall-associated kinase family protein -0.72 0.32 -0.32
80 AT1G65490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 23 Blast hits to 23 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.32 -0.32
81 AT4G09970 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18
plant structures; EXPRESSED DURING: 13 growth stages; Has
15 Blast hits to 15 proteins in 6 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 13; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.3 -0.31
82 AT5G60140 AP2/B3-like transcriptional factor family protein -0.72 0.33 -0.32
83 AT3G11250 Ribosomal protein L10 family protein -0.72 0.3 -0.34
84 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 -0.72 0.32 -0.33
85 AT1G16260 Wall-associated kinase family protein -0.72 0.31 -0.32
86 AT4G28310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.71 0.29 -0.3
87 AT3G06610 DNA-binding enhancer protein-related -0.71 0.31 -0.32
88 AT1G14350 Duplicated homeodomain-like superfamily protein myb domain protein 124, FOUR LIPS,
MYB124		 -0.71 0.33 -0.32
89 AT1G64405 unknown protein; Has 13 Blast hits to 13 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.32 -0.3
90 AT5G46700 Tetraspanin family protein TETRASPANIN 1, TORNADO 2 -0.7 0.33 -0.32
91 AT1G43040 SAUR-like auxin-responsive protein family -0.7 0.29 -0.31
92 AT5G02830 Tetratricopeptide repeat (TPR)-like superfamily protein -0.7 0.32 -0.32
93 AT1G57820 Zinc finger (C3HC4-type RING finger) family protein ORTHRUS 2, VARIANT IN METHYLATION
1		 -0.7 0.32 -0.32
94 AT4G13990 Exostosin family protein -0.7 0.32 -0.32
95 AT5G38690 Zinc-finger domain of monoamine-oxidase A repressor R1
protein		 -0.7 0.3 -0.3
96 AT5G15460 membrane-anchored ubiquitin-fold protein 2 membrane-anchored ubiquitin-fold
protein 2		 -0.7 0.33 -0.32
97 AT3G26320 cytochrome P450, family 71, subfamily B, polypeptide 36 cytochrome P450, family 71,
subfamily B, polypeptide 36		 -0.69 0.32 -0.31
98 AT3G25100 cell division cycle 45 cell division cycle 45 -0.69 0.31 -0.31
99 AT1G33960 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 AVRRPT2-INDUCED GENE 1 -0.68 0.31 -0.32
100 AT4G23300 cysteine-rich RLK (RECEPTOR-like protein kinase) 22 cysteine-rich RLK (RECEPTOR-like
protein kinase) 22		 -0.68 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
101 C0067 Citramalic acid (S)-(+)-, (R)-(-)-Citramalate (S)-Citramalate; (R)-Citramalate - 0.85 0.44 -0.43 C0067
102 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		0.78 0.41 -0.41 C0220