AGICode | AT3G12140 |
Description | Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G12140 | Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein |
AtEML1, EMSY-like 1 | 1 | 0.29 | -0.32 | ||
2 | AT4G31880 | LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast hits to 70781 proteins in 2973 species: Archae - 289; Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants - 6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI BLink). |
0.71 | 0.31 | -0.3 | |||
3 | AT3G57890 | Tubulin binding cofactor C domain-containing protein | 0.66 | 0.3 | -0.29 | |||
4 | AT5G13270 | Pentatricopeptide repeat (PPR) superfamily protein | REQUIRED FOR ACCD RNA EDITING 1 | 0.64 | 0.3 | -0.33 | ||
5 | AT4G17960 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46620.1); Has 46 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.32 | -0.31 | |||
6 | AT1G06230 | global transcription factor group E4 | global transcription factor group E4 |
0.6 | 0.32 | -0.32 | ||
7 | AT1G68580 | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein |
0.6 | 0.31 | -0.32 | |||
8 | AT2G34840 | Coatomer epsilon subunit | -0.59 | 0.32 | -0.31 | |||
9 | AT5G56610 | Phosphotyrosine protein phosphatases superfamily protein | -0.59 | 0.31 | -0.3 | |||
10 | AT2G41630 | transcription factor IIB | transcription factor IIB | 0.59 | 0.32 | -0.34 | ||
11 | AT1G75860 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20100.1); Has 258 Blast hits to 235 proteins in 58 species: Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 16; Plants - 90; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). |
0.59 | 0.3 | -0.32 | |||
12 | AT5G40020 | Pathogenesis-related thaumatin superfamily protein | -0.58 | 0.31 | -0.33 | |||
13 | AT1G71830 | somatic embryogenesis receptor-like kinase 1 | SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1, somatic embryogenesis receptor-like kinase 1 |
0.58 | 0.32 | -0.3 | ||
14 | AT1G63500 | Protein kinase protein with tetratricopeptide repeat domain | 0.58 | 0.29 | -0.32 | |||
15 | AT3G16990 | Haem oxygenase-like, multi-helical | -0.57 | 0.29 | -0.31 | |||
16 | AT5G54520 | Transducin/WD40 repeat-like superfamily protein | -0.57 | 0.3 | -0.32 | |||
17 | AT4G28710 | Myosin family protein with Dil domain | MYOSIN XI H, XIH | -0.57 | 0.33 | -0.3 | ||
18 | AT3G28400 | transposable element gene | -0.57 | 0.33 | -0.33 | |||
19 | AT1G43580 | Sphingomyelin synthetase family protein | -0.57 | 0.34 | -0.33 | |||
20 | AT1G12775 | Pentatricopeptide repeat (PPR) superfamily protein | 0.56 | 0.29 | -0.31 | |||
21 | AT1G76880 | Duplicated homeodomain-like superfamily protein | 0.56 | 0.3 | -0.31 | |||
22 | AT5G13970 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13310.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.56 | 0.3 | -0.33 | |||
23 | AT1G21290 | transposable element gene | 0.56 | 0.32 | -0.31 | |||
24 | AT1G63930 | from the Czech 'roh' meaning 'corner' | from the Czech 'roh' meaning 'corner' |
0.55 | 0.3 | -0.32 | ||
25 | AT1G09680 | Pentatricopeptide repeat (PPR) superfamily protein | 0.55 | 0.32 | -0.32 | |||
26 | AT4G39180 | Sec14p-like phosphatidylinositol transfer family protein | ARABIDOPSIS THALIANA SECRETION 14, SECRETION 14 |
-0.55 | 0.31 | -0.28 | ||
27 | AT3G42360 | transposable element gene | 0.55 | 0.33 | -0.32 | |||
28 | AT1G32840 | transposable element gene | -0.55 | 0.31 | -0.34 | |||
29 | AT2G03630 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits to 126 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). |
-0.55 | 0.32 | -0.33 | |||
30 | AT2G41570 | transposable element gene | -0.55 | 0.32 | -0.32 | |||
31 | AT5G41490 | F-box associated ubiquitination effector family protein | -0.54 | 0.32 | -0.33 | |||
32 | AT5G46150 | LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein |
-0.54 | 0.31 | -0.31 | |||
33 | AT4G09480 | transposable element gene | -0.54 | 0.29 | -0.3 | |||
34 | AT5G49610 | F-box family protein | 0.54 | 0.32 | -0.29 | |||
35 | AT3G28155 | BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G35630.1); Has 19 Blast hits to 19 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.54 | 0.32 | -0.31 | |||
36 | AT5G11910 | alpha/beta-Hydrolases superfamily protein | -0.54 | 0.31 | -0.31 | |||
37 | AT3G27800 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.32 | -0.33 | |||
38 | AT1G14680 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09060.1); Has 8132 Blast hits to 6366 proteins in 685 species: Archae - 171; Bacteria - 671; Metazoa - 4046; Fungi - 445; Plants - 318; Viruses - 23; Other Eukaryotes - 2458 (source: NCBI BLink). |
0.54 | 0.29 | -0.3 | |||
39 | AT1G68700 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26140.1); Has 14 Blast hits to 14 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.31 | -0.34 | |||
40 | AT3G46910 | Cullin family protein | -0.53 | 0.3 | -0.31 | |||
41 | AT2G04370 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.3 | -0.31 | |||
42 | AT1G73440 | calmodulin-related | -0.53 | 0.31 | -0.3 | |||
43 | AT1G16980 | trehalose-phosphatase/synthase 2 | trehalose-phosphatase/synthase 2, TREHALOSE -6-PHOSPHATASE SYNTHASE S2, trehalose-phosphatase/synthase 2 |
-0.52 | 0.31 | -0.32 | ||
44 | AT4G37900 | Protein of unknown function (duplicated DUF1399) | -0.51 | 0.3 | -0.31 | |||
45 | AT5G39030 | Protein kinase superfamily protein | -0.5 | 0.32 | -0.29 | |||
46 | AT5G19200 | NAD(P)-binding Rossmann-fold superfamily protein | TSC10B | -0.5 | 0.29 | -0.32 | ||
47 | AT4G31615 | Transcriptional factor B3 family protein | -0.5 | 0.33 | -0.32 | |||
48 | AT1G70840 | MLP-like protein 31 | MLP-like protein 31 | -0.5 | 0.31 | -0.34 | ||
49 | AT1G11880 | transferases, transferring hexosyl groups | -0.49 | 0.33 | -0.32 | |||
50 | AT3G43170 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT5G54330.1); Has 90 Blast hits to 90 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.49 | 0.33 | -0.31 | |||
51 | AT4G01960 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits to 67 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.49 | 0.32 | -0.31 | |||
52 | AT4G15250 | B-box type zinc finger protein with CCT domain | -0.49 | 0.33 | -0.34 | |||
53 | AT3G10990 | F-box associated ubiquitination effector family protein | -0.48 | 0.32 | -0.31 | |||
54 | AT2G16960 | ARM repeat superfamily protein | -0.47 | 0.3 | -0.34 | |||
55 | AT4G18230 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharide biosynthesis protein Alg14 like (InterPro:IPR013969); Has 640 Blast hits to 640 proteins in 277 species: Archae - 4; Bacteria - 281; Metazoa - 94; Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). |
-0.47 | 0.31 | -0.31 | |||
56 | AT4G28900 | transposable element gene | -0.47 | 0.33 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
57 | C0053 | ADP | - | ADP | phosphatidylcholine biosynthesis I, mannitol degradation II, lipid IVA biosynthesis, stachyose degradation, Rubisco shunt, copper transport II, glycerol degradation IV, chorismate biosynthesis, folate polyglutamylation II, galactose degradation III, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, UDP-L-arabinose biosynthesis II (from L-arabinose), cadmium transport I, folate polyglutamylation, coenzyme A biosynthesis, sulfate activation for sulfonation, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), pyrimidine deoxyribonucleotides de novo biosynthesis I, galactose degradation II, inosine-5'-phosphate biosynthesis II, ribose degradation, acetyl-CoA biosynthesis (from citrate), inositol pyrophosphates biosynthesis, fatty acid biosynthesis initiation I, xylose degradation I, adenine and adenosine salvage VI, TCA cycle variation III (eukaryotic), tetrahydrofolate biosynthesis II, phosphatidylethanolamine biosynthesis II, pyridoxal 5'-phosphate salvage pathway, citrulline biosynthesis, trans-zeatin biosynthesis, glutamine biosynthesis I, arginine biosynthesis II (acetyl cycle), L-Ndelta-acetylornithine biosynthesis, mevalonate pathway I, methionine biosynthesis II, trehalose degradation II (trehalase), citrulline degradation, methionine salvage pathway, TCA cycle variation V (plant), chlorophyllide a biosynthesis I, starch degradation I, methylerythritol phosphate pathway, pyridine nucleotide cycling (plants), ceramide degradation, biotin-carboxyl carrier protein assembly, purine nucleotide metabolism (phosphotransfer and nucleotide modification), UDP-D-galacturonate biosynthesis II (from D-galacturonate), asparagine biosynthesis III (tRNA-dependent), superpathway of glyoxylate cycle and fatty acid degradation, NAD/NADH phosphorylation and dephosphorylation, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3), galactose degradation I (Leloir pathway), uridine-5'-phosphate biosynthesis, lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3), sucrose degradation III, lysine biosynthesis VI, sphingolipid biosynthesis (plants), choline biosynthesis I, GDP-glucose biosynthesis, photorespiration, gamma-glutamyl cycle (plant pathway), 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, thiamine biosynthesis II, proline biosynthesis III, glutathione biosynthesis, folate transformations II, ornithine biosynthesis, diphthamide biosynthesis, S-methyl-5'-thioadenosine degradation I, starch biosynthesis, arginine biosynthesis I, homoserine biosynthesis, flavin biosynthesis I (bacteria and plants), sucrose biosynthesis I, leucine degradation I, glycolysis I, pyrimidine ribonucleotides interconversion, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza), glycolysis IV (plant cytosol), Calvin-Benson-Bassham cycle, UDP-D-glucuronate biosynthesis (from myo-inositol), guanine and guanosine salvage III, glutamine biosynthesis III, L-glutamine biosynthesis II (tRNA-dependent), GDP-L-fucose biosynthesis II (from L-fucose), nitrate reduction II (assimilatory), ammonia assimilation cycle II, gluconeogenesis I, threonine biosynthesis from homoserine, mannose degradation, urea cycle, lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3), biotin biosynthesis II |
-0.67 | 0.44 | -0.45 | ||
58 | C0124 | Isonicotinic acid | - | - | - | 0.63 | 0.45 | -0.45 |