AGICode | AT3G06260 |
Description | galacturonosyltransferase-like 4 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G06260 | galacturonosyltransferase-like 4 | galacturonosyltransferase-like 4, galactinol synthase 9 |
1 | 0.31 | -0.32 | ||
2 | AT5G19660 | SITE-1 protease | SITE-1 PROTEASE, ATSBT6.1, SITE-1 protease |
0.62 | 0.3 | -0.31 | ||
3 | AT4G28900 | transposable element gene | 0.62 | 0.29 | -0.3 | |||
4 | AT5G49190 | sucrose synthase 2 | ATSUS2, SUCROSE SYNTHASE FROM ARABIDOPSIS, sucrose synthase 2 |
-0.58 | 0.33 | -0.32 | ||
5 | AT1G35663 | transposable element gene | -0.58 | 0.31 | -0.32 | |||
6 | AT5G66420 | CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.57 | 0.32 | -0.31 | |||
7 | AT2G47830 | Cation efflux family protein | 0.57 | 0.32 | -0.32 | |||
8 | AT1G05900 | endonuclease III 2 | ATNTH2, endonuclease III 2 | 0.57 | 0.34 | -0.33 | ||
9 | AT2G13350 | Calcium-dependent lipid-binding (CaLB domain) family protein |
0.56 | 0.34 | -0.31 | |||
10 | AT1G05410 | Protein of unknown function (DUF1423) | -0.56 | 0.31 | -0.31 | |||
11 | AT4G03850 | transposable element gene | -0.56 | 0.28 | -0.31 | |||
12 | AT4G10440 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.55 | 0.28 | -0.32 | |||
13 | AT1G22080 | Cysteine proteinases superfamily protein | 0.55 | 0.28 | -0.31 | |||
14 | AT5G59650 | Leucine-rich repeat protein kinase family protein | 0.55 | 0.31 | -0.33 | |||
15 | AT4G16820 | alpha/beta-Hydrolases superfamily protein | phospholipase A I beta 2 | 0.54 | 0.3 | -0.31 | ||
16 | AT4G04280 | transposable element gene | -0.54 | 0.32 | -0.32 | |||
17 | AT3G43690 | transposable element gene | 0.54 | 0.32 | -0.31 | |||
18 | AT3G27800 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.54 | 0.32 | -0.33 | |||
19 | AT3G06290 | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | AtSAC3B, yeast Sac3 homolog B | 0.53 | 0.32 | -0.32 | ||
20 | AT5G40250 | RING/U-box superfamily protein | -0.52 | 0.31 | -0.31 | |||
21 | AT1G57830 | Toll-Interleukin-Resistance (TIR) domain family protein | 0.52 | 0.32 | -0.33 | |||
22 | AT5G27800 | Class II aminoacyl-tRNA and biotin synthetases superfamily protein |
-0.51 | 0.3 | -0.34 | |||
23 | AT3G20180 | Copper transport protein family | 0.51 | 0.3 | -0.31 | |||
24 | AT4G28560 | ROP-interactive CRIB motif-containing protein 7 | ROP-interactive CRIB motif-containing protein 7 |
-0.51 | 0.32 | -0.32 | ||
25 | AT4G13240 | RHO guanyl-nucleotide exchange factor 9 | ATROPGEF9, RHO guanyl-nucleotide exchange factor 9 |
0.51 | 0.3 | -0.3 | ||
26 | AT3G42300 | transposable element gene | 0.51 | 0.32 | -0.33 | |||
27 | AT3G11440 | myb domain protein 65 | MYB DOMAIN PROTEIN 65, myb domain protein 65 |
0.51 | 0.33 | -0.3 | ||
28 | AT1G01450 | Protein kinase superfamily protein | 0.51 | 0.34 | -0.33 | |||
29 | AT2G35570 | pseudogene, serpin (serine protease inhibitor) family, similar to phloem serpin-1 (Cucurbita maxima) GI:9937311; blastp match of 49% identity and 9.9e-85 P-value to GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein {Citrus x paradisi} |
0.5 | 0.31 | -0.32 | |||
30 | AT1G61720 | NAD(P)-binding Rossmann-fold superfamily protein | BANYULS | 0.49 | 0.3 | -0.3 | ||
31 | AT1G18030 | Protein phosphatase 2C family protein | 0.49 | 0.29 | -0.32 | |||
32 | AT1G66450 | Cysteine/Histidine-rich C1 domain family protein | -0.48 | 0.3 | -0.3 | |||
33 | AT5G03590 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.48 | 0.33 | -0.32 | |||
34 | AT2G26135 | RING/U-box protein with C6HC-type zinc finger | -0.48 | 0.33 | -0.3 | |||
35 | AT5G52130 | unknown protein; Has 10 Blast hits to 10 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.48 | 0.32 | -0.34 | |||
36 | AT5G42230 | serine carboxypeptidase-like 41 | serine carboxypeptidase-like 41 | 0.46 | 0.33 | -0.32 | ||
37 | AT1G62670 | rna processing factor 2 | rna processing factor 2 | 0.46 | 0.31 | -0.3 | ||
38 | AT3G43020 | transposable element gene | -0.46 | 0.31 | -0.31 | |||
39 | AT2G15540 | transposable element gene | -0.45 | 0.31 | -0.32 | |||
40 | AT5G28890 | transposable element gene | -0.45 | 0.32 | -0.32 | |||
41 | AT5G26130 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
-0.45 | 0.32 | -0.33 | |||
42 | AT5G41490 | F-box associated ubiquitination effector family protein | 0.44 | 0.3 | -0.32 | |||
43 | AT2G01840 | transposable element gene | -0.44 | 0.32 | -0.31 | |||
44 | AT2G40530 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, inflorescence meristem, petal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.44 | 0.29 | -0.29 | |||
45 | AT2G30300 | Major facilitator superfamily protein | 0.44 | 0.32 | -0.32 | |||
46 | AT4G16470 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.44 | 0.31 | -0.3 | |||
47 | AT4G16640 | Matrixin family protein | 0.44 | 0.32 | -0.32 | |||
48 | AT1G41860 | transposable element gene | -0.42 | 0.32 | -0.32 | |||
49 | AT5G54095 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.41 | 0.29 | -0.31 | |||
50 | AT3G13965 | pseudogene, hypothetical protein | -0.4 | 0.32 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
51 | C0234 | Sinapoyl glucose | 1-O-Sinapoyl-β-D-glucose | 1-O-Sinapoyl-β-D-glucose | sinapate ester biosynthesis | 0.73 | 0.45 | -0.44 | ||
52 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
0.72 | 0.46 | -0.44 | ||
53 | C0011 | N-Acetyl-glutamic acid | N-Acetyl-D,L-glutamic acid | N-Acetyl-L-glutamate | arginine biosynthesis II (acetyl cycle), ornithine biosynthesis |
0.68 | 0.45 | -0.45 | ||
54 | C0087 | Erythrose-4-phosphate | D-Erythrose-4-phosphate | D-Erythrose-4-phosphate | Rubisco shunt, pentose phosphate pathway (non-oxidative branch), chorismate biosynthesis, Calvin-Benson-Bassham cycle |
0.67 | 0.43 | -0.44 | ||
55 | C0030 | 3-Methylsulfinyl-n-propylglucosinolate | - | 3-Methylsulfinylpropyl-glucosinolate | glucosinolate biosynthesis from homomethionine | 0.66 | 0.45 | -0.46 | ||
56 | C0195 | Phenylpyruvic acid | - | Phenylpyruvate | phenylalanine degradation III | 0.61 | 0.45 | -0.45 | ||
57 | C0181 | MST_2904.3 | - | - | - | -0.6 | 0.43 | -0.45 |