AGICode | AT3G06290 |
Description | SAC3/GANP/Nin1/mts3/eIF-3 p25 family |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G06290 | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | AtSAC3B, yeast Sac3 homolog B | 1 | 0.3 | -0.31 | ||
2 | AT5G66320 | GATA transcription factor 5 | GATA transcription factor 5 | 0.67 | 0.31 | -0.3 | ||
3 | AT3G26560 | ATP-dependent RNA helicase, putative | 0.67 | 0.31 | -0.31 | |||
4 | AT3G48710 | DEK domain-containing chromatin associated protein | 0.67 | 0.34 | -0.32 | |||
5 | AT3G45420 | Concanavalin A-like lectin protein kinase family protein | 0.64 | 0.33 | -0.31 | |||
6 | AT1G13950 | eukaryotic elongation factor 5A-1 | EUKARYOTIC ELONGATION FACTOR 5A-1, EIF-5A, EUKARYOTIC ELONGATION FACTOR 5A, eukaryotic elongation factor 5A-1 |
-0.64 | 0.31 | -0.32 | ||
7 | AT2G46560 | transducin family protein / WD-40 repeat family protein | 0.64 | 0.31 | -0.31 | |||
8 | AT2G14380 | transposable element gene | -0.63 | 0.32 | -0.32 | |||
9 | AT3G57300 | INO80 ortholog | INO80 ORTHOLOG, INO80 ortholog | 0.63 | 0.33 | -0.32 | ||
10 | AT3G12370 | Ribosomal protein L10 family protein | -0.63 | 0.31 | -0.31 | |||
11 | AT5G24080 | Protein kinase superfamily protein | 0.62 | 0.3 | -0.31 | |||
12 | AT5G38070 | RING/FYVE/PHD zinc finger superfamily protein | 0.62 | 0.32 | -0.32 | |||
13 | AT1G14210 | Ribonuclease T2 family protein | -0.62 | 0.31 | -0.33 | |||
14 | AT5G02260 | expansin A9 | ATEXP9, expansin A9, ATHEXP ALPHA 1.10, EXP9, expansin A9 |
-0.61 | 0.33 | -0.31 | ||
15 | AT2G23630 | SKU5 similar 16 | SKU5 similar 16 | -0.61 | 0.32 | -0.31 | ||
16 | AT1G35430 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09170.1); Has 23 Blast hits to 23 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.32 | -0.33 | |||
17 | AT2G47830 | Cation efflux family protein | 0.61 | 0.29 | -0.3 | |||
18 | AT2G26240 | Transmembrane proteins 14C | -0.61 | 0.31 | -0.34 | |||
19 | AT1G22310 | methyl-CPG-binding domain 8 | ATMBD8, methyl-CPG-binding domain 8 |
0.61 | 0.31 | -0.32 | ||
20 | AT5G59880 | actin depolymerizing factor 3 | actin depolymerizing factor 3 | -0.6 | 0.3 | -0.35 | ||
21 | AT4G13980 | winged-helix DNA-binding transcription factor family protein |
AT-HSFA5, HEAT SHOCK TRANSCRIPTION FACTOR A5 |
0.6 | 0.32 | -0.3 | ||
22 | AT1G55970 | histone acetyltransferase of the CBP family 4 | HAC04, histone acetyltransferase of the CBP family 4, HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 6, HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 04, HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 4 |
0.6 | 0.31 | -0.31 | ||
23 | AT3G04390 | Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein |
0.6 | 0.32 | -0.33 | |||
24 | AT1G21580 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.6 | 0.29 | -0.29 | |||
25 | AT4G03170 | AP2/B3-like transcriptional factor family protein | -0.59 | 0.31 | -0.31 | |||
26 | AT5G20800 | transposable element gene | 0.59 | 0.34 | -0.33 | |||
27 | AT3G16050 | pyridoxine biosynthesis 1.2 | A37, ARABIDOPSIS THALIANA PYRIDOXINE BIOSYNTHESIS 1.2, pyridoxine biosynthesis 1.2 |
-0.59 | 0.32 | -0.3 | ||
28 | AT1G22860 | Vacuolar sorting protein 39 | 0.59 | 0.3 | -0.31 | |||
29 | AT2G35910 | RING/U-box superfamily protein | -0.59 | 0.32 | -0.3 | |||
30 | AT3G17920 | Outer arm dynein light chain 1 protein | 0.59 | 0.32 | -0.32 | |||
31 | AT1G23240 | Caleosin-related family protein | -0.59 | 0.32 | -0.31 | |||
32 | AT2G31110 | Plant protein of unknown function (DUF828) | TRICHOME BIREFRINGENCE-LIKE 40 | -0.58 | 0.31 | -0.34 | ||
33 | AT2G42640 | Mitogen activated protein kinase kinase kinase-related | 0.58 | 0.3 | -0.31 | |||
34 | AT3G10660 | calmodulin-domain protein kinase cdpk isoform 2 | ATCPK2, calmodulin-domain protein kinase cdpk isoform 2 |
-0.58 | 0.31 | -0.31 | ||
35 | AT4G35780 | ACT-like protein tyrosine kinase family protein | serine/threonine/tyrosine kinase 17 |
0.58 | 0.31 | -0.34 | ||
36 | AT2G03150 | ATP/GTP-binding protein family | embryo defective 1579 | 0.58 | 0.31 | -0.34 | ||
37 | AT4G38920 | vacuolar-type H(+)-ATPase C3 | vacuolar-type H(+)-ATPase C3, AVA-P3, vacuolar-type H(+)-ATPase C3 |
-0.58 | 0.31 | -0.31 | ||
38 | AT4G31020 | alpha/beta-Hydrolases superfamily protein | -0.57 | 0.31 | -0.31 | |||
39 | AT1G14660 | Na+/H+ exchanger 8 | Na+/H+ exchanger 8, Na+/H+ exchanger 8, SODIUM HYDROGEN EXCHANGER 8 |
0.57 | 0.31 | -0.31 | ||
40 | AT5G13890 | Family of unknown function (DUF716) | -0.57 | 0.31 | -0.31 | |||
41 | AT1G05410 | Protein of unknown function (DUF1423) | -0.56 | 0.31 | -0.3 | |||
42 | AT2G17710 | unknown protein; Has 39 Blast hits to 39 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.3 | -0.33 | |||
43 | AT1G15750 | Transducin family protein / WD-40 repeat family protein | TOPLESS, WUS-INTERACTING PROTEIN 1 | 0.55 | 0.31 | -0.31 | ||
44 | AT5G22720 | F-box/RNI-like superfamily protein | 0.55 | 0.32 | -0.32 | |||
45 | AT4G02720 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF926 (InterPro:IPR009269); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.55 | 0.33 | -0.3 | |||
46 | AT4G31615 | Transcriptional factor B3 family protein | 0.55 | 0.32 | -0.3 | |||
47 | AT1G68100 | ZIP metal ion transporter family | IAA-ALANINE RESISTANT 1 | -0.54 | 0.31 | -0.29 | ||
48 | AT5G16270 | sister chromatid cohesion 1 protein 4 | ARABIDOPSIS HOMOLOG OF RAD21 3, sister chromatid cohesion 1 protein 4 |
0.54 | 0.34 | -0.33 | ||
49 | AT3G12360 | Ankyrin repeat family protein | INCREASED TOLERANCE TO NACL | 0.54 | 0.3 | -0.31 | ||
50 | AT3G57170 | N-acetylglucosaminyl transferase component family protein / Gpi1 family protein |
0.54 | 0.33 | -0.31 | |||
51 | AT4G16900 | Disease resistance protein (TIR-NBS-LRR class) family | 0.53 | 0.32 | -0.36 | |||
52 | AT3G06260 | galacturonosyltransferase-like 4 | galacturonosyltransferase-like 4, galactinol synthase 9 |
0.53 | 0.33 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
53 | C0011 | N-Acetyl-glutamic acid | N-Acetyl-D,L-glutamic acid | N-Acetyl-L-glutamate | arginine biosynthesis II (acetyl cycle), ornithine biosynthesis |
0.7 | 0.46 | -0.47 | ||
54 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | 0.69 | 0.47 | -0.45 | ||
55 | C0109 | Guanine | - | Guanine | guanine and guanosine salvage II, guanosine nucleotides degradation II |
0.69 | 0.45 | -0.47 | ||
56 | C0005 | β-Fructose-6-phosphate | β-D-Fructose-6-phosphate | D-Fructose-6-phosphate | starch biosynthesis, Rubisco shunt, Calvin-Benson-Bassham cycle, mannitol degradation II, ascorbate biosynthesis I (L-galactose pathway), UDP-N-acetyl-D-glucosamine biosynthesis II, GDP-mannose biosynthesis, mannose degradation, sucrose biosynthesis I, sucrose degradation III, glycolysis IV (plant cytosol), pentose phosphate pathway (non-oxidative branch), glycolysis I, superpathway of sucrose and starch metabolism II (photosynthetic tissue), D-mannose degradation, gluconeogenesis I |
0.6 | 0.33 | -0.32 | ||
57 | C0013 | N2-Acetyl-Ornithine | N2-Acetyl-L-ornithine | N-acetyl-L-ornithine | arginine biosynthesis II (acetyl cycle), ornithine biosynthesis |
0.54 | 0.31 | -0.29 |