AGICode | AT1G66620 |
Description | Protein with RING/U-box and TRAF-like domains |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G66620 | Protein with RING/U-box and TRAF-like domains | 1 | 0.34 | -0.3 | |||
2 | AT1G64190 | 6-phosphogluconate dehydrogenase family protein | 0.81 | 0.33 | -0.31 | |||
3 | AT1G59960 | NAD(P)-linked oxidoreductase superfamily protein | 0.78 | 0.31 | -0.32 | |||
4 | AT5G38630 | cytochrome B561-1 | cytochrome B561-1, cytochrome B561-1 |
0.76 | 0.33 | -0.32 | ||
5 | AT5G15980 | Pentatricopeptide repeat (PPR) superfamily protein | 0.76 | 0.32 | -0.32 | |||
6 | AT5G49840 | ATP-dependent Clp protease | -0.74 | 0.3 | -0.33 | |||
7 | AT5G27990 | Pre-rRNA-processing protein TSR2, conserved region | 0.74 | 0.32 | -0.31 | |||
8 | AT5G02100 | Oxysterol-binding family protein | OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3A, UNFERTILIZED EMBRYO SAC 18 |
0.74 | 0.32 | -0.31 | ||
9 | AT1G61870 | pentatricopeptide repeat 336 | pentatricopeptide repeat 336 | 0.73 | 0.32 | -0.32 | ||
10 | AT1G64490 | DEK, chromatin associated protein | 0.73 | 0.32 | -0.32 | |||
11 | AT3G08020 | PHD finger family protein | -0.72 | 0.32 | -0.31 | |||
12 | AT1G65290 | mitochondrial acyl carrier protein 2 | mitochondrial acyl carrier protein 2 |
0.71 | 0.32 | -0.3 | ||
13 | AT4G33360 | NAD(P)-binding Rossmann-fold superfamily protein | farnesol dehydrogenase | 0.71 | 0.32 | -0.32 | ||
14 | AT3G53880 | NAD(P)-linked oxidoreductase superfamily protein | Aldo-keto reductase family 4 member C11 |
0.7 | 0.31 | -0.32 | ||
15 | AT5G05890 | UDP-Glycosyltransferase superfamily protein | 0.7 | 0.32 | -0.29 | |||
16 | AT1G43170 | ribosomal protein 1 | ribosomal protein 1, embryo defective 2207, ribosomal protein 1, RPL3A |
0.7 | 0.3 | -0.31 | ||
17 | AT4G22720 | Actin-like ATPase superfamily protein | 0.7 | 0.31 | -0.33 | |||
18 | AT3G55170 | Ribosomal L29 family protein | 0.69 | 0.32 | -0.33 | |||
19 | AT5G02310 | proteolysis 6 | proteolysis 6 | -0.69 | 0.33 | -0.33 | ||
20 | AT4G27270 | Quinone reductase family protein | 0.69 | 0.28 | -0.32 | |||
21 | AT5G60950 | COBRA-like protein 5 precursor | COBRA-like protein 5 precursor | 0.68 | 0.32 | -0.3 | ||
22 | AT4G35850 | Pentatricopeptide repeat (PPR) superfamily protein | 0.68 | 0.33 | -0.3 | |||
23 | AT3G42680 | transposable element gene | 0.68 | 0.33 | -0.31 | |||
24 | ATCG00530 | CemA-like proton extrusion protein-related | YCF10 | -0.67 | 0.29 | -0.31 | ||
25 | AT1G74030 | enolase 1 | enolase 1 | 0.67 | 0.33 | -0.31 | ||
26 | AT4G13050 | Acyl-ACP thioesterase | 0.67 | 0.31 | -0.32 | |||
27 | AT5G15360 | unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.66 | 0.29 | -0.31 | |||
28 | AT1G47250 | 20S proteasome alpha subunit F2 | 20S proteasome alpha subunit F2 | 0.66 | 0.31 | -0.32 | ||
29 | AT1G78970 | lupeol synthase 1 | ARABIDOPSIS THALIANA LUPEOL SYNTHASE 1, lupeol synthase 1 |
0.66 | 0.34 | -0.3 | ||
30 | AT3G57300 | INO80 ortholog | INO80 ORTHOLOG, INO80 ortholog | -0.65 | 0.33 | -0.32 | ||
31 | AT1G68760 | nudix hydrolase 1 | ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 1, nudix hydrolase 1, nudix hydrolase 1, NUDIX HYDROLASE 1 |
-0.65 | 0.32 | -0.31 | ||
32 | AT1G48840 | Plant protein of unknown function (DUF639) | -0.65 | 0.31 | -0.32 | |||
33 | AT4G09150 | T-complex protein 11 | -0.64 | 0.32 | -0.31 | |||
34 | AT1G52760 | lysophospholipase 2 | lysophospholipase 2 | 0.64 | 0.32 | -0.31 | ||
35 | AT3G17920 | Outer arm dynein light chain 1 protein | -0.64 | 0.31 | -0.34 | |||
36 | AT1G65370 | TRAF-like family protein | 0.64 | 0.31 | -0.31 | |||
37 | AT1G63880 | Disease resistance protein (TIR-NBS-LRR class) family | 0.63 | 0.3 | -0.31 | |||
38 | AT5G64060 | NAC domain containing protein 103 | NAC domain containing protein 103, NAC domain containing protein 103 |
0.63 | 0.31 | -0.31 | ||
39 | AT1G20050 | C-8,7 sterol isomerase | HYDRA1 | 0.63 | 0.31 | -0.3 | ||
40 | AT5G22450 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.63 | 0.32 | -0.31 | |||
41 | AT1G61730 | DNA-binding storekeeper protein-related transcriptional regulator |
0.63 | 0.32 | -0.31 | |||
42 | AT5G20300 | Avirulence induced gene (AIG1) family protein | translocon at the outer envelope membrane of chloroplasts 90 |
-0.63 | 0.31 | -0.32 | ||
43 | AT5G08565 | Transcription initiation Spt4-like protein | 0.63 | 0.33 | -0.31 | |||
44 | ATCG00690 | photosystem II reaction center protein T | photosystem II reaction center protein T, PSBTC |
-0.63 | 0.33 | -0.32 | ||
45 | AT5G13640 | phospholipid:diacylglycerol acyltransferase | ARABIDOPSIS THALIANA PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE, phospholipid:diacylglycerol acyltransferase, PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 1 |
-0.62 | 0.31 | -0.31 | ||
46 | AT1G67550 | urease | urease | 0.62 | 0.32 | -0.31 | ||
47 | ATCG00520 | unfolded protein binding | YCF4 | -0.62 | 0.3 | -0.3 | ||
48 | AT3G54230 | suppressor of abi3-5 | suppressor of abi3-5 | -0.62 | 0.31 | -0.31 | ||
49 | AT1G59900 | pyruvate dehydrogenase complex E1 alpha subunit | pyruvate dehydrogenase complex E1 alpha subunit, pyruvate dehydrogenase complex E1 alpha subunit |
0.62 | 0.3 | -0.33 | ||
50 | AT1G75310 | auxin-like 1 protein | auxilin-like 1 | -0.62 | 0.32 | -0.29 | ||
51 | AT1G13950 | eukaryotic elongation factor 5A-1 | EUKARYOTIC ELONGATION FACTOR 5A-1, EIF-5A, EUKARYOTIC ELONGATION FACTOR 5A, eukaryotic elongation factor 5A-1 |
0.62 | 0.31 | -0.33 | ||
52 | AT1G52260 | PDI-like 1-5 | ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 3, PDI-like 1-5, PROTEIN DISULFIDE ISOMERASE 3, PDI-like 1-5 |
0.62 | 0.3 | -0.3 | ||
53 | AT4G01790 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.61 | 0.32 | -0.31 | |||
54 | AT5G35730 | EXS (ERD1/XPR1/SYG1) family protein | 0.61 | 0.32 | -0.32 | |||
55 | ATCG00510 | photsystem I subunit I | photsystem I subunit I | -0.61 | 0.31 | -0.32 | ||
56 | AT1G03210 | Phenazine biosynthesis PhzC/PhzF protein | 0.61 | 0.3 | -0.31 | |||
57 | AT5G35450 | Disease resistance protein (CC-NBS-LRR class) family | 0.61 | 0.32 | -0.33 | |||
58 | AT4G25100 | Fe superoxide dismutase 1 | ARABIDOPSIS FE SUPEROXIDE DISMUTASE 1, Fe superoxide dismutase 1 |
0.61 | 0.34 | -0.3 | ||
59 | AT5G05760 | syntaxin of plants 31 | ATSED5, ATSYP31, T-SNARE SED 5, syntaxin of plants 31 |
0.61 | 0.32 | -0.29 | ||
60 | AT1G80970 | XH domain-containing protein | 0.61 | 0.32 | -0.32 | |||
61 | AT4G11110 | SPA1-related 2 | SPA1-related 2 | -0.6 | 0.35 | -0.33 | ||
62 | AT1G58150 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 9 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.33 | -0.32 | |||
63 | AT4G35780 | ACT-like protein tyrosine kinase family protein | serine/threonine/tyrosine kinase 17 |
-0.6 | 0.31 | -0.32 | ||
64 | AT1G62830 | LSD1-like 1 | ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE, ATSWP1, LSD1-like 1, LYSINE-SPECIFIC HISTONE DEMETHYLASE, SWP1 |
0.6 | 0.33 | -0.31 | ||
65 | AT5G17880 | disease resistance protein (TIR-NBS-LRR class) | constitutive shade-avoidance1 | 0.6 | 0.34 | -0.31 | ||
66 | AT2G24520 | H(+)-ATPase 5 | H(+)-ATPase 5, H(+)-ATPase 5 | -0.6 | 0.33 | -0.33 | ||
67 | AT4G27820 | beta glucosidase 9 | beta glucosidase 9 | -0.59 | 0.28 | -0.31 | ||
68 | AT1G79890 | RAD3-like DNA-binding helicase protein | 0.59 | 0.31 | -0.31 | |||
69 | AT4G32760 | ENTH/VHS/GAT family protein | -0.59 | 0.3 | -0.32 | |||
70 | AT1G74320 | Protein kinase superfamily protein | 0.59 | 0.32 | -0.32 | |||
71 | AT5G08600 | U3 ribonucleoprotein (Utp) family protein | 0.59 | 0.31 | -0.31 | |||
72 | AT2G03150 | ATP/GTP-binding protein family | embryo defective 1579 | -0.59 | 0.31 | -0.32 | ||
73 | AT4G05460 | RNI-like superfamily protein | 0.59 | 0.31 | -0.32 | |||
74 | AT4G25520 | SEUSS-like 1 | SEUSS-like 1 | -0.59 | 0.31 | -0.31 | ||
75 | AT5G55170 | small ubiquitin-like modifier 3 | ATSUMO3, SMALL UBIQUITIN-LIKE MODIFIER 3, SMALL UBIQUITIN-LIKE MODIFIER 3, small ubiquitin-like modifier 3 |
0.59 | 0.31 | -0.33 | ||
76 | AT1G65280 | DNAJ heat shock N-terminal domain-containing protein | 0.59 | 0.32 | -0.3 | |||
77 | AT3G05670 | RING/U-box protein | -0.59 | 0.33 | -0.32 | |||
78 | AT5G37180 | sucrose synthase 5 | ARABIDOPSIS THALIANA SUCROSE SYNTHASE 5, sucrose synthase 5 |
-0.58 | 0.31 | -0.31 | ||
79 | AT4G35230 | BR-signaling kinase 1 | BR-signaling kinase 1 | -0.58 | 0.31 | -0.33 | ||
80 | AT4G28260 | unknown protein; Has 50 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.33 | -0.3 | |||
81 | AT5G36250 | Protein phosphatase 2C family protein | -0.58 | 0.3 | -0.3 | |||
82 | AT3G20880 | WIP domain protein 4 | WIP domain protein 4 | 0.58 | 0.32 | -0.29 | ||
83 | AT5G40950 | ribosomal protein large subunit 27 | ribosomal protein large subunit 27 | 0.57 | 0.31 | -0.32 | ||
84 | AT4G02450 | HSP20-like chaperones superfamily protein | 0.57 | 0.3 | -0.31 | |||
85 | AT4G19240 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43280.1); Has 19 Blast hits to 17 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.33 | -0.32 | |||
86 | ATCG00120 | ATP synthase subunit alpha | ATP synthase subunit alpha | -0.57 | 0.32 | -0.3 | ||
87 | AT1G68490 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.31 | -0.34 | |||
88 | AT5G37290 | ARM repeat superfamily protein | 0.57 | 0.33 | -0.32 | |||
89 | AT1G63540 | hydroxyproline-rich glycoprotein family protein | -0.57 | 0.32 | -0.33 | |||
90 | ATCG00380 | chloroplast ribosomal protein S4 | chloroplast ribosomal protein S4 | -0.57 | 0.32 | -0.29 | ||
91 | AT2G02570 | nucleic acid binding;RNA binding | -0.56 | 0.31 | -0.31 | |||
92 | AT1G49950 | telomere repeat binding factor 1 | TELOMERE REPEAT BINDING FACTOR 1, telomere repeat binding factor 1 |
0.56 | 0.32 | -0.31 | ||
93 | AT3G17750 | Protein kinase superfamily protein | -0.56 | 0.35 | -0.33 | |||
94 | AT1G64270 | transposable element gene | 0.56 | 0.32 | -0.3 | |||
95 | AT4G27050 | F-box/RNI-like superfamily protein | -0.56 | 0.33 | -0.3 | |||
96 | AT1G01440 | Protein of unknown function (DUF3133) | -0.56 | 0.32 | -0.32 | |||
97 | AT1G59970 | Matrixin family protein | 0.56 | 0.3 | -0.31 | |||
98 | AT5G25170 | PPPDE putative thiol peptidase family protein | 0.56 | 0.31 | -0.32 | |||
99 | AT2G01720 | Ribophorin I | 0.56 | 0.32 | -0.32 | |||
100 | AT5G38220 | alpha/beta-Hydrolases superfamily protein | -0.55 | 0.32 | -0.29 | |||
101 | AT3G27530 | golgin candidate 6 | golgin candidate 6, MAIGO 4 | -0.55 | 0.3 | -0.31 | ||
102 | AT4G26630 | DEK domain-containing chromatin associated protein | -0.55 | 0.33 | -0.31 | |||
103 | AT5G13950 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 147 Blast hits to 145 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 56; Fungi - 6; Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.54 | 0.33 | -0.32 | |||
104 | AT4G22280 | F-box/RNI-like superfamily protein | -0.54 | 0.32 | -0.3 | |||
105 | AT5G28030 | L-cysteine desulfhydrase 1 | L-cysteine desulfhydrase 1 | -0.54 | 0.29 | -0.3 | ||
106 | AT3G53720 | cation/H+ exchanger 20 | cation/H+ exchanger 20, cation/H+ exchanger 20 |
-0.53 | 0.33 | -0.32 | ||
107 | AT1G50290 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.53 | 0.32 | -0.32 | |||
108 | ATCG01070 | NADH-ubiquinone/plastoquinone oxidoreductase chain 4L | NDHE | -0.53 | 0.31 | -0.33 | ||
109 | AT5G10490 | MSCS-like 2 | MSCS-like 2 | -0.53 | 0.32 | -0.31 | ||
110 | AT1G20390 | transposable element gene | -0.52 | 0.32 | -0.3 | |||
111 | AT4G35240 | Protein of unknown function (DUF630 and DUF632) | -0.52 | 0.31 | -0.33 | |||
112 | AT5G13300 | ARF GTPase-activating protein | ARF-GAP DOMAIN3, SCARFACE, ASCULAR NETWORK DEFECTIVE 3 |
-0.52 | 0.31 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
113 | C0178 | MST_2446.7 | - | - | - | -0.8 | 0.45 | -0.45 | ||
114 | C0074 | Cystine | L-Cystine | L-Cystine | protein precursor | -0.74 | 0.43 | -0.43 | ||
115 | C0174 | MST_2370.2 | - | - | - | -0.7 | 0.42 | -0.45 | ||
116 | C0233 | Sinapinic acid | - | cis-Sinapinate; Sinapate | ferulate and sinapate biosynthesis, sinapate ester biosynthesis, free phenylpropanoid acid biosynthesis |
-0.7 | 0.47 | -0.43 | ||
117 | C0244 | Sucrose | D-Sucrose | Sucrose | stachyose biosynthesis, fructan degradation, stachyose degradation, galactose degradation III, superpathway of sucrose and starch metabolism II (photosynthetic tissue), sucrose degradation III, UDP-glucose biosynthesis (from sucrose), ajugose biosynthesis II (galactinol-independent), sucrose biosynthesis I |
0.66 | 0.32 | -0.32 | ||
118 | C0240 | Stigmasterol | - | Stigmasterol | plant sterol biosynthesis | -0.63 | 0.44 | -0.46 | ||
119 | C0034 | 4-Methylthio-n-butylglucosinolate | - | 4-Methylthiobutyl glucosinolate | glucosinolate biosynthesis from dihomomethionine | 0.61 | 0.33 | -0.33 |