AT3G28200 : -
Query Information
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AGICode AT3G28200
Description Peroxidase superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G28200 Peroxidase superfamily protein 1 0.33 -0.33
2 AT3G22300 ribosomal protein S10 ribosomal protein S10 0.83 0.3 -0.3
3 AT1G76160 SKU5 similar 5 SKU5 similar 5 0.81 0.31 -0.3
4 AT3G19130 RNA-binding protein 47B RNA-binding protein 47B,
RNA-binding protein 47B		 0.81 0.34 -0.32
5 AT2G30050 transducin family protein / WD-40 repeat family protein 0.81 0.32 -0.33
6 AT5G11010 Pre-mRNA cleavage complex II protein family 0.8 0.31 -0.31
7 AT4G26210 Mitochondrial ATP synthase subunit G protein 0.79 0.3 -0.31
8 AT2G43770 Transducin/WD40 repeat-like superfamily protein 0.78 0.31 -0.29
9 AT3G10090 Nucleic acid-binding, OB-fold-like protein 0.78 0.29 -0.31
10 AT4G31130 Protein of unknown function (DUF1218) 0.78 0.3 -0.32
11 AT3G11800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.78 0.32 -0.31
12 AT5G57370 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1777 (InterPro:IPR013957); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.78 0.3 -0.32
13 AT1G11680 CYTOCHROME P450 51G1 CYTOCHROME P450 51, CYTOCHROME
P450 51A2, CYTOCHROME P450 51G1,
embryo defective 1738		 0.77 0.31 -0.32
14 AT5G11760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1764, eukaryotic (InterPro:IPR013885);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.77 0.31 -0.32
15 AT5G49720 glycosyl hydrolase 9A1 glycosyl hydrolase 9A1, DEFECTIVE
CYTOKINESIS, glycosyl hydrolase
9A1, IRREGULAR XYLEM 2, KORRIGAN,
KORRIGAN 1, RADIALLY SWOLLEN 2,
TUMOROUS SHOOT DEVELOPMENT 1		 0.77 0.31 -0.28
16 AT5G60920 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA 0.77 0.3 -0.3
17 AT1G26750 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.77 0.32 -0.32
18 AT1G66070 Translation initiation factor eIF3 subunit 0.76 0.34 -0.32
19 AT5G18520 Lung seven transmembrane receptor family protein 0.76 0.3 -0.31
20 AT5G59880 actin depolymerizing factor 3 actin depolymerizing factor 3 0.76 0.31 -0.31
21 AT3G11410 protein phosphatase 2CA AHG3, ARABIDOPSIS THALIANA PROTEIN
PHOSPHATASE 2CA, protein
phosphatase 2CA		 -0.76 0.31 -0.31
22 AT1G71400 receptor like protein 12 receptor like protein 12, receptor
like protein 12		 0.75 0.31 -0.28
23 AT4G25260 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.75 0.31 -0.3
24 AT4G29390 Ribosomal protein S30 family protein 0.74 0.3 -0.33
25 AT1G13870 calmodulin binding;purine nucleotide binding AtKTI12, DEFORMED ROOTS AND LEAVES
1		 0.74 0.32 -0.31
26 AT1G01910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.74 0.31 -0.31
27 AT4G28540 casein kinase I-like 6 casein kinase I-like 6, PAPK1 0.74 0.32 -0.31
28 AT1G08930 Major facilitator superfamily protein EARLY RESPONSE TO DEHYDRATION 6 0.73 0.33 -0.32
29 AT4G34450 coatomer gamma-2 subunit, putative / gamma-2 coat protein,
putative / gamma-2 COP, putative		 0.73 0.34 -0.33
30 AT1G14830 DYNAMIN-like 1C DYNAMIN-like 1C, ARABIDOPSIS
DYNAMIN-LIKE PROTEIN 5,
DYNAMIN-like 1C, DYNAMIN RELATED
PROTEIN 1C		 0.73 0.31 -0.31
31 AT3G53520 UDP-glucuronic acid decarboxylase 1 ATUXS1, UDP-glucuronic acid
decarboxylase 1		 0.73 0.32 -0.31
32 AT5G16470 zinc finger (C2H2 type) family protein 0.73 0.32 -0.33
33 AT5G13780 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.73 0.33 -0.29
34 AT2G38310 PYR1-like 4 PYR1-like 4, regulatory components
of ABA receptor 10		 0.73 0.31 -0.31
35 AT4G39920 C-CAP/cofactor C-like domain-containing protein PORCINO, TUBULIN-FOLDING COFACTOR
C		 0.73 0.31 -0.33
36 AT1G24600 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67920.1); Has 18 Blast hits
to 18 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.31 -0.31
37 AT1G19520 pentatricopeptide (PPR) repeat-containing protein NUCLEAR FUSION DEFECTIVE 5 0.72 0.31 -0.28
38 AT4G26430 COP9 signalosome subunit 6B COP9 signalosome subunit 6B 0.72 0.32 -0.31
39 AT2G24765 ADP-ribosylation factor 3 ADP-ribosylation factor 3,
ARF-LIKE 1, ARF-LIKE 1		 0.72 0.31 -0.33
40 AT4G09570 calcium-dependent protein kinase 4 ATCPK4, calcium-dependent protein
kinase 4		 0.72 0.32 -0.28
41 AT4G31080 Protein of unknown function (DUF2296) 0.72 0.31 -0.32
42 AT1G51540 Galactose oxidase/kelch repeat superfamily protein 0.72 0.32 -0.33
43 AT1G22530 PATELLIN 2 PATELLIN 2 0.72 0.33 -0.34
44 AT5G65430 general regulatory factor 8 14-3-3 PROTEIN G-BOX FACTOR14
KAPPA, GF14 KAPPA, general
regulatory factor 8		 0.72 0.33 -0.34
45 AT5G43840 heat shock transcription factor A6A heat shock transcription factor
A6A, heat shock transcription
factor A6A		 -0.72 0.32 -0.32
46 AT5G19680 Leucine-rich repeat (LRR) family protein 0.72 0.32 -0.31
47 AT5G14105 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.72 0.32 -0.3
48 AT2G47770 TSPO(outer membrane tryptophan-rich sensory
protein)-related		 TSPO(outer membrane
tryptophan-rich sensory
protein)-related, TSPO(outer
membrane tryptophan-rich sensory
protein)-related		 -0.72 0.3 -0.29
49 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 -0.72 0.3 -0.33
50 AT5G10940 transducin family protein / WD-40 repeat family protein ALTERED SEED GERMINATION 2 -0.72 0.31 -0.31
51 AT3G04780 Protein of unknown function (DUF1000) 0.71 0.31 -0.33
52 AT1G52730 Transducin/WD40 repeat-like superfamily protein 0.71 0.32 -0.34
53 AT4G08460 Protein of unknown function (DUF1644) 0.71 0.34 -0.34
54 AT5G05440 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 PYRABACTIN RESISTANCE 1-LIKE 5,
regulatory component of ABA
receptor 8		 0.71 0.3 -0.31
55 AT5G05920 deoxyhypusine synthase deoxyhypusine synthase, embryo sac
development arrest 22		 0.71 0.31 -0.33
56 AT4G39220 Rer1 family protein ATRER1A 0.71 0.33 -0.32
57 AT4G31080 Protein of unknown function (DUF2296) 0.71 0.31 -0.32
58 AT1G62380 ACC oxidase 2 ACC oxidase 2, ATACO2 0.71 0.31 -0.32
59 AT2G20585 nuclear fusion defective 6 NUCLEAR FUSION DEFECTIVE 6 0.71 0.34 -0.31
60 AT5G18280 apyrase 2 apyrase 2, apyrase 2 0.71 0.29 -0.3
61 AT5G67220 FMN-linked oxidoreductases superfamily protein 0.71 0.31 -0.32
62 AT1G05810 RAB GTPase homolog A5E ARA, ARA-1, ATRAB11D, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A5E,
RAB GTPase homolog A5E		 0.71 0.33 -0.32
63 AT4G01220 Nucleotide-diphospho-sugar transferase family protein male gametophyte defective 4 0.71 0.29 -0.3
64 AT5G14250 Proteasome component (PCI) domain protein CONSTITUTIVE PHOTOMORPHOGENIC 13,
COP9 SIGNALOSOME SUBUNIT 3, FUSCA
11		 0.71 0.32 -0.32
65 AT5G25220 KNOTTED1-like homeobox gene 3 KNOTTED1-like homeobox gene 3 -0.7 0.31 -0.31
66 AT3G58450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.7 0.31 -0.33
67 AT4G34000 abscisic acid responsive elements-binding factor 3 abscisic acid responsive
elements-binding factor 3, AtABF3,
DC3 PROMOTER-BINDING FACTOR 5		 -0.7 0.33 -0.33
68 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein -0.69 0.31 -0.31
69 AT4G01280 Homeodomain-like superfamily protein -0.69 0.31 -0.3
70 AT5G16490 ROP-interactive CRIB motif-containing protein 4 ROP-interactive CRIB
motif-containing protein 4		 -0.69 0.31 -0.32
71 AT1G08040 Protein of unknown function (DUF707) -0.69 0.32 -0.32
72 AT2G18440 GUT15 (GENE WITH UNSTABLE TRANSCRIPT 15); other RNA GENE WITH UNSTABLE TRANSCRIPT 15 -0.68 0.31 -0.32
73 AT5G63560 HXXXD-type acyl-transferase family protein -0.68 0.3 -0.31
74 AT3G13784 cell wall invertase 5 cell wall invertase 5, cell wall
invertase 5		 -0.68 0.32 -0.3
75 AT5G10930 CBL-interacting protein kinase 5 CBL-interacting protein kinase 5,
SNF1-RELATED PROTEIN KINASE 3.24		 -0.67 0.32 -0.3
76 AT3G24790 Protein kinase superfamily protein -0.67 0.31 -0.31
77 AT4G04750 Major facilitator superfamily protein -0.66 0.31 -0.33
78 AT2G25690 Protein of unknown function (DUF581) -0.66 0.31 -0.31
79 AT5G56520 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G55365.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.66 0.32 -0.33
80 AT4G04150 transposable element gene -0.66 0.35 -0.31
81 AT5G01880 RING/U-box superfamily protein -0.66 0.33 -0.3
82 AT2G19550 alpha/beta-Hydrolases superfamily protein -0.66 0.31 -0.3
83 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 -0.66 0.33 -0.35
84 AT4G05100 myb domain protein 74 myb domain protein 74, myb domain
protein 74		 -0.66 0.32 -0.3
85 AT1G57943 purine permease 17 purine permease 17, purine
permease 17		 -0.65 0.31 -0.3
86 AT4G04970 glucan synthase-like 1 GLUCAN SYNTHASE LIKE 1, GLUCAN
SYNTHASE LIKE-1, GSL01, glucan
synthase-like 1		 -0.65 0.3 -0.33
87 AT3G55850 Amidohydrolase family LONG AFTER FAR-RED 3, LONG AFTER
FAR-RED 3 ISOFORM 1, LAF3 ISOFORM
2		 -0.65 0.29 -0.33
88 AT5G08430 SWIB/MDM2 domain;Plus-3;GYF -0.64 0.31 -0.35
89 AT2G17975 zinc finger (Ran-binding) family protein -0.64 0.33 -0.34
90 AT4G08980 F-BOX WITH WD-40 2 F-BOX WITH WD-40 2 -0.64 0.29 -0.32
91 AT1G80800 pseudogene, 40S ribosomal protein S12 (RPS12B), similar to
ribosomal protein S12 GB:AAD39838 GI:5106775 from (Hordeum
vulgare); blastp match of 65% identity and 4.7e-12 P-value
to GP|23617253|dbj|BAC20920.1||AP005764 putative 40S
ribosomal protein S12 {Oryza sativa (japonica
cultivar-group)}		 -0.64 0.33 -0.32
92 AT3G45420 Concanavalin A-like lectin protein kinase family protein -0.64 0.31 -0.33
93 AT1G12880 nudix hydrolase homolog 12 nudix hydrolase homolog 12, nudix
hydrolase homolog 12		 -0.64 0.32 -0.3
94 AT4G21550 VP1/ABI3-like 3 VP1/ABI3-like 3 -0.63 0.32 -0.3
95 AT5G40640 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
19 plant structures; EXPRESSED DURING: 7 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G27390.1); Has 104 Blast hits to 102 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi -
0; Plants - 101; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.63 0.29 -0.31
96 AT3G12720 myb domain protein 67 myb domain protein 67, ATY53,
MYB67, myb domain protein 67		 -0.63 0.31 -0.32
97 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 -0.63 0.32 -0.31
98 AT1G14660 Na+/H+ exchanger 8 Na+/H+ exchanger 8, Na+/H+
exchanger 8, SODIUM HYDROGEN
EXCHANGER 8		 -0.63 0.33 -0.3
99 AT1G02960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02965.1); Has 83 Blast hits
to 82 proteins in 37 species: Archae - 0; Bacteria - 2;
Metazoa - 20; Fungi - 7; Plants - 29; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 -0.63 0.3 -0.28
100 AT5G24750 UDP-Glycosyltransferase superfamily protein -0.63 0.31 -0.31
101 AT5G62800 Protein with RING/U-box and TRAF-like domains -0.63 0.29 -0.31
102 AT1G53100 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.63 0.33 -0.3
103 AT5G65480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G38060.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.33 -0.31
104 AT5G22720 F-box/RNI-like superfamily protein -0.62 0.31 -0.31
105 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.61 0.32 -0.33
106 AT5G64530 xylem NAC domain 1 Arabidopsis NAC domain containing
protein 104, xylem NAC domain 1		 -0.61 0.31 -0.31
107 AT5G45610 protein dimerizations SENSITIVE TO UV 2 -0.61 0.31 -0.28
108 AT1G47280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 6 Blast hits to 6
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.61 0.32 -0.32
109 AT4G03205 Coproporphyrinogen III oxidase hemf2 -0.61 0.3 -0.3
110 AT3G22490 Seed maturation protein -0.61 0.31 -0.3
111 AT1G21580 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.61 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
112 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		-0.84 0.46 -0.43 C0109
113 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		-0.81 0.42 -0.47 C0010
114 C0239 Spermidine - Spermidine spermine biosynthesis,
spermine and spermidine degradation III,
beta-alanine biosynthesis I,
hypusine biosynthesis,
spermidine hydroxycinnamic acid conjugates biosynthesis,
spermidine biosynthesis I 		0.72 0.42 -0.45 C0239
115 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.7 0.45 -0.44 C0107
116 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.68 0.45 -0.46 C0032
117 C0030 3-Methylsulfinyl-n-propylglucosinolate - 3-Methylsulfinylpropyl-glucosinolate glucosinolate biosynthesis from homomethionine -0.67 0.44 -0.44 C0030
118 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) -0.66 0.3 -0.33 C0142
119 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) -0.66 0.45 -0.44 C0099
120 C0005 β-Fructose-6-phosphate β-D-Fructose-6-phosphate D-Fructose-6-phosphate starch biosynthesis,
Rubisco shunt,
Calvin-Benson-Bassham cycle,
mannitol degradation II,
ascorbate biosynthesis I (L-galactose pathway),
UDP-N-acetyl-D-glucosamine biosynthesis II,
GDP-mannose biosynthesis,
mannose degradation,
sucrose biosynthesis I,
sucrose degradation III,
glycolysis IV (plant cytosol),
pentose phosphate pathway (non-oxidative branch),
glycolysis I,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
D-mannose degradation,
gluconeogenesis I 		-0.62 0.29 -0.3 C0005
121 C0009 myo-Inositol - myo-Inositol stachyose biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
D-myo-inositol (1,4,5)-trisphosphate degradation,
galactosylcyclitol biosynthesis,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
phytate degradation I,
myo-inositol biosynthesis,
ajugose biosynthesis I (galactinol-dependent),
phospholipid biosynthesis II 		-0.62 0.45 -0.5 C0009
122 C0097 Glucosamine-6-phosphate D-Glucosamine-6-phosphate D-Glucosamine-6-phosphate UDP-N-acetyl-D-glucosamine biosynthesis II -0.62 0.31 -0.31 C0097