AT3G13470 : chaperonin-60beta2
Query Information
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AGICode AT3G13470
Description TCP-1/cpn60 chaperonin family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G13470 TCP-1/cpn60 chaperonin family protein chaperonin-60beta2 1 0.31 -0.32
2 AT1G56050 GTP-binding protein-related 0.94 0.31 -0.33
3 AT3G04650 FAD/NAD(P)-binding oxidoreductase family protein 0.93 0.3 -0.31
4 AT1G55490 chaperonin 60 beta chaperonin 60 beta,
chaperonin-60beta1, LESION
INITIATION 1		 0.91 0.28 -0.32
5 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 0.91 0.32 -0.33
6 AT1G06190 Rho termination factor 0.9 0.34 -0.3
7 AT2G41950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 53
Blast hits to 53 proteins in 24 species: Archae - 0;
Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.9 0.33 -0.34
8 AT2G14880 SWIB/MDM2 domain superfamily protein 0.9 0.3 -0.3
9 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.9 0.31 -0.32
10 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 0.89 0.31 -0.31
11 AT1G48460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.89 0.34 -0.31
12 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.89 0.29 -0.32
13 AT4G38970 fructose-bisphosphate aldolase 2 fructose-bisphosphate aldolase 2 0.88 0.32 -0.31
14 AT4G28660 photosystem II reaction center PSB28 protein photosystem II reaction center
PSB28 protein		 0.87 0.31 -0.32
15 AT3G53460 chloroplast RNA-binding protein 29 chloroplast RNA-binding protein 29 0.87 0.31 -0.32
16 AT3G10520 haemoglobin 2 haemoglobin 2, ARATH GLB2,
ARABIDOPSIS HEMOGLOBIN 2,
HEMOGLOBIN 2, haemoglobin 2,
NON-SYMBIOTIC HAEMOGLOBIN 2		 0.87 0.28 -0.33
17 AT1G72610 germin-like protein 1 A. THALIANA GERMIN-LIKE PROTEIN 1,
germin-like protein 1, GERMIN-LIKE
PROTEIN 1		 0.87 0.3 -0.34
18 AT5G07900 Mitochondrial transcription termination factor family
protein		 0.87 0.33 -0.31
19 AT2G33180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57
proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa -
0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes -
14 (source: NCBI BLink).		 0.87 0.32 -0.31
20 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein 0.87 0.31 -0.31
21 AT1G21600 plastid transcriptionally active 6 plastid transcriptionally active 6 0.87 0.32 -0.31
22 AT5G49330 myb domain protein 111 ARABIDOPSIS MYB DOMAIN PROTEIN
111, myb domain protein 111,
PRODUCTION OF FLAVONOL GLYCOSIDES
3		 0.87 0.32 -0.3
23 AT3G06980 DEA(D/H)-box RNA helicase family protein 0.87 0.31 -0.31
24 AT4G25990 CCT motif family protein CIL 0.87 0.29 -0.31
25 AT3G57180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 BRASSINAZOLE(BRZ) INSENSITIVE PALE
GREEN 2		 0.86 0.32 -0.3
26 AT1G26570 UDP-glucose dehydrogenase 1 UDP-GLUCOSE DEHYDROGENASE 1,
UDP-glucose dehydrogenase 1		 0.86 0.33 -0.29
27 AT1G10510 RNI-like superfamily protein embryo defective 2004 0.86 0.3 -0.31
28 AT1G11430 plastid developmental protein DAG, putative 0.86 0.31 -0.32
29 AT5G23310 Fe superoxide dismutase 3 Fe superoxide dismutase 3 0.86 0.34 -0.36
30 AT3G21300 RNA methyltransferase family protein 0.86 0.32 -0.32
31 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein 0.86 0.31 -0.32
32 AT5G64580 AAA-type ATPase family protein EMBRYO DEFECTIVE 3144 0.86 0.33 -0.31
33 AT2G21385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.86 0.32 -0.33
34 AT3G58610 ketol-acid reductoisomerase 0.85 0.31 -0.3
35 AT1G60000 RNA-binding (RRM/RBD/RNP motifs) family protein 0.85 0.31 -0.31
36 AT1G52080 actin binding protein family AR791 -0.85 0.31 -0.32
37 AT2G39670 Radical SAM superfamily protein 0.85 0.32 -0.33
38 AT5G54080 homogentisate 1,2-dioxygenase homogentisate 1,2-dioxygenase -0.85 0.31 -0.3
39 AT5G24020 septum site-determining protein (MIND) ACCUMULATION AND REPLICATION OF
CHLOROPLASTS 11, ATMIND1, MIND		 0.85 0.33 -0.31
40 AT5G41050 Pollen Ole e 1 allergen and extensin family protein 0.85 0.32 -0.33
41 AT2G43630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast, nucleus, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: glycine-rich protein (TAIR:AT3G59640.2); Has 67
Blast hits to 67 proteins in 20 species: Archae - 0;
Bacteria - 4; Metazoa - 9; Fungi - 1; Plants - 49; Viruses
- 2; Other Eukaryotes - 2 (source: NCBI BLink).		 0.85 0.31 -0.32
42 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein 0.85 0.31 -0.33
43 AT1G60230 Radical SAM superfamily protein 0.85 0.31 -0.3
44 AT5G48630 Cyclin family protein 0.85 0.31 -0.32
45 AT4G16390 pentatricopeptide (PPR) repeat-containing protein suppressor of variegation 7 0.85 0.32 -0.3
46 AT5G09240 ssDNA-binding transcriptional regulator 0.85 0.3 -0.3
47 AT2G17972 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 14 growth stages;
Has 34 Blast hits to 34 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.85 0.3 -0.33
48 AT5G63050 embryo defective 2759 embryo defective 2759 0.85 0.32 -0.31
49 AT2G23670 homolog of Synechocystis YCF37 homolog of Synechocystis YCF37 0.85 0.31 -0.32
50 AT5G11270 overexpressor of cationic peroxidase 3 overexpressor of cationic
peroxidase 3		 0.85 0.32 -0.32
51 AT5G20630 germin 3 ARABIDOPSIS THALIANA GERMIN 3,
germin 3, GERMIN-LIKE PROTEIN 3,
GLP3A, GLP3B		 0.85 0.32 -0.3
52 AT1G08640 Chloroplast J-like domain 1 Chloroplast J-like domain 1 0.85 0.32 -0.31
53 AT3G15850 fatty acid desaturase 5 ADS3, fatty acid desaturase 5,
FATTY ACID DESATURASE B, JB67		 0.84 0.29 -0.3
54 AT1G09200 Histone superfamily protein 0.84 0.31 -0.33
55 AT3G48610 non-specific phospholipase C6 non-specific phospholipase C6 0.84 0.32 -0.3
56 AT3G06770 Pectin lyase-like superfamily protein 0.84 0.33 -0.3
57 AT1G33810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 39 Blast hits to 39 proteins
in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.84 0.3 -0.31
58 AT1G18090 5'-3' exonuclease family protein 0.84 0.29 -0.29
59 AT2G02740 ssDNA-binding transcriptional regulator A. THALIANA WHIRLY 3, PLASTID
TRANSCRIPTIONALLY ACTIVE11, WHIRLY
3		 0.84 0.3 -0.32
60 AT3G60245 Zinc-binding ribosomal protein family protein 0.84 0.3 -0.31
61 AT2G47840 Uncharacterised conserved protein ycf60 translocon at the inner envelope
membrane of chloroplasts 20-II,
translocon at the inner envelope
membrane of chloroplasts 20-II		 0.84 0.33 -0.32
62 AT5G61000 Replication factor-A protein 1-related ATRPA70D, RPA70D 0.84 0.31 -0.31
63 AT2G10940 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.84 0.35 -0.33
64 AT3G49670 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 2 0.83 0.31 -0.33
65 AT5G64816 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.83 0.29 -0.33
66 AT4G38100 unknown protein; LOCATED IN: chloroplast thylakoid
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G01150.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.83 0.33 -0.32
67 AT2G36230 Aldolase-type TIM barrel family protein ALBINO AND PALE GREEN 10, HISN3 0.83 0.31 -0.31
68 AT1G09830 Glycinamide ribonucleotide (GAR) synthetase 0.83 0.32 -0.3
69 AT3G54750 unknown protein; Has 145 Blast hits to 145 proteins in 60
species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.83 0.31 -0.32
70 AT2G31170 Cysteinyl-tRNA synthetase, class Ia family protein FIONA, cysteinyl t-RNA synthetase 0.83 0.3 -0.31
71 AT3G59980 Nucleic acid-binding, OB-fold-like protein 0.83 0.33 -0.34
72 AT4G24175 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0307
(InterPro:IPR006839); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.83 0.31 -0.32
73 AT2G43710 Plant stearoyl-acyl-carrier-protein desaturase family
protein		 FATTY ACID BIOSYNTHESIS 2,
suppressor of SA insensitive 2		 0.83 0.32 -0.32
74 AT5G08400 Protein of unknown function (DUF3531) 0.83 0.3 -0.32
75 AT5G39980 Tetratricopeptide repeat (TPR)-like superfamily protein 0.83 0.32 -0.32
76 AT5G59500 protein C-terminal S-isoprenylcysteine carboxyl
O-methyltransferases		 0.82 0.33 -0.31
77 AT3G22960 Pyruvate kinase family protein PKP-ALPHA, PLASTIDIAL PYRUVATE
KINASE 1		 0.82 0.3 -0.3
78 AT1G63680 acid-amino acid ligases;ligases;ATP binding;ATP
binding;ligases		 ALBINO OR PALE-GREEN 13, ATMURE,
MURE, PIGMENT DEFECTIVE EMBRYO 316		 0.82 0.3 -0.31
79 AT2G47240 AMP-dependent synthetase and ligase family protein ECERIFERUM 8, LONG-CHAIN ACYL-COA
SYNTHASE 1		 0.82 0.29 -0.3
80 AT3G54090 fructokinase-like 1 fructokinase-like 1 0.82 0.34 -0.31
81 AT1G16790 ribosomal protein-related 0.82 0.32 -0.33
82 AT5G55580 Mitochondrial transcription termination factor family
protein		 0.82 0.29 -0.29
83 AT3G03310 lecithin:cholesterol acyltransferase 3 ARABIDOPSIS LECITHIN:CHOLESTEROL
ACYLTRANSFERASE 3,
lecithin:cholesterol
acyltransferase 3		 -0.81 0.3 -0.31
84 AT1G65430 IBR domain-containing protein ARIADNE 8, ARABIDOPSIS ARIADNE 8 -0.8 0.32 -0.31
85 AT2G26300 G protein alpha subunit 1 ARABIDOPSIS THALIANA G PROTEIN
ALPHA SUBUNIT 1, G protein alpha
subunit 1, G PROTEIN ALPHA SUBUNIT
1		 -0.8 0.33 -0.31
86 AT2G18480 Major facilitator superfamily protein -0.79 0.32 -0.31
87 AT3G56310 Melibiase family protein -0.79 0.3 -0.33
88 AT1G77000 RNI-like superfamily protein ARABIDOPSIS HOMOLOG OF HOMOLOG OF
HUMAN SKP2 2, SKP2B		 -0.78 0.31 -0.3
89 AT3G51000 alpha/beta-Hydrolases superfamily protein -0.77 0.31 -0.3
90 AT4G29950 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.77 0.33 -0.31
91 AT1G58030 cationic amino acid transporter 2 cationic amino acid transporter 2 -0.76 0.33 -0.33
92 AT4G10050 esterase/lipase/thioesterase family protein -0.76 0.34 -0.33
93 AT4G24400 CBL-interacting protein kinase 8 ATCIPK8, CBL-interacting protein
kinase 8, PROTEIN KINASE 11,
SNF1-RELATED PROTEIN KINASE 3.13		 -0.76 0.32 -0.32
94 AT1G08460 histone deacetylase 8 ATHDA8, histone deacetylase 8,
HISTONE DEACETYLASE 8		 -0.75 0.31 -0.3
95 AT1G18270 ketose-bisphosphate aldolase class-II family protein -0.75 0.32 -0.32
96 AT3G51130 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0183
(InterPro:IPR005373); Has 269 Blast hits to 265 proteins in
123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi
- 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19
(source: NCBI BLink).		 -0.75 0.31 -0.32
97 AT3G09770 RING/U-box superfamily protein LOSS OF GDU 2 -0.75 0.32 -0.33
98 AT1G23040 hydroxyproline-rich glycoprotein family protein -0.74 0.31 -0.32
99 AT2G31945 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G05575.1); Has 61 Blast hits
to 61 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.74 0.32 -0.33
100 AT2G16720 myb domain protein 7 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 7, ATY49, myb domain
protein 7		 -0.74 0.3 -0.32
101 AT5G49710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.73 0.33 -0.32
102 AT5G40690 CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site
(InterPro:IPR018247); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G41730.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.73 0.31 -0.31
103 AT5G64370 beta-ureidopropionase beta-ureidopropionase, PYRIMIDINE
3		 -0.73 0.34 -0.33
104 AT2G40110 Yippee family putative zinc-binding protein -0.73 0.34 -0.31
105 AT3G45300 isovaleryl-CoA-dehydrogenase ATIVD,
isovaleryl-CoA-dehydrogenase,
ISOVALERYL-COA-DEHYDROGENASE		 -0.72 0.29 -0.32
106 AT5G62530 aldehyde dehydrogenase 12A1 aldehyde dehydrogenase 12A1,
ARABIDOPSIS THALIANA
DELTA1-PYRROLINE-5-CARBOXYLATE
DEHYDROGENASE,
DELTA1-PYRROLINE-5-CARBOXYLATE
DEHYDROGENASE		 -0.72 0.31 -0.31
107 AT4G16110 response regulator 2 response regulator 2, response
regulator 2		 -0.71 0.32 -0.33
108 AT2G03850 Late embryogenesis abundant protein (LEA) family protein -0.7 0.31 -0.3
109 AT1G55920 serine acetyltransferase 2;1 serine acetyltransferase 2;1,
SERINE ACETYLTRANSFERASE 1, SERINE
ACETYLTRANSFERASE 5, serine
acetyltransferase 2;1		 -0.7 0.32 -0.33
110 AT4G31290 ChaC-like family protein -0.7 0.3 -0.33
111 AT5G60890 myb domain protein 34 ATMYB34, ALTERED TRYPTOPHAN
REGULATION 1, myb domain protein
34		 -0.7 0.3 -0.31
112 AT4G27260 Auxin-responsive GH3 family protein GH3.5, WES1 -0.7 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
113 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		-0.83 0.45 -0.43 C0220
114 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.79 0.45 -0.46 C0120
115 C0026 2-Hydroxyisobutyric acid - - β oxidation -0.73 0.43 -0.46
116 C0260 Tyrosine L-(-)-Tyrosine L-Tyrosine tyrosine biosynthesis II,
4-hydroxyphenylpyruvate biosynthesis,
tyrosine degradation I,
tyrosine biosynthesis I,
tRNA charging,
hydroxycinnamic acid tyramine amides biosynthesis 		-0.7 0.34 -0.31 C0260