AT3G25840 : -
Query Information
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AGICode AT3G25840
Description Protein kinase superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G25840 Protein kinase superfamily protein 1 0.32 -0.32
2 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 0.73 0.3 -0.32
3 AT2G25760 Protein kinase family protein 0.72 0.32 -0.32
4 AT1G01770 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1446 (InterPro:IPR010839); Has 1597
Blast hits to 1509 proteins in 306 species: Archae - 4;
Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31;
Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink).		 0.71 0.31 -0.32
5 AT3G28560 BCS1 AAA-type ATPase -0.7 0.31 -0.3
6 AT3G22170 far-red elongated hypocotyls 3 far-red elongated hypocotyls 3 0.7 0.32 -0.32
7 AT1G26900 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.31 -0.32
8 AT5G15020 SIN3-like 2 SIN3-like 2 0.69 0.3 -0.32
9 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 0.67 0.31 -0.3
10 AT4G22250 RING/U-box superfamily protein -0.67 0.3 -0.32
11 AT5G56290 peroxin 5 ARABIDOPSIS PEROXIN 5, EMBRYO
DEFECTIVE 2790, peroxin 5		 0.66 0.31 -0.3
12 AT5G24010 Protein kinase superfamily protein 0.66 0.31 -0.32
13 AT2G20980 minichromosome maintenance 10 minichromosome maintenance 10 -0.65 0.31 -0.33
14 AT5G13520 peptidase M1 family protein -0.65 0.3 -0.32
15 AT2G35670 VEFS-Box of polycomb protein FERTILIZATION-INDEPENDENT
ENDOSPERM 2, FERTILIZATION
INDEPENDENT SEED 2		 0.65 0.32 -0.31
16 AT5G61140 U5 small nuclear ribonucleoprotein helicase 0.64 0.33 -0.3
17 AT1G24330 ARM repeat superfamily protein 0.64 0.34 -0.33
18 AT4G29800 PATATIN-like protein 8 PLA IVD, PATATIN-like protein 8 -0.64 0.32 -0.3
19 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.63 0.34 -0.3
20 AT2G23900 Pectin lyase-like superfamily protein -0.63 0.31 -0.31
21 AT1G22620 Phosphoinositide phosphatase family protein suppressor of actin 1 0.63 0.32 -0.31
22 AT3G06370 sodium hydrogen exchanger 4 ATNHX4, sodium hydrogen exchanger
4		 -0.63 0.31 -0.32
23 AT3G42070 transposable element gene 0.62 0.33 -0.32
24 AT4G33730 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.62 0.32 -0.31
25 AT1G16010 magnesium transporter 2 AtMGT2, AtMRS2-1, magnesium
transporter 2, MRS2-1		 0.62 0.31 -0.32
26 AT4G22940 Protein kinase superfamily protein 0.61 0.32 -0.3
27 AT3G03160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.32 -0.29
28 AT1G34330 pseudogene, putative peroxidase, similar to anionic
peroxidase GI:559235 from (Petroselinum crispum); blastp
match of 35% identity and 2.3e-53 P-value to
GP|21426121|gb|AAM52318.1|AC105363_7|AC105363 Putative
peroxidase {Oryza sativa (japonica cultivar-group)}		 -0.61 0.3 -0.33
29 AT4G22640 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.61 0.31 -0.34
30 AT4G19440 Tetratricopeptide repeat (TPR)-like superfamily protein 0.61 0.3 -0.29
31 AT2G33020 receptor like protein 24 receptor like protein 24, receptor
like protein 24		 0.61 0.33 -0.3
32 AT5G63990 Inositol monophosphatase family protein -0.61 0.31 -0.33
33 AT2G17560 high mobility group B4 high mobility group B4, NFD04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D4		 -0.61 0.33 -0.3
34 AT2G35690 acyl-CoA oxidase 5 acyl-CoA oxidase 5 0.61 0.34 -0.29
35 AT1G05070 Protein of unknown function (DUF1068) -0.61 0.34 -0.31
36 AT1G02740 MRG family protein -0.6 0.34 -0.31
37 AT5G12260 BEST Arabidopsis thaliana protein match is:
glycosyltransferase family protein 2 (TAIR:AT5G60700.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 -0.6 0.32 -0.34
38 AT5G27150 Na+/H+ exchanger 1 AT-NHX1, ATNHX, ATNHX1, Na+/H+
exchanger 1		 0.6 0.32 -0.3
39 AT2G33990 IQ-domain 9 IQ-domain 9 -0.6 0.3 -0.31
40 AT3G27810 myb domain protein 21 myb domain protein 21, ARABIDOPSIS
THALIANA MYB DOMAIN PROTEIN 3,
myb domain protein 21		 0.6 0.31 -0.3
41 AT3G04605 transposable element gene 0.6 0.33 -0.32
42 AT3G44900 cation/H+ exchanger 4 cation/H+ exchanger 4, cation/H+
exchanger 4		 0.6 0.29 -0.29
43 ATMG00070 NADH dehydrogenase subunit 9 NADH dehydrogenase subunit 9 0.6 0.31 -0.31
44 AT5G19790 related to AP2 11 related to AP2 11 -0.59 0.3 -0.31
45 AT4G36790 Major facilitator superfamily protein -0.59 0.3 -0.31
46 AT3G08630 Protein of unknown function (DUF3411) -0.59 0.3 -0.32
47 AT1G06520 glycerol-3-phosphate acyltransferase 1 ATGPAT1, glycerol-3-phosphate
acyltransferase 1		 0.59 0.3 -0.31
48 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 0.59 0.31 -0.35
49 AT5G57530 xyloglucan endotransglucosylase/hydrolase 12 AtXTH12, xyloglucan
endotransglucosylase/hydrolase 12		 -0.59 0.31 -0.32
50 AT4G16515 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 6 -0.59 0.33 -0.32
51 AT3G30650 transposable element gene 0.59 0.31 -0.34
52 AT2G36010 E2F transcription factor 3 ATE2FA, E2F transcription factor 3 -0.59 0.32 -0.32
53 AT2G24970 unknown protein; Has 33 Blast hits to 33 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.59 0.33 -0.31
54 AT5G56130 Transducin/WD40 repeat-like superfamily protein AtTEX1, TEX1, THO3 -0.58 0.32 -0.32
55 AT4G29250 HXXXD-type acyl-transferase family protein 0.58 0.32 -0.32
56 AT1G35183 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.3 -0.32
57 AT1G07360 CCCH-type zinc fingerfamily protein with RNA-binding domain MOS4-associated complex subunit 5A -0.58 0.32 -0.29
58 AT3G04690 Malectin/receptor-like protein kinase family protein ANXUR1 -0.58 0.32 -0.32
59 AT2G17845 NAD(P)-binding Rossmann-fold superfamily protein 0.58 0.33 -0.31
60 AT1G78100 F-box family protein auxin up-regulated f-box protein 1 -0.58 0.31 -0.31
61 AT2G21000 transposable element gene -0.58 0.3 -0.31
62 AT4G40050 Protein of unknown function (DUF3550/UPF0682) 0.58 0.32 -0.32
63 AT2G25760 Protein kinase family protein 0.57 0.31 -0.31
64 AT1G28570 SGNH hydrolase-type esterase superfamily protein 0.57 0.31 -0.3
65 AT5G35470 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.57 0.31 -0.3
66 AT4G19185 nodulin MtN21 /EamA-like transporter family protein -0.57 0.33 -0.29
67 AT5G02190 Eukaryotic aspartyl protease family protein ARABIDOPSIS THALIANA ASPARTIC
PROTEASE 38, EMBRYO DEFECTIVE 24,
PROMOTION OF CELL SURVIVAL 1		 -0.57 0.31 -0.31
68 AT2G32850 Protein kinase superfamily protein 0.57 0.31 -0.33
69 AT5G54250 cyclic nucleotide-gated cation channel 4 cyclic nucleotide-gated cation
channel 4, cyclic nucleotide-gated
cation channel 4, DEFENSE, NO
DEATH 2, HLM1		 0.57 0.31 -0.3
70 AT4G40000 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.57 0.32 -0.31
71 AT5G19800 hydroxyproline-rich glycoprotein family protein -0.57 0.29 -0.29
72 AT3G43730 transposable element gene 0.57 0.3 -0.31
73 AT1G33800 Protein of unknown function (DUF579) -0.56 0.31 -0.34
74 AT4G12110 sterol-4alpha-methyl oxidase 1-1 ATSMO1-1, sterol-4alpha-methyl
oxidase 1-1		 -0.56 0.32 -0.33
75 AT3G16090 RING/U-box superfamily protein homolog of yeast Hrd1, homolog of
yeast Hrd1		 0.56 0.33 -0.31
76 AT5G35190 proline-rich extensin-like family protein extensin 13 -0.56 0.32 -0.32
77 AT4G30320 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.56 0.32 -0.3
78 AT5G07000 sulfotransferase 2B ARABIDOPSIS THALIANA
SULFOTRANSFERASE 2B,
sulfotransferase 2B		 -0.56 0.31 -0.32
79 AT4G01790 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.56 0.31 -0.31
80 AT4G37780 myb domain protein 87 ATMYB87, myb domain protein 87 -0.56 0.31 -0.32
81 AT3G07600 Heavy metal transport/detoxification superfamily protein -0.56 0.31 -0.31
82 AT1G35570 transposable element gene 0.56 0.31 -0.33
83 AT4G38640 Plasma-membrane choline transporter family protein 0.55 0.32 -0.32
84 AT1G52660 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.55 0.31 -0.35
85 AT5G54350 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: C2H2-like zinc
finger protein (TAIR:AT5G54360.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.55 0.34 -0.31
86 AT2G18970 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.55 0.33 -0.32
87 AT4G00460 RHO guanyl-nucleotide exchange factor 3 ATROPGEF3, RHO guanyl-nucleotide
exchange factor 3		 -0.55 0.32 -0.29
88 AT5G33300 chromosome-associated kinesin-related -0.55 0.33 -0.31
89 AT3G42330 transposable element gene 0.55 0.31 -0.33
90 AT5G13990 exocyst subunit exo70 family protein C2 exocyst subunit exo70 family
protein C2, exocyst subunit exo70
family protein C2		 -0.55 0.29 -0.32
91 AT4G15460 glycine-rich protein 0.55 0.32 -0.3
92 AT5G18560 Integrase-type DNA-binding superfamily protein PUCHI -0.55 0.31 -0.32
93 AT1G32040 transposable element gene -0.54 0.31 -0.34
94 AT2G18060 vascular related NAC-domain protein 1 Arabidopsis NAC domain containing
protein 37, vascular related
NAC-domain protein 1		 -0.54 0.32 -0.31
95 AT1G09170 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 -0.54 0.3 -0.33
96 AT2G18010 SAUR-like auxin-responsive protein family -0.54 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
97 C0151 Monogalactosyldiacylgycerol-34:4 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.73 0.5 -0.51 C0151
98 C0199 Phosphatidylethanolamine-36:6 - Phosphatidylethanolamine-36:6 phospholipid biosynthesis II,
linoleate biosynthesis I,
phosphatidylethanolamine biosynthesis I,
phosphatidylethanolamine biosynthesis II,
glutathione redox reactions I 		-0.7 0.47 -0.51 C0199
99 C0083 Digalactosyldiacylglycerol-36:4 - Digalactosyldiacylglycerol-36:4 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.69 0.51 -0.49 C0083
100 C0211 PR_MST_2158.8 - - - 0.67 0.41 -0.46
101 C0035 4-Methoxyindol-3-ylmethylglucosinolate - 4-Methoxy-3-indolylmethyl glucosinolate glucosinolate biosynthesis from tryptophan,
indole glucosinolate breakdown (active in intact plant cell) 		-0.63 0.46 -0.44 C0035