AGICode | AT3G28910 |
Description | myb domain protein 30 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G28910 | myb domain protein 30 | ATMYB30, myb domain protein 30 | 1 | 0.31 | -0.33 | ||
2 | AT5G09800 | ARM repeat superfamily protein | 0.69 | 0.34 | -0.32 | |||
3 | AT4G18340 | Glycosyl hydrolase superfamily protein | 0.69 | 0.3 | -0.31 | |||
4 | AT4G08460 | Protein of unknown function (DUF1644) | 0.68 | 0.3 | -0.31 | |||
5 | AT4G03060 | AOP2 (ALKENYL HYDROXALKYL PRODUCING 2); oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors |
alkenyl hydroxalkyl producing 2 | -0.68 | 0.3 | -0.32 | ||
6 | AT5G66690 | UDP-Glycosyltransferase superfamily protein | UGT72E2 | 0.68 | 0.31 | -0.3 | ||
7 | AT1G02205 | Fatty acid hydroxylase superfamily | ECERIFERUM 1 | -0.67 | 0.31 | -0.32 | ||
8 | AT4G03560 | two-pore channel 1 | CALCIUM CHANNEL 1, two-pore channel 1, FATTY ACID OXYGENATION UPREGULATED 2, TPC1, two-pore channel 1 |
-0.67 | 0.31 | -0.33 | ||
9 | AT1G14740 | Protein of unknown function (DUF1423) | 0.66 | 0.32 | -0.32 | |||
10 | AT1G56080 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 196 Blast hits to 193 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 9; Fungi - 2; Plants - 132; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). |
0.66 | 0.31 | -0.31 | |||
11 | AT5G07250 | RHOMBOID-like protein 3 | RHOMBOID-like protein 3, RHOMBOID-like protein 3 |
-0.66 | 0.32 | -0.31 | ||
12 | AT2G43800 | Actin-binding FH2 (formin homology 2) family protein | -0.66 | 0.32 | -0.3 | |||
13 | AT5G37360 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.65 | 0.31 | -0.29 | |||
14 | AT4G04970 | glucan synthase-like 1 | GLUCAN SYNTHASE LIKE 1, GLUCAN SYNTHASE LIKE-1, GSL01, glucan synthase-like 1 |
-0.65 | 0.31 | -0.3 | ||
15 | AT5G42720 | Glycosyl hydrolase family 17 protein | -0.65 | 0.3 | -0.31 | |||
16 | AT1G17860 | Kunitz family trypsin and protease inhibitor protein | 0.65 | 0.33 | -0.31 | |||
17 | AT5G40250 | RING/U-box superfamily protein | 0.64 | 0.32 | -0.32 | |||
18 | AT1G01520 | Homeodomain-like superfamily protein | ALTERED SEED GERMINATION 4 | -0.64 | 0.34 | -0.33 | ||
19 | AT1G71050 | Heavy metal transport/detoxification superfamily protein | heavy metal associated isoprenylated plant protein 20 |
-0.64 | 0.3 | -0.31 | ||
20 | AT2G37430 | C2H2 and C2HC zinc fingers superfamily protein | 0.64 | 0.3 | -0.32 | |||
21 | AT1G55460 | DNA/RNA-binding protein Kin17, conserved region | -0.63 | 0.31 | -0.32 | |||
22 | AT1G73750 | Uncharacterised conserved protein UCP031088, alpha/beta hydrolase |
-0.63 | 0.31 | -0.33 | |||
23 | AT3G54770 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.62 | 0.33 | -0.32 | |||
24 | AT2G20460 | transposable element gene | -0.62 | 0.32 | -0.33 | |||
25 | AT5G16150 | plastidic GLC translocator | GLUCOSE TRANSPORTER 1, plastidic GLC translocator |
-0.62 | 0.34 | -0.28 | ||
26 | AT2G34840 | Coatomer epsilon subunit | -0.61 | 0.3 | -0.33 | |||
27 | AT5G54930 | AT hook motif-containing protein | 0.61 | 0.32 | -0.32 | |||
28 | AT4G16850 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.61 | 0.32 | -0.34 | |||
29 | AT2G01820 | Leucine-rich repeat protein kinase family protein | -0.6 | 0.33 | -0.3 | |||
30 | AT1G05410 | Protein of unknown function (DUF1423) | 0.6 | 0.31 | -0.31 | |||
31 | AT5G06560 | Protein of unknown function, DUF593 | 0.6 | 0.33 | -0.32 | |||
32 | AT4G14410 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
basic Helix-Loop-Helix 104 | 0.6 | 0.34 | -0.31 | ||
33 | AT1G24150 | formin homologue 4 | FORMIN HOMOLOGUE 4, formin homologue 4 |
0.59 | 0.3 | -0.31 | ||
34 | AT5G13050 | 5-formyltetrahydrofolate cycloligase | 5-formyltetrahydrofolate cycloligase |
-0.58 | 0.3 | -0.31 | ||
35 | AT1G58270 | TRAF-like family protein | ZW9 | -0.58 | 0.32 | -0.31 | ||
36 | AT4G03205 | Coproporphyrinogen III oxidase | hemf2 | -0.58 | 0.31 | -0.33 | ||
37 | AT1G50610 | Leucine-rich repeat protein kinase family protein | -0.58 | 0.3 | -0.32 | |||
38 | AT1G59520 | CW7 | CW7 | -0.58 | 0.32 | -0.33 | ||
39 | AT1G50440 | RING/FYVE/PHD zinc finger superfamily protein | -0.57 | 0.32 | -0.32 | |||
40 | AT5G39790 | 5'-AMP-activated protein kinase-related | -0.57 | 0.31 | -0.34 | |||
41 | AT5G51470 | Auxin-responsive GH3 family protein | 0.57 | 0.31 | -0.32 | |||
42 | AT5G16950 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.57 | 0.29 | -0.33 | |||
43 | AT3G04160 | unknown protein; Has 1711 Blast hits to 1353 proteins in 195 species: Archae - 0; Bacteria - 64; Metazoa - 693; Fungi - 201; Plants - 207; Viruses - 0; Other Eukaryotes - 546 (source: NCBI BLink). |
-0.57 | 0.33 | -0.33 | |||
44 | AT4G39560 | Galactose oxidase/kelch repeat superfamily protein | -0.57 | 0.3 | -0.32 | |||
45 | AT2G29650 | phosphate transporter 4;1 | anion transporter 1, phosphate transporter 4;1 |
-0.57 | 0.31 | -0.29 | ||
46 | AT4G09950 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.56 | 0.31 | -0.32 | |||
47 | AT5G46190 | RNA-binding KH domain-containing protein | -0.56 | 0.31 | -0.32 | |||
48 | AT4G19500 | nucleoside-triphosphatases;transmembrane receptors;nucleotide binding;ATP binding |
-0.56 | 0.3 | -0.3 | |||
49 | AT5G20070 | nudix hydrolase homolog 19 | ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 19, nudix hydrolase homolog 19, nudix hydrolase homolog 19 |
-0.56 | 0.31 | -0.32 | ||
50 | AT5G23890 | LOCATED IN: mitochondrion, chloroplast thylakoid membrane, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.56 | 0.31 | -0.33 | |||
51 | AT4G22490 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.55 | 0.3 | -0.31 | |||
52 | AT1G51440 | alpha/beta-Hydrolases superfamily protein | -0.55 | 0.31 | -0.3 | |||
53 | AT5G47000 | Peroxidase superfamily protein | 0.54 | 0.31 | -0.31 | |||
54 | AT5G10220 | annexin 6 | annexin 6, ANNEXIN ARABIDOPSIS THALIANA 6 |
0.54 | 0.31 | -0.29 | ||
55 | AT3G27660 | oleosin 4 | OLEOSIN 3, oleosin 4 | -0.54 | 0.32 | -0.32 | ||
56 | AT5G04770 | cationic amino acid transporter 6 | ARABIDOPSIS THALIANA CATIONIC AMINO ACID TRANSPORTER 6, cationic amino acid transporter 6 |
0.54 | 0.31 | -0.31 | ||
57 | AT2G29080 | FTSH protease 3 | FTSH protease 3 | -0.53 | 0.31 | -0.33 | ||
58 | AT2G16230 | O-Glycosyl hydrolases family 17 protein | 0.53 | 0.29 | -0.32 | |||
59 | AT3G50720 | Protein kinase superfamily protein | -0.53 | 0.32 | -0.3 | |||
60 | AT4G08110 | transposable element gene | -0.53 | 0.31 | -0.32 | |||
61 | AT5G40500 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.53 | 0.3 | -0.3 | |||
62 | AT5G16270 | sister chromatid cohesion 1 protein 4 | ARABIDOPSIS HOMOLOG OF RAD21 3, sister chromatid cohesion 1 protein 4 |
-0.53 | 0.29 | -0.31 | ||
63 | AT1G14920 | GRAS family transcription factor family protein | GIBBERELLIC ACID INSENSITIVE, RESTORATION ON GROWTH ON AMMONIA 2 |
-0.53 | 0.32 | -0.3 | ||
64 | AT1G49630 | presequence protease 2 | presequence protease 2, presequence protease 2 |
-0.53 | 0.3 | -0.32 | ||
65 | AT3G26310 | cytochrome P450, family 71, subfamily B, polypeptide 35 | cytochrome P450, family 71, subfamily B, polypeptide 35 |
-0.53 | 0.33 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
66 | C0030 | 3-Methylsulfinyl-n-propylglucosinolate | - | 3-Methylsulfinylpropyl-glucosinolate | glucosinolate biosynthesis from homomethionine | -0.74 | 0.42 | -0.46 | ||
67 | C0234 | Sinapoyl glucose | 1-O-Sinapoyl-β-D-glucose | 1-O-Sinapoyl-β-D-glucose | sinapate ester biosynthesis | -0.72 | 0.43 | -0.44 | ||
68 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | -0.69 | 0.41 | -0.46 | ||
69 | C0094 | Galactosamine | D-Galactosamine | - | - | -0.65 | 0.48 | -0.42 | ||
70 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
-0.6 | 0.46 | -0.46 | ||
71 | C0040 | 6-Methylsulfinyl-n-hexylglucosinolate | - | 6-Methylsulfinylhexyl glucosinolate | glucosinolate biosynthesis from tetrahomomethionine | -0.55 | 0.31 | -0.33 |