AT3G28040 : -
Query Information
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AGICode AT3G28040
Description Leucine-rich receptor-like protein kinase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G28040 Leucine-rich receptor-like protein kinase family protein 1 0.31 -0.31
2 AT5G10690 pentatricopeptide (PPR) repeat-containing protein / CBS
domain-containing protein		 0.9 0.34 -0.32
3 AT3G59040 Tetratricopeptide repeat (TPR)-like superfamily protein 0.9 0.32 -0.3
4 AT4G34830 Pentatricopeptide repeat (PPR) superfamily protein MATURATION OF RBCL 1, PIGMENT
DEFECTIVE 346		 0.89 0.33 -0.33
5 AT5G64620 cell wall / vacuolar inhibitor of fructosidase 2 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 2, cell wall /
vacuolar inhibitor of fructosidase
2		 0.88 0.32 -0.31
6 AT2G35155 Trypsin family protein 0.88 0.31 -0.29
7 AT5G50280 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1006 0.88 0.31 -0.32
8 AT1G09750 Eukaryotic aspartyl protease family protein 0.88 0.31 -0.3
9 AT3G14330 Tetratricopeptide repeat (TPR)-like superfamily protein 0.88 0.3 -0.3
10 AT2G06520 photosystem II subunit X photosystem II subunit X 0.88 0.33 -0.31
11 AT3G06980 DEA(D/H)-box RNA helicase family protein 0.88 0.32 -0.33
12 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.88 0.3 -0.31
13 AT5G55740 Tetratricopeptide repeat (TPR)-like superfamily protein chlororespiratory reduction 21 0.87 0.32 -0.33
14 AT1G26230 TCP-1/cpn60 chaperonin family protein chaperonin-60beta4 0.87 0.32 -0.31
15 AT1G26570 UDP-glucose dehydrogenase 1 UDP-GLUCOSE DEHYDROGENASE 1,
UDP-glucose dehydrogenase 1		 0.87 0.32 -0.3
16 AT1G31330 photosystem I subunit F photosystem I subunit F 0.87 0.31 -0.32
17 AT3G04260 plastid transcriptionally active 3 PIGMENT DEFECTIVE 324, plastid
transcriptionally active 3		 0.87 0.34 -0.32
18 AT2G28605 Photosystem II reaction center PsbP family protein 0.87 0.3 -0.31
19 AT4G22530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.87 0.29 -0.31
20 AT3G45010 serine carboxypeptidase-like 48 serine carboxypeptidase-like 48 -0.87 0.33 -0.33
21 AT4G14890 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 2 0.87 0.32 -0.31
22 AT4G24670 tryptophan aminotransferase related 2 tryptophan aminotransferase
related 2		 0.87 0.31 -0.3
23 AT2G47450 chloroplast signal recognition particle component (CAO) CHAOS, CHLOROPLAST SIGNAL
RECOGNITION PARTICLE 43		 0.86 0.32 -0.32
24 AT1G31920 Tetratricopeptide repeat (TPR)-like superfamily protein 0.86 0.33 -0.32
25 AT5G14100 non-intrinsic ABC protein 14 ATP-binding cassette I11,
ARABIDOPSIS THALIANANON-INTRINSIC
ABC PROTEIN 14, non-intrinsic ABC
protein 14		 0.86 0.31 -0.33
26 AT4G00950 Protein of unknown function (DUF688) maternal effect embryo arrest 47 0.86 0.34 -0.32
27 AT4G13180 NAD(P)-binding Rossmann-fold superfamily protein -0.86 0.3 -0.32
28 AT5G40150 Peroxidase superfamily protein 0.86 0.32 -0.31
29 AT3G61150 homeodomain GLABROUS 1 HOMEODOMAIN-GLABRA2 1, homeodomain
GLABROUS 1		 0.86 0.29 -0.31
30 AT4G26060 Ribosomal protein L18ae family -0.86 0.33 -0.31
31 AT3G14990 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog A, DJ-1 homolog A -0.86 0.33 -0.31
32 AT5G63050 embryo defective 2759 embryo defective 2759 0.86 0.32 -0.31
33 AT1G51570 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 0.86 0.31 -0.35
34 AT5G10910 mraW methylase family protein 0.85 0.32 -0.3
35 AT2G34640 plastid transcriptionally active 12 HEMERA, plastid transcriptionally
active 12		 0.85 0.3 -0.33
36 AT5G42130 Mitochondrial substrate carrier family protein AtMfl1, MitoFerrinLike1 0.85 0.31 -0.33
37 AT2G26910 pleiotropic drug resistance 4 ATP-binding cassette G32,
PLEIOTROPIC DRUG RESISTANCE 4,
pleiotropic drug resistance 4,
PERMEABLE CUTICLE 1		 0.85 0.3 -0.3
38 AT4G37370 cytochrome P450, family 81, subfamily D, polypeptide 8 cytochrome P450, family 81,
subfamily D, polypeptide 8		 -0.85 0.31 -0.3
39 AT4G34220 Leucine-rich repeat protein kinase family protein 0.85 0.32 -0.31
40 AT4G21190 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1417 0.85 0.31 -0.33
41 AT3G55430 O-Glycosyl hydrolases family 17 protein -0.85 0.32 -0.31
42 AT5G18460 Protein of Unknown Function (DUF239) 0.85 0.31 -0.32
43 AT2G41980 Protein with RING/U-box and TRAF-like domains 0.85 0.31 -0.33
44 AT4G21750 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 MERISTEM LAYER 1 0.85 0.32 -0.32
45 AT4G04890 protodermal factor 2 protodermal factor 2 0.84 0.31 -0.32
46 AT4G39330 cinnamyl alcohol dehydrogenase 9 ATCAD9, cinnamyl alcohol
dehydrogenase 9		 0.84 0.29 -0.31
47 AT3G18110 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 1270 0.84 0.31 -0.31
48 AT5G67600 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 WINDHOSE 1 -0.84 0.32 -0.31
49 AT4G27240 zinc finger (C2H2 type) family protein 0.84 0.32 -0.33
50 AT5G19440 NAD(P)-binding Rossmann-fold superfamily protein -0.84 0.3 -0.31
51 AT1G55130 Endomembrane protein 70 protein family AtTMN6, transmembrane nine 6 0.84 0.33 -0.31
52 AT5G13630 magnesium-chelatase subunit chlH, chloroplast, putative /
Mg-protoporphyrin IX chelatase, putative (CHLH)		 ABA-BINDING PROTEIN, CONDITIONAL
CHLORINA, CCH1, H SUBUNIT OF
MG-CHELATASE, GENOMES UNCOUPLED 5		 0.84 0.33 -0.32
53 AT1G66970 SHV3-like 2 Glycerophosphodiester
phosphodiesterase (GDPD) like 1,
SHV3-like 2		 0.84 0.3 -0.3
54 AT1G17200 Uncharacterised protein family (UPF0497) 0.84 0.31 -0.32
55 AT1G14130 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.84 0.32 -0.3
56 AT2G42320 nucleolar protein gar2-related 0.84 0.33 -0.34
57 AT2G26640 3-ketoacyl-CoA synthase 11 3-ketoacyl-CoA synthase 11 0.84 0.29 -0.3
58 AT4G37800 xyloglucan endotransglucosylase/hydrolase 7 xyloglucan
endotransglucosylase/hydrolase 7		 0.84 0.31 -0.32
59 AT5G06750 Protein phosphatase 2C family protein -0.84 0.29 -0.32
60 AT4G24160 alpha/beta-Hydrolases superfamily protein -0.84 0.33 -0.32
61 AT3G48200 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 210 Blast hits to
148 proteins in 42 species: Archae - 0; Bacteria - 118;
Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other
Eukaryotes - 44 (source: NCBI BLink).		 0.84 0.34 -0.32
62 AT4G25990 CCT motif family protein CIL 0.84 0.31 -0.3
63 AT5G14090 unknown protein; Has 56 Blast hits to 56 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 46; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 0.83 0.32 -0.33
64 AT1G02400 gibberellin 2-oxidase 6 Arabidopsis thaliana gibberellin
2-oxidase 4, ARABIDOPSIS THALIANA
GIBBERELLIN 2-OXIDASE 6,
DOWNSTREAM TARGET OF AGL15 1,
gibberellin 2-oxidase 6		 -0.83 0.3 -0.29
65 AT3G49670 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 2 0.83 0.33 -0.34
66 AT2G39930 isoamylase 1 ARABIDOPSIS THALIANA ISOAMYLASE 1,
isoamylase 1		 0.83 0.31 -0.31
67 AT1G14380 IQ-domain 28 IQ-domain 28 0.83 0.33 -0.33
68 AT4G31860 Protein phosphatase 2C family protein -0.83 0.31 -0.3
69 AT4G20830 FAD-binding Berberine family protein -0.83 0.31 -0.31
70 AT2G29420 glutathione S-transferase tau 7 glutathione S-transferase tau 7,
GLUTATHIONE S-TRANSFERASE 25,
glutathione S-transferase tau 7		 -0.83 0.3 -0.33
71 AT1G48460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.83 0.31 -0.32
72 AT2G36430 Plant protein of unknown function (DUF247) 0.83 0.31 -0.31
73 AT2G26250 3-ketoacyl-CoA synthase 10 FIDDLEHEAD, 3-ketoacyl-CoA
synthase 10		 0.83 0.31 -0.32
74 AT2G21210 SAUR-like auxin-responsive protein family 0.83 0.31 -0.33
75 AT3G56330 N2,N2-dimethylguanosine tRNA methyltransferase 0.83 0.31 -0.31
76 AT1G60600 UbiA prenyltransferase family protein ABERRANT CHLOROPLAST DEVELOPMENT 4 0.83 0.31 -0.3
77 AT1G13195 RING/U-box superfamily protein -0.83 0.3 -0.3
78 AT5G07900 Mitochondrial transcription termination factor family
protein		 0.83 0.33 -0.33
79 AT2G44670 Protein of unknown function (DUF581) 0.83 0.3 -0.35
80 AT2G47240 AMP-dependent synthetase and ligase family protein ECERIFERUM 8, LONG-CHAIN ACYL-COA
SYNTHASE 1		 0.83 0.3 -0.32
81 AT5G08000 glucan endo-1,3-beta-glucosidase-like protein 3 glucan
endo-1,3-beta-glucosidase-like
protein 3, PLASMODESMATA
CALLOSE-BINDING PROTEIN 2		 0.83 0.33 -0.31
82 AT4G28080 Tetratricopeptide repeat (TPR)-like superfamily protein 0.83 0.31 -0.31
83 AT5G63970 Copine (Calcium-dependent phospholipid-binding protein)
family		 -0.82 0.32 -0.33
84 AT3G53160 UDP-glucosyl transferase 73C7 UDP-glucosyl transferase 73C7 -0.82 0.32 -0.33
85 AT5G64250 Aldolase-type TIM barrel family protein -0.81 0.32 -0.32
86 AT1G72680 cinnamyl-alcohol dehydrogenase CINNAMYL ALCOHOL DEHYDROGENASE 1,
cinnamyl-alcohol dehydrogenase		 -0.81 0.32 -0.33
87 AT5G39050 HXXXD-type acyl-transferase family protein phenolic glucoside
malonyltransferase 1		 -0.81 0.35 -0.31
88 AT1G76070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 8 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G20310.1); Has 66 Blast hits to 66 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.81 0.29 -0.33
89 AT1G25500 Plasma-membrane choline transporter family protein -0.81 0.31 -0.34
90 AT3G44190 FAD/NAD(P)-binding oxidoreductase family protein -0.8 0.31 -0.31
91 AT1G53030 Cytochrome C oxidase copper chaperone (COX17) -0.8 0.3 -0.3
92 AT2G29440 glutathione S-transferase tau 6 glutathione S-transferase tau 6,
GLUTATHIONE S-TRANSFERASE 24,
glutathione S-transferase tau 6		 -0.8 0.29 -0.3
93 AT1G17170 glutathione S-transferase TAU 24 glutathione S-transferase TAU 24,
Arabidopsis thaliana Glutathione
S-transferase (class tau) 24,
glutathione S-transferase TAU 24		 -0.8 0.32 -0.31
94 AT5G63790 NAC domain containing protein 102 NAC domain containing protein 102,
NAC domain containing protein 102		 -0.8 0.3 -0.32
95 AT1G21450 SCARECROW-like 1 SCARECROW-like 1 -0.8 0.32 -0.31
96 AT5G18270 Arabidopsis NAC domain containing protein 87 Arabidopsis NAC domain containing
protein 87		 -0.8 0.3 -0.31
97 AT1G66760 MATE efflux family protein -0.8 0.31 -0.34
98 AT5G59510 ROTUNDIFOLIA like 5 DEVIL 18, ROTUNDIFOLIA like 5 -0.8 0.32 -0.31
99 AT1G68140 Protein of unknown function (DUF1644) -0.8 0.31 -0.32
100 AT4G05020 NAD(P)H dehydrogenase B2 NAD(P)H dehydrogenase B2 -0.8 0.31 -0.32
101 AT2G15480 UDP-glucosyl transferase 73B5 UDP-glucosyl transferase 73B5 -0.8 0.3 -0.32
102 AT2G15490 UDP-glycosyltransferase 73B4 UDP-glycosyltransferase 73B4 -0.8 0.32 -0.33
103 AT2G29990 alternative NAD(P)H dehydrogenase 2 alternative NAD(P)H dehydrogenase
2		 -0.79 0.32 -0.3
104 AT3G13310 Chaperone DnaJ-domain superfamily protein -0.79 0.31 -0.34
105 AT1G62760 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.79 0.33 -0.32
106 AT2G26300 G protein alpha subunit 1 ARABIDOPSIS THALIANA G PROTEIN
ALPHA SUBUNIT 1, G protein alpha
subunit 1, G PROTEIN ALPHA SUBUNIT
1		 -0.79 0.32 -0.32
107 AT1G64610 Transducin/WD40 repeat-like superfamily protein -0.79 0.31 -0.32
108 AT2G37970 SOUL heme-binding family protein SOUL-1 -0.79 0.32 -0.33
109 AT5G63450 cytochrome P450, family 94, subfamily B, polypeptide 1 cytochrome P450, family 94,
subfamily B, polypeptide 1		 -0.79 0.33 -0.31
110 AT2G29490 glutathione S-transferase TAU 1 glutathione S-transferase TAU 1,
GLUTATHIONE S-TRANSFERASE 19,
glutathione S-transferase TAU 1		 -0.79 0.32 -0.29
111 AT3G48520 cytochrome P450, family 94, subfamily B, polypeptide 3 cytochrome P450, family 94,
subfamily B, polypeptide 3		 -0.79 0.31 -0.33
112 AT3G53480 pleiotropic drug resistance 9 ATP-binding cassette G37,
PLEIOTROPIC DRUG RESISTANCE 9,
pleiotropic drug resistance 9,
polar auxin transport inhibitor
sensitive 1		 -0.79 0.29 -0.34
113 AT1G50570 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.78 0.3 -0.32
114 AT3G09270 glutathione S-transferase TAU 8 glutathione S-transferase TAU 8,
glutathione S-transferase TAU 8		 -0.78 0.3 -0.31
115 AT1G28190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G12340.1); Has 166 Blast hits
to 162 proteins in 36 species: Archae - 0; Bacteria - 2;
Metazoa - 15; Fungi - 5; Plants - 124; Viruses - 0; Other
Eukaryotes - 20 (source: NCBI BLink).		 -0.78 0.31 -0.31
116 AT4G30210 P450 reductase 2 AR2, P450 reductase 2 -0.78 0.32 -0.32
117 AT5G57910 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.78 0.32 -0.3
118 AT4G33780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; BEST Arabidopsis thaliana protein match is:
short hypocotyl in white light1 (TAIR:AT1G69935.1); Has 40
Blast hits to 40 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.31 -0.31
119 AT1G08720 Protein kinase superfamily protein ATEDR1, ENHANCED DISEASE
RESISTANCE 1		 -0.78 0.31 -0.31
120 AT3G61930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion stage;
Has 11 Blast hits to 11 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.34 -0.31
121 AT5G54860 Major facilitator superfamily protein -0.78 0.31 -0.29
122 AT1G23440 Peptidase C15, pyroglutamyl peptidase I-like -0.78 0.29 -0.31
123 AT2G26230 uricase / urate oxidase / nodulin 35, putative -0.77 0.32 -0.32
124 AT5G51040 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF339 (InterPro:IPR005631); Has 532 Blast
hits to 532 proteins in 207 species: Archae - 0; Bacteria -
285; Metazoa - 16; Fungi - 41; Plants - 40; Viruses - 0;
Other Eukaryotes - 150 (source: NCBI BLink).		 -0.77 0.32 -0.32
125 AT3G03640 beta glucosidase 25 beta glucosidase 25, GLUC -0.77 0.32 -0.31
126 AT2G01470 SEC12P-like 2 protein ATSEC12, SEC12P-like 2 protein -0.77 0.31 -0.31
127 AT3G27880 Protein of unknown function (DUF1645) -0.77 0.32 -0.31
128 AT5G26340 Major facilitator superfamily protein SUGAR TRANSPORT PROTEIN 13, MSS1,
SUGAR TRANSPORT PROTEIN 13		 -0.77 0.32 -0.31
129 AT1G60730 NAD(P)-linked oxidoreductase superfamily protein -0.77 0.31 -0.33
130 AT5G26030 ferrochelatase 1 ATFC-I, FC-I, ferrochelatase 1 -0.76 0.33 -0.32
131 AT2G17500 Auxin efflux carrier family protein -0.76 0.33 -0.3
132 AT3G61980 serine protease inhibitor, Kazal-type family protein -0.76 0.31 -0.32
133 AT2G39725 LYR family of Fe/S cluster biogenesis protein -0.76 0.3 -0.31
134 AT5G63880 SNF7 family protein VPS20.1 -0.76 0.34 -0.32
135 AT1G69890 Protein of unknown function (DUF569) -0.76 0.32 -0.32
136 AT2G47730 glutathione S-transferase phi 8 GLUTATHIONE S-TRANSFERASE (CLASS
PHI) 5, Arabidopsis thaliana
glutathione S-transferase phi 8,
GST6, glutathione S-transferase
phi 8		 -0.76 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
137 C0128 Jasmonic acid (+/-)-Jasmonic acid (+)-Jasmonate; (-)-Jasmonate jasmonic acid biosynthesis -0.84 0.43 -0.45 C0128
138 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.82 0.42 -0.46 C0120
139 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		-0.77 0.44 -0.42 C0220