AT2G43280 : -
Query Information
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AGICode AT2G43280
Description Far-red impaired responsive (FAR1) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G43280 Far-red impaired responsive (FAR1) family protein 1 0.32 -0.31
2 AT5G67260 CYCLIN D3;2 CYCLIN D3;2 0.75 0.32 -0.32
3 AT2G46370 Auxin-responsive GH3 family protein FAR-RED INSENSITIVE 219, JASMONATE
RESISTANT 1		 -0.68 0.29 -0.3
4 AT3G54010 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 DEI1, PASTICCINO 1 -0.68 0.32 -0.34
5 AT5G44740 Y-family DNA polymerase H Y-family DNA polymerase H 0.67 0.31 -0.31
6 AT4G37280 MRG family protein 0.67 0.31 -0.29
7 AT1G10880 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.66 0.3 -0.33
8 AT3G30190 transposable element gene -0.65 0.32 -0.32
9 AT3G25260 Major facilitator superfamily protein -0.63 0.29 -0.29
10 AT3G20950 cytochrome P450, family 705, subfamily A, polypeptide 32 cytochrome P450, family 705,
subfamily A, polypeptide 32		 0.63 0.29 -0.29
11 AT5G41330 BTB/POZ domain with WD40/YVTN repeat-like protein -0.62 0.33 -0.32
12 AT4G24050 NAD(P)-binding Rossmann-fold superfamily protein 0.62 0.3 -0.3
13 AT5G59030 copper transporter 1 copper transporter 1 0.62 0.33 -0.32
14 AT5G45320 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: inflorescence meristem, root, flower;
EXPRESSED DURING: petal differentiation and expansion
stage; CONTAINS InterPro DOMAIN/s: Late embryogenesis
abundant protein, group 2 (InterPro:IPR004864); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G26350.1); Has 253 Blast hits to 253 proteins in
16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 253; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.31 -0.34
15 AT5G28560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; Has 0 Blast hits to 0 proteins in 0 species
(source: NCBI BLink).		 0.62 0.34 -0.3
16 AT4G11050 glycosyl hydrolase 9C3 glycosyl hydrolase 9C3, glycosyl
hydrolase 9C3		 0.62 0.3 -0.33
17 AT4G18593 dual specificity protein phosphatase-related 0.61 0.31 -0.33
18 AT2G36400 growth-regulating factor 3 growth-regulating factor 3,
growth-regulating factor 3		 0.61 0.32 -0.33
19 AT4G05550 transposable element gene 0.61 0.33 -0.29
20 AT3G12820 myb domain protein 10 myb domain protein 10, myb domain
protein 10		 0.6 0.29 -0.31
21 AT5G06510 nuclear factor Y, subunit A10 nuclear factor Y, subunit A10 -0.6 0.32 -0.3
22 AT1G49790 F-box associated ubiquitination effector family protein 0.6 0.31 -0.32
23 AT3G12960 unknown protein; Has 44 Blast hits to 44 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.32 -0.31
24 AT3G44000 transposable element gene 0.59 0.32 -0.29
25 AT1G36020 BEST Arabidopsis thaliana protein match is: DEAD/DEAH box
RNA helicase family protein (TAIR:AT1G35530.1); Has 18
Blast hits to 18 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.31 -0.31
26 AT3G30230 myosin heavy chain-related 0.59 0.33 -0.3
27 AT3G48370 transposable element gene 0.58 0.28 -0.32
28 AT2G46980 unknown protein; Has 1165 Blast hits to 947 proteins in 158
species: Archae - 0; Bacteria - 33; Metazoa - 631; Fungi -
90; Plants - 54; Viruses - 14; Other Eukaryotes - 343
(source: NCBI BLink).		 -0.58 0.31 -0.31
29 AT5G45260 Disease resistance protein (TIR-NBS-LRR class) ARABIDOPSIS THALIANA WRKY DOMAIN
PROTEIN 52, RESISTANT TO RALSTONIA
SOLANACEARUM 1, SENSITIVE TO LOW
HUMIDITY 1		 -0.58 0.34 -0.32
30 AT4G12540 unknown protein; Has 29 Blast hits to 26 proteins in 11
species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.58 0.3 -0.3
31 AT1G13750 Purple acid phosphatases superfamily protein -0.58 0.3 -0.32
32 AT2G29510 Protein of unknown function (DUF3527) 0.57 0.32 -0.34
33 AT5G16530 Auxin efflux carrier family protein PIN-FORMED 5 0.57 0.32 -0.33
34 AT3G23870 Protein of unknown function (DUF803) -0.57 0.3 -0.3
35 AT1G03180 unknown protein; Has 36 Blast hits to 36 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.33 -0.3
36 AT5G47810 phosphofructokinase 2 phosphofructokinase 2 -0.57 0.34 -0.31
37 AT2G45120 C2H2-like zinc finger protein 0.57 0.31 -0.32
38 AT3G55000 tonneau family protein TONNEAU 1, TONNEAU 1A 0.57 0.31 -0.33
39 AT1G47770 Beta-galactosidase related protein 0.57 0.32 -0.32
40 AT1G15220 cytochrome c biogenesis protein family ATCCMH, CCMH 0.56 0.31 -0.31
41 AT3G43100 transposable element gene -0.56 0.32 -0.33
42 ATMG00890 hypothetical protein ORF106D -0.56 0.32 -0.33
43 AT4G39590 Galactose oxidase/kelch repeat superfamily protein 0.56 0.3 -0.32
44 AT5G28860 transposable element gene 0.56 0.35 -0.32
45 AT3G15150 RING/U-box superfamily protein A. THALIANA METHYL METHANE
SULFONATE SENSITIVITY 21, HIGH
PLOIDY2, METHYL METHANE SULFONATE
SENSITIVITY 2		 0.56 0.33 -0.31
46 AT1G11080 serine carboxypeptidase-like 31 serine carboxypeptidase-like 31 0.56 0.3 -0.3
47 AT5G26890 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.56 0.31 -0.3
48 AT5G07040 RING/U-box superfamily protein 0.56 0.33 -0.31
49 AT3G31940 transposable element gene -0.55 0.31 -0.33
50 AT4G04690 F-box and associated interaction domains-containing protein 0.55 0.31 -0.34
51 AT5G03795 Exostosin family protein 0.55 0.3 -0.3
52 AT5G52620 F-box associated ubiquitination effector family protein 0.55 0.33 -0.33
53 AT4G32030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80610.1); Has 63 Blast hits
to 59 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 6; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.55 0.3 -0.33
54 AT1G48220 Protein kinase superfamily protein -0.55 0.31 -0.31
55 AT2G01500 Homeodomain-like superfamily protein HIGH EXPRESSION OF OSMOTICALLY
RESPONSIVE GENE 9, PRETTY FEW
SEEDS 2, WUSCHEL RELATED HOMEOBOX
6		 -0.55 0.32 -0.3
56 AT1G02680 TBP-associated factor 13 TBP-associated factor 13 0.54 0.31 -0.32
57 AT4G36460 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.31 -0.3
58 AT1G29050 TRICHOME BIREFRINGENCE-LIKE 38 TRICHOME BIREFRINGENCE-LIKE 38 -0.54 0.33 -0.33
59 AT3G18670 Ankyrin repeat family protein 0.54 0.33 -0.34
60 AT4G27890 HSP20-like chaperones superfamily protein 0.54 0.3 -0.31
61 AT3G47420 phosphate starvation-induced gene 3 Glycerol-3-phosphate permease 1,
phosphate starvation-induced gene
3, Glycerol-3-phosphate permease
1, phosphate starvation-induced
gene 3		 -0.54 0.32 -0.3
62 AT1G03750 switch 2 CHROMATIN REMODELING 9 -0.54 0.35 -0.32
63 AT1G43970 unknown protein; Has 10 Blast hits to 8 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.32 -0.32
64 AT1G03540 Pentatricopeptide repeat (PPR-like) superfamily protein 0.54 0.32 -0.32
65 AT2G07728 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cultured cell;
Has 1 Blast hits to 1 proteins in 1 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.32 -0.33
66 AT3G30200 Plant transposase (Ptta/En/Spm family) -0.53 0.29 -0.34
67 AT2G40580 Protein kinase superfamily protein 0.53 0.31 -0.32
68 AT5G03620 Subtilisin-like serine endopeptidase family protein 0.53 0.31 -0.3
69 AT5G46520 Disease resistance protein (TIR-NBS-LRR class) family -0.53 0.31 -0.3
70 AT5G52580 RabGAP/TBC domain-containing protein -0.53 0.32 -0.34
71 AT1G08250 arogenate dehydratase 6 arogenate dehydratase 6,
Arabidopsis thaliana arogenate
dehydratase 6		 -0.53 0.32 -0.33
72 AT1G29180 Cysteine/Histidine-rich C1 domain family protein 0.53 0.34 -0.32
73 AT2G10450 14-3-3 family protein -0.52 0.32 -0.33
74 AT1G73050 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 -0.52 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
75 C0171 MST_2182.9 - - - 0.8 0.48 -0.44
76 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		-0.77 0.45 -0.46 C0105
77 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.74 0.44 -0.49 C0032
78 C0145 Maltotetraose - Maltotetraose starch degradation II -0.73 0.46 -0.47 C0145
79 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) -0.69 0.44 -0.41 C0075
80 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		-0.65 0.44 -0.46 C0053
81 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.64 0.44 -0.42 C0091
82 C0242 Suberic acid - - - 0.64 0.44 -0.49
83 C0052 Adenosine - Adenosine adenine and adenosine salvage VI,
S-adenosyl-L-methionine cycle II,
cytokinins degradation,
methionine degradation I (to homocysteine),
adenine and adenosine salvage II 		-0.61 0.3 -0.31 C0052